RNA–Protein interactions for RNA: ENST00000527599.1

CTNND1-217, Transcript of catenin delta 1, humanhuman

TSL 2

Gene CTNND1, Length 572 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-217ENST00000527599 USP17L1Q7RTZ2 530 aa15.75■□□□□ 0.11
CTNND1-217ENST00000527599 DYRK1BQ9Y463 629 aa15.75■□□□□ 0.11
CTNND1-217ENST00000527599 TLR1Q15399 786 aa15.74■□□□□ 0.11
CTNND1-217ENST00000527599 CDC14CA4D256 554 aa15.73■□□□□ 0.11
CTNND1-217ENST00000527599 PHKA2P46019 1235 aa15.73■□□□□ 0.11
CTNND1-217ENST00000527599 SERTAD1Q9UHV2 236 aa15.73■□□□□ 0.11
CTNND1-217ENST00000527599 C4orf17Q53FE4 359 aa15.72■□□□□ 0.11
CTNND1-217ENST00000527599 TIMMDC1Q9NPL8 285 aa15.72■□□□□ 0.11
CTNND1-217ENST00000527599 TFIP11Q9UBB9 837 aaKnown RBP15.72■□□□□ 0.11
CTNND1-217ENST00000527599 TMEM214Q6NUQ4 689 aaKnown RBP15.71■□□□□ 0.11
CTNND1-217ENST00000527599 PPARGC1BQ86YN6 1023 aaKnown RBP15.71■□□□□ 0.11
CTNND1-217ENST00000527599 SLC4A9Q96Q91 983 aa15.71■□□□□ 0.11
CTNND1-217ENST00000527599 ZBTB7BO15156 539 aaPredicted RBP15.7■□□□□ 0.1
CTNND1-217ENST00000527599 SMTNP53814 917 aa15.7■□□□□ 0.1
CTNND1-217ENST00000527599 DBN1Q16643 649 aa15.7■□□□□ 0.1
CTNND1-217ENST00000527599 RNFT1Q5M7Z0 435 aa15.7■□□□□ 0.1
CTNND1-217ENST00000527599 SV2AQ7L0J3 742 aa15.7■□□□□ 0.1
CTNND1-217ENST00000527599 CALR3Q96L12 384 aaKnown RBP15.7■□□□□ 0.1
CTNND1-217ENST00000527599 GAS2L1Q99501 681 aaPredicted RBP15.7■□□□□ 0.1
CTNND1-217ENST00000527599 ZNF777Q9ULD5 760 aaPredicted RBP15.7■□□□□ 0.1
CTNND1-217ENST00000527599 KIAA1024Q9UPX6 916 aa15.7■□□□□ 0.1
CTNND1-217ENST00000527599 CLDN10P78369 228 aa15.69■□□□□ 0.1
CTNND1-217ENST00000527599 INSM1Q01101 510 aaPredicted RBP15.69■□□□□ 0.1
CTNND1-217ENST00000527599 COL25A1Q9BXS0 654 aaPredicted RBP15.69■□□□□ 0.1
CTNND1-217ENST00000527599 RIPOR1Q6ZS17 1223 aa15.68■□□□□ 0.1
CTNND1-217ENST00000527599 TRIM22Q8IYM9 498 aa15.68■□□□□ 0.1
CTNND1-217ENST00000527599 SERBP1Q8NC51 408 aaKnown RBP eCLIP15.68■□□□□ 0.1
CTNND1-217ENST00000527599 ZNF837Q96EG3 531 aaPredicted RBP15.68■□□□□ 0.1
CTNND1-217ENST00000527599 USP3Q9Y6I4 520 aa15.68■□□□□ 0.1
CTNND1-217ENST00000527599 GNASQ5JWF2 1037 aa15.67■□□□□ 0.1
CTNND1-217ENST00000527599 ZNF295-AS1Q8N0V1 137 aa15.67■□□□□ 0.1
CTNND1-217ENST00000527599 RHBDD1Q8TEB9 315 aa15.67■□□□□ 0.1
CTNND1-217ENST00000527599 MAFBQ9Y5Q3 323 aaPredicted RBP15.67■□□□□ 0.1
CTNND1-217ENST00000527599 PALM3A6NDB9 673 aaPredicted RBP15.66■□□□□ 0.1
CTNND1-217ENST00000527599 THBS1P07996 1170 aa15.66■□□□□ 0.1
CTNND1-217ENST00000527599 ZNF358Q9NW07 568 aa15.66■□□□□ 0.1
CTNND1-217ENST00000527599 MKRN1Q9UHC7 482 aaKnown RBP15.66■□□□□ 0.1
CTNND1-217ENST00000527599 IQSEC3Q9UPP2 1182 aaPredicted RBP15.66■□□□□ 0.1
CTNND1-217ENST00000527599 MTFR1Q15390 333 aa15.65■□□□□ 0.1
CTNND1-217ENST00000527599 CNTNAP3BQ96NU0 1288 aa15.65■□□□□ 0.1
CTNND1-217ENST00000527599 CNTNAP3Q9BZ76 1288 aa15.65■□□□□ 0.1
CTNND1-217ENST00000527599 PPP1R12CQ9BZL4 782 aa15.65■□□□□ 0.1
CTNND1-217ENST00000527599 GTF3C3Q9Y5Q9 886 aa15.65■□□□□ 0.1
CTNND1-217ENST00000527599 F11P03951 625 aa15.64■□□□□ 0.09
CTNND1-217ENST00000527599 PSME1Q06323 249 aa15.64■□□□□ 0.09
CTNND1-217ENST00000527599 TRIM50Q86XT4 487 aa15.64■□□□□ 0.09
CTNND1-217ENST00000527599 A6NJY4 79 aa15.63■□□□□ 0.09
CTNND1-217ENST00000527599 GTF2E1P29083 439 aaPredicted RBP15.62■□□□□ 0.09
CTNND1-217ENST00000527599 GAS6Q14393 721 aa15.62■□□□□ 0.09
CTNND1-217ENST00000527599 GPAMQ9HCL2 828 aa15.62■□□□□ 0.09
CTNND1-217ENST00000527599 CDK2AP1O14519 115 aa15.61■□□□□ 0.09
CTNND1-217ENST00000527599 DKK1O94907 266 aa15.61■□□□□ 0.09
CTNND1-217ENST00000527599 OGFOD1Q8N543 542 aa15.61■□□□□ 0.09
CTNND1-217ENST00000527599 ZSCAN1Q8NBB4 408 aa15.61■□□□□ 0.09
CTNND1-217ENST00000527599 TPCN2Q8NHX9 752 aa15.61■□□□□ 0.09
CTNND1-217ENST00000527599 A0A1B0GTH6 734 aa15.6■□□□□ 0.09
CTNND1-217ENST00000527599 MSX1P28360 303 aa15.6■□□□□ 0.09
CTNND1-217ENST00000527599 PLA2G4AP47712 749 aa15.6■□□□□ 0.09
CTNND1-217ENST00000527599 EPHA4P54764 986 aa15.6■□□□□ 0.09
CTNND1-217ENST00000527599 GMCL1Q96IK5 515 aa15.6■□□□□ 0.09
CTNND1-217ENST00000527599 DNAAF2Q9NVR5 837 aaKnown RBP15.6■□□□□ 0.09
CTNND1-217ENST00000527599 GPR25O00155 361 aa15.59■□□□□ 0.09
CTNND1-217ENST00000527599 CCDC102BQ68D86 513 aa15.59■□□□□ 0.09
CTNND1-217ENST00000527599 GTPBP3Q969Y2 492 aaKnown RBP15.59■□□□□ 0.09
CTNND1-217ENST00000527599 ZMYND15Q9H091 742 aa15.58■□□□□ 0.08
CTNND1-217ENST00000527599 SCHIP1Q9P0W5 487 aaPredicted RBP15.58■□□□□ 0.08
CTNND1-217ENST00000527599 BACH1O14867 736 aa15.57■□□□□ 0.08
CTNND1-217ENST00000527599 ATP1A2P50993 1020 aa15.57■□□□□ 0.08
CTNND1-217ENST00000527599 FOXK2Q01167 660 aa15.57■□□□□ 0.08
CTNND1-217ENST00000527599 KANK4Q5T7N3 995 aaPredicted RBP15.57■□□□□ 0.08
CTNND1-217ENST00000527599 TNS4Q8IZW8 715 aa15.57■□□□□ 0.08
CTNND1-217ENST00000527599 LARGE2Q8N3Y3 721 aa15.57■□□□□ 0.08
CTNND1-217ENST00000527599 NIFKQ9BYG3 293 aaKnown RBP15.57■□□□□ 0.08
CTNND1-217ENST00000527599 H7C1W4 665 aa15.56■□□□□ 0.08
CTNND1-217ENST00000527599 ZNF594Q96JF6 807 aaPredicted RBP15.56■□□□□ 0.08
CTNND1-217ENST00000527599 NUCKS1Q9H1E3 243 aaKnown RBP15.56■□□□□ 0.08
CTNND1-217ENST00000527599 RUBCNLQ9H714 662 aa15.56■□□□□ 0.08
CTNND1-217ENST00000527599 STK17AQ9UEE5 414 aa15.56■□□□□ 0.08
CTNND1-217ENST00000527599 CFAP70Q5T0N1 1121 aa15.55■□□□□ 0.08
CTNND1-217ENST00000527599 SIX5Q8N196 739 aa15.55■□□□□ 0.08
CTNND1-217ENST00000527599 LMOD1P29536 600 aaPredicted RBP15.54■□□□□ 0.08
CTNND1-217ENST00000527599 UBAP2LQ14157 1087 aaKnown RBP15.54■□□□□ 0.08
CTNND1-217ENST00000527599 ATP4AP20648 1035 aa15.53■□□□□ 0.08
CTNND1-217ENST00000527599 TBCELQ5QJ74 424 aa15.53■□□□□ 0.08
CTNND1-217ENST00000527599 ZDHHC1Q8WTX9 485 aa15.53■□□□□ 0.08
CTNND1-217ENST00000527599 PARP3Q9Y6F1 533 aa15.53■□□□□ 0.08
CTNND1-217ENST00000527599 SFI1A8K8P3 1242 aa15.52■□□□□ 0.08
CTNND1-217ENST00000527599 RASA1P20936 1047 aa15.52■□□□□ 0.08
CTNND1-217ENST00000527599 CRTC2Q53ET0 693 aaPredicted RBP15.51■□□□□ 0.07
CTNND1-217ENST00000527599 CABP1Q9NZU7 370 aa15.51■□□□□ 0.07
CTNND1-217ENST00000527599 SLURP2P0DP57 97 aa15.5■□□□□ 0.07
CTNND1-217ENST00000527599 SLC9A9Q8IVB4 645 aa15.5■□□□□ 0.07
CTNND1-217ENST00000527599 AIDAQ96BJ3 306 aa15.5■□□□□ 0.07
CTNND1-217ENST00000527599 WHAMMQ8TF30 809 aa15.49■□□□□ 0.07
CTNND1-217ENST00000527599 TSEN2Q8NCE0 465 aaKnown RBP15.48■□□□□ 0.07
CTNND1-217ENST00000527599 CRISPLD1Q9H336 500 aa15.48■□□□□ 0.07
CTNND1-217ENST00000527599 PTK7Q13308 1070 aa15.47■□□□□ 0.07
CTNND1-217ENST00000527599 FOXR1Q6PIV2 292 aa15.47■□□□□ 0.07
CTNND1-217ENST00000527599 M0R2N6 131 aa15.46■□□□□ 0.07
CTNND1-217ENST00000527599 CSB-PGBD3P0DP91 1061 aa15.46■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms