RNA–Protein interactions for RNA: ENST00000527254.5

MS4A6A-207, Transcript of membrane spanning 4-domains A6A, humanhuman

TSL 5

Gene MS4A6A, Length 790 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MS4A6A-207ENST00000527254 RNFT1Q5M7Z0 435 aa9.55□□□□□ -0.88
MS4A6A-207ENST00000527254 TRMT44Q8IYL2 757 aaKnown RBP9.54□□□□□ -0.88
MS4A6A-207ENST00000527254 CCDC116Q8IYX3 515 aa9.54□□□□□ -0.88
MS4A6A-207ENST00000527254 TSEN34Q9BSV6 310 aaKnown RBP9.54□□□□□ -0.88
MS4A6A-207ENST00000527254 MAP4K5Q9Y4K4 846 aa9.54□□□□□ -0.88
MS4A6A-207ENST00000527254 UHRF1BP1Q6BDS2 1440 aa9.54□□□□□ -0.88
MS4A6A-207ENST00000527254 NEUROD2Q15784 382 aa9.53□□□□□ -0.88
MS4A6A-207ENST00000527254 WHAMMQ8TF30 809 aa9.53□□□□□ -0.88
MS4A6A-207ENST00000527254 COL25A1Q9BXS0 654 aaPredicted RBP9.53□□□□□ -0.88
MS4A6A-207ENST00000527254 ADAMTS8Q9UP79 889 aa9.53□□□□□ -0.88
MS4A6A-207ENST00000527254 MLH3Q9UHC1 1453 aa9.53□□□□□ -0.88
MS4A6A-207ENST00000527254 ZNF800Q2TB10 664 aaPredicted RBP eCLIP9.52□□□□□ -0.89
MS4A6A-207ENST00000527254 ERFEQ4G0M1 354 aa9.52□□□□□ -0.89
MS4A6A-207ENST00000527254 PPP1R26Q5T8A7 1209 aaPredicted RBP9.52□□□□□ -0.89
MS4A6A-207ENST00000527254 AK7Q96M32 723 aa9.52□□□□□ -0.89
MS4A6A-207ENST00000527254 EMILIN1Q9Y6C2 1016 aa9.52□□□□□ -0.89
MS4A6A-207ENST00000527254 ARHGAP35Q9NRY4 1499 aa9.52□□□□□ -0.89
MS4A6A-207ENST00000527254 PTPRTO14522 1441 aa9.51□□□□□ -0.89
MS4A6A-207ENST00000527254 TRAPPC8Q9Y2L5 1435 aa9.51□□□□□ -0.89
MS4A6A-207ENST00000527254 RASSF7Q02833 373 aa9.51□□□□□ -0.89
MS4A6A-207ENST00000527254 CCDC155Q8N6L0 562 aa9.51□□□□□ -0.89
MS4A6A-207ENST00000527254 ARMC2Q8NEN0 867 aa9.51□□□□□ -0.89
MS4A6A-207ENST00000527254 AGBL1Q96MI9 1066 aa9.51□□□□□ -0.89
MS4A6A-207ENST00000527254 ARHGAP5Q13017 1502 aa9.51□□□□□ -0.89
MS4A6A-207ENST00000527254 CTDSPL2Q05D32 466 aa9.5□□□□□ -0.89
MS4A6A-207ENST00000527254 NBPF14Q5TI25 921 aa9.5□□□□□ -0.89
MS4A6A-207ENST00000527254 KIF14Q15058 1648 aa9.49□□□□□ -0.89
MS4A6A-207ENST00000527254 CNTLNQ9NXG0 1405 aa9.49□□□□□ -0.89
MS4A6A-207ENST00000527254 SIGLEC1Q9BZZ2 1709 aa9.49□□□□□ -0.89
MS4A6A-207ENST00000527254 GDF11O95390 407 aa9.49□□□□□ -0.89
MS4A6A-207ENST00000527254 PDE4DQ08499 809 aa9.49□□□□□ -0.89
MS4A6A-207ENST00000527254 FBXO31Q5XUX0 539 aaPredicted RBP9.49□□□□□ -0.89
MS4A6A-207ENST00000527254 ZNF385CQ66K41 422 aaPredicted RBP9.49□□□□□ -0.89
MS4A6A-207ENST00000527254 Q6ZVU0 165 aa9.49□□□□□ -0.89
MS4A6A-207ENST00000527254 TMEM151AQ8N4L1 468 aa9.49□□□□□ -0.89
MS4A6A-207ENST00000527254 POLR3EQ9NVU0 708 aa9.49□□□□□ -0.89
MS4A6A-207ENST00000527254 AGLP35573 1532 aa9.49□□□□□ -0.89
MS4A6A-207ENST00000527254 FER1L4A9Z1Z3 1794 aa9.49□□□□□ -0.89
MS4A6A-207ENST00000527254 KDM5CP41229 1560 aa9.49□□□□□ -0.89
MS4A6A-207ENST00000527254 REREQ9P2R6 1566 aa9.49□□□□□ -0.89
MS4A6A-207ENST00000527254 SPINT1O43278 529 aa9.48□□□□□ -0.89
MS4A6A-207ENST00000527254 CTSOP43234 321 aaPredicted RBP9.48□□□□□ -0.89
MS4A6A-207ENST00000527254 TRIM26Q12899 539 aaPredicted RBP9.48□□□□□ -0.89
MS4A6A-207ENST00000527254 TUSC1Q2TAM9 212 aa9.48□□□□□ -0.89
MS4A6A-207ENST00000527254 PREX1Q8TCU6 1659 aa9.48□□□□□ -0.89
MS4A6A-207ENST00000527254 DISP3Q9P2K9 1392 aa9.48□□□□□ -0.89
MS4A6A-207ENST00000527254 MYO5CQ9NQX4 1742 aa9.48□□□□□ -0.89
MS4A6A-207ENST00000527254 SLC35F4A4IF30 521 aa9.47□□□□□ -0.89
MS4A6A-207ENST00000527254 SOCS7O14512 581 aa9.47□□□□□ -0.89
MS4A6A-207ENST00000527254 NPM2Q86SE8 214 aaKnown RBP9.47□□□□□ -0.89
MS4A6A-207ENST00000527254 VWA5B2Q8N398 1253 aa9.47□□□□□ -0.89
MS4A6A-207ENST00000527254 HELBQ8NG08 1087 aaPredicted RBP9.47□□□□□ -0.89
MS4A6A-207ENST00000527254 LRRN4Q8WUT4 740 aa9.47□□□□□ -0.89
MS4A6A-207ENST00000527254 NANOS1Q8WY41 292 aaKnown RBP9.47□□□□□ -0.89
MS4A6A-207ENST00000527254 CASKIN1Q8WXD9 1431 aa9.47□□□□□ -0.89
MS4A6A-207ENST00000527254 CCDC18Q5T9S5 1454 aa9.47□□□□□ -0.89
MS4A6A-207ENST00000527254 INSM2Q96T92 566 aaPredicted RBP9.46□□□□□ -0.9
MS4A6A-207ENST00000527254 OCSTAMPQ9BR26 566 aa9.46□□□□□ -0.9
MS4A6A-207ENST00000527254 NPATQ14207 1427 aa9.46□□□□□ -0.9
MS4A6A-207ENST00000527254 SETD1BQ9UPS6 1966 aaKnown RBP9.45□□□□□ -0.9
MS4A6A-207ENST00000527254 KCTD15Q96SI1 283 aaPredicted RBP9.45□□□□□ -0.9
MS4A6A-207ENST00000527254 ZNF777Q9ULD5 760 aaPredicted RBP9.45□□□□□ -0.9
MS4A6A-207ENST00000527254 SPAG9O60271 1321 aaKnown RBP9.45□□□□□ -0.9
MS4A6A-207ENST00000527254 ZMYM3Q14202 1370 aa9.45□□□□□ -0.9
MS4A6A-207ENST00000527254 IQSEC2Q5JU85 1478 aa9.45□□□□□ -0.9
MS4A6A-207ENST00000527254 DIP2CQ9Y2E4 1556 aa9.45□□□□□ -0.9
MS4A6A-207ENST00000527254 CLK2P49760 499 aaKnown RBP9.44□□□□□ -0.9
MS4A6A-207ENST00000527254 HNRNPMP52272 730 aaKnown RBP eCLIP9.44□□□□□ -0.9
MS4A6A-207ENST00000527254 RELBQ01201 579 aa9.44□□□□□ -0.9
MS4A6A-207ENST00000527254 ZMYND15Q9H091 742 aa9.44□□□□□ -0.9
MS4A6A-207ENST00000527254 NCOA1Q15788 1441 aa9.43□□□□□ -0.9
MS4A6A-207ENST00000527254 KIAA1107Q9UPP5 1409 aa9.43□□□□□ -0.9
MS4A6A-207ENST00000527254 CDC14CA4D256 554 aa9.43□□□□□ -0.9
MS4A6A-207ENST00000527254 ITGA6P23229 1130 aa9.43□□□□□ -0.9
MS4A6A-207ENST00000527254 ILDR2Q71H61 639 aa9.43□□□□□ -0.9
MS4A6A-207ENST00000527254 SVOPQ8N4V2 548 aa9.43□□□□□ -0.9
MS4A6A-207ENST00000527254 ARHGAP9Q9BRR9 750 aa9.43□□□□□ -0.9
MS4A6A-207ENST00000527254 ZNF395Q9H8N7 513 aaPredicted RBP9.43□□□□□ -0.9
MS4A6A-207ENST00000527254 SLC24A3Q9HC58 644 aa9.43□□□□□ -0.9
MS4A6A-207ENST00000527254 PGPEP1Q9NXJ5 209 aa9.43□□□□□ -0.9
MS4A6A-207ENST00000527254 CFDP1Q9UEE9 299 aaPredicted RBP9.43□□□□□ -0.9
MS4A6A-207ENST00000527254 STRCQ7RTU9 1775 aa9.42□□□□□ -0.9
MS4A6A-207ENST00000527254 ABCC1P33527 1531 aa9.42□□□□□ -0.9
MS4A6A-207ENST00000527254 SENP3-EIF4A1A0A087X0R7 540 aa9.42□□□□□ -0.9
MS4A6A-207ENST00000527254 ARHGEF15O94989 841 aa9.42□□□□□ -0.9
MS4A6A-207ENST00000527254 INTS6LQ5JSJ4 861 aaKnown RBP9.42□□□□□ -0.9
MS4A6A-207ENST00000527254 RSPH6AQ9H0K4 717 aa9.42□□□□□ -0.9
MS4A6A-207ENST00000527254 TMPRSS4Q9NRS4 437 aa9.42□□□□□ -0.9
MS4A6A-207ENST00000527254 PLEKHH2Q8IVE3 1493 aa9.41□□□□□ -0.9
MS4A6A-207ENST00000527254 SLURP2P0DP57 97 aa9.41□□□□□ -0.9
MS4A6A-207ENST00000527254 IRS1P35568 1242 aa9.41□□□□□ -0.9
MS4A6A-207ENST00000527254 NR6A1Q15406 480 aa9.41□□□□□ -0.9
MS4A6A-207ENST00000527254 PDXDC2PQ6P474 469 aa9.41□□□□□ -0.9
MS4A6A-207ENST00000527254 GGT6Q6P531 493 aa9.4□□□□□ -0.9
MS4A6A-207ENST00000527254 GPKOWQ92917 476 aaPredicted RBP eCLIP9.4□□□□□ -0.9
MS4A6A-207ENST00000527254 FKBPLQ9UIM3 349 aa9.4□□□□□ -0.9
MS4A6A-207ENST00000527254 ABCA6Q8N139 1617 aa9.4□□□□□ -0.9
MS4A6A-207ENST00000527254 GPATCH8Q9UKJ3 1502 aaKnown RBP9.4□□□□□ -0.91
MS4A6A-207ENST00000527254 FYCO1Q9BQS8 1478 aa9.4□□□□□ -0.91
MS4A6A-207ENST00000527254 CDC42BPBQ9Y5S2 1711 aa9.39□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms