RNA–Protein interactions for RNA: ENST00000527029.1

ALKBH3-203, Transcript of alkB homolog 3, alpha-ketoglutaratedependent dioxygenase, humanhuman

TSL 2

Gene ALKBH3, Length 569 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ALKBH3-203ENST00000527029 GNPATO15228 680 aa21.2■□□□□ 0.98
ALKBH3-203ENST00000527029 HSP90AB2PQ58FF8 381 aa21.2■□□□□ 0.98
ALKBH3-203ENST00000527029 ITPK1Q13572 414 aa21.19■□□□□ 0.98
ALKBH3-203ENST00000527029 TNS4Q8IZW8 715 aa21.19■□□□□ 0.98
ALKBH3-203ENST00000527029 PRELPP51888 382 aa21.18■□□□□ 0.98
ALKBH3-203ENST00000527029 C16orf71Q8IYS4 520 aaPredicted RBP21.18■□□□□ 0.98
ALKBH3-203ENST00000527029 INSRP06213 1382 aa21.18■□□□□ 0.98
ALKBH3-203ENST00000527029 FSTL1Q12841 308 aa21.17■□□□□ 0.98
ALKBH3-203ENST00000527029 NKX1-1Q15270 411 aaPredicted RBP21.17■□□□□ 0.98
ALKBH3-203ENST00000527029 C9orf131Q5VYM1 1079 aa21.17■□□□□ 0.98
ALKBH3-203ENST00000527029 GGNBP2Q9H3C7 697 aa21.17■□□□□ 0.98
ALKBH3-203ENST00000527029 C10orf71Q711Q0 1435 aa21.16■□□□□ 0.98
ALKBH3-203ENST00000527029 FYB1O15117 783 aa21.16■□□□□ 0.98
ALKBH3-203ENST00000527029 FCHSD2O94868 740 aa21.16■□□□□ 0.98
ALKBH3-203ENST00000527029 DPEP1P16444 411 aa21.16■□□□□ 0.98
ALKBH3-203ENST00000527029 ASAP1Q9ULH1 1129 aa21.16■□□□□ 0.98
ALKBH3-203ENST00000527029 PKD1L3Q7Z443 1732 aa21.15■□□□□ 0.98
ALKBH3-203ENST00000527029 ATP6V1AP38606 617 aa21.15■□□□□ 0.98
ALKBH3-203ENST00000527029 BRCA1P38398 1863 aaKnown RBP21.15■□□□□ 0.98
ALKBH3-203ENST00000527029 PLEKHG2Q9H7P9 1386 aa21.13■□□□□ 0.97
ALKBH3-203ENST00000527029 TMF1P82094 1093 aa21.13■□□□□ 0.97
ALKBH3-203ENST00000527029 TESK2Q96S53 571 aa21.13■□□□□ 0.97
ALKBH3-203ENST00000527029 FLT4P35916 1363 aa21.12■□□□□ 0.97
ALKBH3-203ENST00000527029 NLGN1Q8N2Q7 840 aa21.12■□□□□ 0.97
ALKBH3-203ENST00000527029 TMOD3Q9NYL9 352 aa21.12■□□□□ 0.97
ALKBH3-203ENST00000527029 KCPQ6ZWJ8 1503 aa21.12■□□□□ 0.97
ALKBH3-203ENST00000527029 KCNA3P22001 575 aa21.11■□□□□ 0.97
ALKBH3-203ENST00000527029 TRAPPC3LQ5T215 181 aa21.11■□□□□ 0.97
ALKBH3-203ENST00000527029 CCDC87Q9NVE4 849 aa21.11■□□□□ 0.97
ALKBH3-203ENST00000527029 ARFGEF1Q9Y6D6 1849 aa21.11■□□□□ 0.97
ALKBH3-203ENST00000527029 KDM2BQ8NHM5 1336 aa21.1■□□□□ 0.97
ALKBH3-203ENST00000527029 RRAGCQ9HB90 399 aa21.1■□□□□ 0.97
ALKBH3-203ENST00000527029 SPG7Q9UQ90 795 aa21.1■□□□□ 0.97
ALKBH3-203ENST00000527029 RTCBQ9Y3I0 505 aaKnown RBP21.1■□□□□ 0.97
ALKBH3-203ENST00000527029 C4AP0C0L4 1744 aa21.09■□□□□ 0.97
ALKBH3-203ENST00000527029 ATG3Q9NT62 314 aa21.09■□□□□ 0.97
ALKBH3-203ENST00000527029 KIF24Q5T7B8 1368 aa21.09■□□□□ 0.97
ALKBH3-203ENST00000527029 NCAPD2Q15021 1401 aa21.08■□□□□ 0.97
ALKBH3-203ENST00000527029 ARHGEF1Q92888 912 aaKnown RBP21.08■□□□□ 0.97
ALKBH3-203ENST00000527029 ST20-MTHFSA0A0A6YYL1 179 aa21.07■□□□□ 0.96
ALKBH3-203ENST00000527029 GYS1P13807 737 aa21.07■□□□□ 0.96
ALKBH3-203ENST00000527029 RNF181Q9P0P0 153 aa21.07■□□□□ 0.96
ALKBH3-203ENST00000527029 DCAF5Q96JK2 942 aa21.06■□□□□ 0.96
ALKBH3-203ENST00000527029 PIM2Q9P1W9 311 aa21.06■□□□□ 0.96
ALKBH3-203ENST00000527029 PARP3Q9Y6F1 533 aa21.06■□□□□ 0.96
ALKBH3-203ENST00000527029 SMC1BQ8NDV3 1235 aa21.05■□□□□ 0.96
ALKBH3-203ENST00000527029 SLC4A9Q96Q91 983 aa21.05■□□□□ 0.96
ALKBH3-203ENST00000527029 EMILIN1Q9Y6C2 1016 aa21.05■□□□□ 0.96
ALKBH3-203ENST00000527029 KDRP35968 1356 aa21.05■□□□□ 0.96
ALKBH3-203ENST00000527029 ADRA2BP18089 450 aa21.04■□□□□ 0.96
ALKBH3-203ENST00000527029 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP21.04■□□□□ 0.96
ALKBH3-203ENST00000527029 TNRC6CQ9HCJ0 1690 aaKnown RBP21.04■□□□□ 0.96
ALKBH3-203ENST00000527029 SBF1O95248 1867 aa21.04■□□□□ 0.96
ALKBH3-203ENST00000527029 HSPA1AP0DMV8 641 aaKnown RBP21.03■□□□□ 0.96
ALKBH3-203ENST00000527029 HSPA1BP0DMV9 641 aaKnown RBP21.03■□□□□ 0.96
ALKBH3-203ENST00000527029 HSPA5P11021 654 aaKnown RBP21.03■□□□□ 0.96
ALKBH3-203ENST00000527029 PHKG2P15735 406 aa21.03■□□□□ 0.96
ALKBH3-203ENST00000527029 RFC4P35249 363 aa21.03■□□□□ 0.96
ALKBH3-203ENST00000527029 DALRD3Q5D0E6 543 aaKnown RBP21.03■□□□□ 0.96
ALKBH3-203ENST00000527029 RC3H1Q5TC82 1133 aaKnown RBP21.03■□□□□ 0.96
ALKBH3-203ENST00000527029 IFNL2Q8IZJ0 200 aa21.03■□□□□ 0.96
ALKBH3-203ENST00000527029 KIF20BQ96Q89 1820 aa21.02■□□□□ 0.96
ALKBH3-203ENST00000527029 MYH14Q7Z406 1995 aaKnown RBP21.01■□□□□ 0.95
ALKBH3-203ENST00000527029 SLC24A1O60721 1099 aa21■□□□□ 0.95
ALKBH3-203ENST00000527029 RPS6KA4O75676 772 aa21■□□□□ 0.95
ALKBH3-203ENST00000527029 EYA1Q99502 592 aa21■□□□□ 0.95
ALKBH3-203ENST00000527029 RBM42Q9BTD8 480 aaKnown RBP21■□□□□ 0.95
ALKBH3-203ENST00000527029 CNTNAP4Q9C0A0 1308 aa21■□□□□ 0.95
ALKBH3-203ENST00000527029 ZNF831Q5JPB2 1677 aa20.99■□□□□ 0.95
ALKBH3-203ENST00000527029 COL5A3P25940 1745 aaPredicted RBP20.99■□□□□ 0.95
ALKBH3-203ENST00000527029 PPM1GO15355 546 aaPredicted RBP20.99■□□□□ 0.95
ALKBH3-203ENST00000527029 CHRNA5P30532 468 aa20.97■□□□□ 0.95
ALKBH3-203ENST00000527029 DDR1Q08345 913 aa20.96■□□□□ 0.95
ALKBH3-203ENST00000527029 FKBP8Q14318 412 aa20.95■□□□□ 0.94
ALKBH3-203ENST00000527029 SRP68Q9UHB9 627 aaKnown RBP20.95■□□□□ 0.94
ALKBH3-203ENST00000527029 WASHC2AQ641Q2 1341 aa20.95■□□□□ 0.94
ALKBH3-203ENST00000527029 ERVV-2B6SEH9 535 aa20.94■□□□□ 0.94
ALKBH3-203ENST00000527029 ANKRD26Q9UPS8 1709 aa20.94■□□□□ 0.94
ALKBH3-203ENST00000527029 VEGFAP15692 232 aaPredicted RBP20.93■□□□□ 0.94
ALKBH3-203ENST00000527029 RASSF7Q02833 373 aa20.93■□□□□ 0.94
ALKBH3-203ENST00000527029 DDX10Q13206 875 aaKnown RBP20.93■□□□□ 0.94
ALKBH3-203ENST00000527029 CARD14Q9BXL6 1004 aa20.93■□□□□ 0.94
ALKBH3-203ENST00000527029 ZC3H4Q9UPT8 1303 aaKnown RBP20.93■□□□□ 0.94
ALKBH3-203ENST00000527029 ANP32CO43423 234 aa20.92■□□□□ 0.94
ALKBH3-203ENST00000527029 MIER1Q8N108 512 aa20.92■□□□□ 0.94
ALKBH3-203ENST00000527029 KDM6AO15550 1401 aaPredicted RBP20.92■□□□□ 0.94
ALKBH3-203ENST00000527029 GLTPD2A6NH11 291 aa20.91■□□□□ 0.94
ALKBH3-203ENST00000527029 USP42Q9H9J4 1324 aaKnown RBP20.91■□□□□ 0.94
ALKBH3-203ENST00000527029 CENPBP07199 599 aaPredicted RBP20.9■□□□□ 0.94
ALKBH3-203ENST00000527029 CRKLP46109 303 aaKnown RBP20.9■□□□□ 0.94
ALKBH3-203ENST00000527029 POLRMTO00411 1230 aaKnown RBP20.89■□□□□ 0.93
ALKBH3-203ENST00000527029 LMNB1P20700 586 aa20.89■□□□□ 0.93
ALKBH3-203ENST00000527029 PTCD1O75127 700 aaKnown RBP20.88■□□□□ 0.93
ALKBH3-203ENST00000527029 TM4SF1P30408 202 aa20.88■□□□□ 0.93
ALKBH3-203ENST00000527029 POLKQ9UBT6 870 aa20.87■□□□□ 0.93
ALKBH3-203ENST00000527029 CCDC88AQ3V6T2 1871 aa20.87■□□□□ 0.93
ALKBH3-203ENST00000527029 HSP90AB1P08238 724 aaKnown RBP20.86■□□□□ 0.93
ALKBH3-203ENST00000527029 CABP4P57796 275 aa20.86■□□□□ 0.93
ALKBH3-203ENST00000527029 EIF4A2Q14240 407 aaKnown RBP20.86■□□□□ 0.93
ALKBH3-203ENST00000527029 POTECB2RU33 542 aa20.85■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms