RNA–Protein interactions for RNA: ENST00000526631.1

CCDC90B-207, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 2

Gene CCDC90B, Length 628 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-207ENST00000526631 ST20-MTHFSA0A0A6YYL1 179 aa11.36□□□□□ -0.59
CCDC90B-207ENST00000526631 LARP1Q6PKG0 1096 aaKnown RBP11.36□□□□□ -0.59
CCDC90B-207ENST00000526631 ARHGEF25Q86VW2 580 aa11.36□□□□□ -0.59
CCDC90B-207ENST00000526631 USP31Q70CQ4 1352 aa11.36□□□□□ -0.59
CCDC90B-207ENST00000526631 WDR17Q8IZU2 1322 aa11.35□□□□□ -0.59
CCDC90B-207ENST00000526631 DDB1Q16531 1140 aa11.35□□□□□ -0.59
CCDC90B-207ENST00000526631 SUGP2Q8IX01 1082 aaKnown RBP eCLIP11.35□□□□□ -0.59
CCDC90B-207ENST00000526631 TMC2Q8TDI7 906 aa11.35□□□□□ -0.59
CCDC90B-207ENST00000526631 PCGF6Q9BYE7 350 aa11.35□□□□□ -0.59
CCDC90B-207ENST00000526631 CCDC7Q96M83 1385 aa11.35□□□□□ -0.59
CCDC90B-207ENST00000526631 COL5A2P05997 1499 aaPredicted RBP11.35□□□□□ -0.59
CCDC90B-207ENST00000526631 THSD7AQ9UPZ6 1657 aa11.35□□□□□ -0.59
CCDC90B-207ENST00000526631 CAMTA1Q9Y6Y1 1673 aa11.35□□□□□ -0.59
CCDC90B-207ENST00000526631 MON2Q7Z3U7 1717 aa11.35□□□□□ -0.59
CCDC90B-207ENST00000526631 LMO7Q8WWI1 1683 aa11.34□□□□□ -0.59
CCDC90B-207ENST00000526631 HMGB2P26583 209 aaKnown RBP11.34□□□□□ -0.59
CCDC90B-207ENST00000526631 NBPF14Q5TI25 921 aa11.34□□□□□ -0.59
CCDC90B-207ENST00000526631 COG3Q96JB2 828 aa11.34□□□□□ -0.59
CCDC90B-207ENST00000526631 CARD10Q9BWT7 1032 aa11.34□□□□□ -0.59
CCDC90B-207ENST00000526631 PIK3C2AO00443 1686 aa11.33□□□□□ -0.6
CCDC90B-207ENST00000526631 EXOC5O00471 708 aa11.33□□□□□ -0.6
CCDC90B-207ENST00000526631 SLC4A5Q9BY07 1137 aa11.33□□□□□ -0.6
CCDC90B-207ENST00000526631 SLC12A5Q9H2X9 1139 aa11.33□□□□□ -0.6
CCDC90B-207ENST00000526631 USP47Q96K76 1375 aa11.32□□□□□ -0.6
CCDC90B-207ENST00000526631 ITGBL1O95965 494 aaPredicted RBP11.32□□□□□ -0.6
CCDC90B-207ENST00000526631 APBA3O96018 575 aa11.32□□□□□ -0.6
CCDC90B-207ENST00000526631 CCER1Q8TC90 406 aaPredicted RBP11.32□□□□□ -0.6
CCDC90B-207ENST00000526631 WNT2BQ93097 391 aa11.32□□□□□ -0.6
CCDC90B-207ENST00000526631 DISP2A7MBM2 1401 aa11.32□□□□□ -0.6
CCDC90B-207ENST00000526631 ANKRD36BQ8N2N9 1353 aa11.31□□□□□ -0.6
CCDC90B-207ENST00000526631 TRAF7Q6Q0C0 670 aa11.31□□□□□ -0.6
CCDC90B-207ENST00000526631 TESK2Q96S53 571 aa11.31□□□□□ -0.6
CCDC90B-207ENST00000526631 BCL11BQ9C0K0 894 aaPredicted RBP11.31□□□□□ -0.6
CCDC90B-207ENST00000526631 OVOS2A0A0G2JMS6 1433 aa11.31□□□□□ -0.6
CCDC90B-207ENST00000526631 OVOS2A0A0J9YW53 1432 aa11.31□□□□□ -0.6
CCDC90B-207ENST00000526631 OVOS2Q6IE36 1432 aa11.31□□□□□ -0.6
CCDC90B-207ENST00000526631 PARP4Q9UKK3 1724 aaKnown RBP11.31□□□□□ -0.6
CCDC90B-207ENST00000526631 USP54Q70EL1 1684 aa11.3□□□□□ -0.6
CCDC90B-207ENST00000526631 TRIM37O94972 964 aa11.3□□□□□ -0.6
CCDC90B-207ENST00000526631 DEFB132Q7Z7B7 95 aa11.3□□□□□ -0.6
CCDC90B-207ENST00000526631 NLRP2Q9NX02 1062 aa11.29□□□□□ -0.6
CCDC90B-207ENST00000526631 A0A1W2PP64 1363 aa11.28□□□□□ -0.6
CCDC90B-207ENST00000526631 COL18A1P39060 1754 aa11.28□□□□□ -0.6
CCDC90B-207ENST00000526631 AMPHP49418 695 aa11.28□□□□□ -0.6
CCDC90B-207ENST00000526631 EN1Q05925 392 aaPredicted RBP11.28□□□□□ -0.6
CCDC90B-207ENST00000526631 NME9Q86XW9 330 aa11.28□□□□□ -0.6
CCDC90B-207ENST00000526631 BCL9O00512 1426 aa11.27□□□□□ -0.6
CCDC90B-207ENST00000526631 PLSCR1O15162 318 aa11.27□□□□□ -0.61
CCDC90B-207ENST00000526631 IL2RBP14784 551 aa11.27□□□□□ -0.61
CCDC90B-207ENST00000526631 EIF4G2P78344 907 aaKnown RBP eCLIP11.27□□□□□ -0.61
CCDC90B-207ENST00000526631 IP6K1Q92551 441 aa11.27□□□□□ -0.61
CCDC90B-207ENST00000526631 KAT6BQ8WYB5 2073 aa11.27□□□□□ -0.61
CCDC90B-207ENST00000526631 KIF24Q5T7B8 1368 aa11.27□□□□□ -0.61
CCDC90B-207ENST00000526631 FAM208AQ9UK61 1670 aaKnown RBP11.27□□□□□ -0.61
CCDC90B-207ENST00000526631 SMG6Q86US8 1419 aaKnown RBP11.26□□□□□ -0.61
CCDC90B-207ENST00000526631 LTN1O94822 1766 aa11.26□□□□□ -0.61
CCDC90B-207ENST00000526631 NFAT5O94916 1531 aa11.26□□□□□ -0.61
CCDC90B-207ENST00000526631 EP400Q96L91 3159 aa11.26□□□□□ -0.61
CCDC90B-207ENST00000526631 FAM182BQ5T319 152 aa11.26□□□□□ -0.61
CCDC90B-207ENST00000526631 ANKRD24Q8TF21 1146 aa11.26□□□□□ -0.61
CCDC90B-207ENST00000526631 CAMKK2Q96RR4 588 aa11.26□□□□□ -0.61
CCDC90B-207ENST00000526631 RGPD5Q99666 1765 aa11.26□□□□□ -0.61
CCDC90B-207ENST00000526631 CD163L1Q9NR16 1453 aa11.25□□□□□ -0.61
CCDC90B-207ENST00000526631 CGNL1Q0VF96 1302 aa11.25□□□□□ -0.61
CCDC90B-207ENST00000526631 RTL1A6NKG5 1358 aa11.25□□□□□ -0.61
CCDC90B-207ENST00000526631 ZBED2Q9BTP6 218 aa11.24□□□□□ -0.61
CCDC90B-207ENST00000526631 TNS1Q9HBL0 1735 aaKnown RBP11.23□□□□□ -0.61
CCDC90B-207ENST00000526631 EZH2Q15910 746 aaKnown RBP11.23□□□□□ -0.61
CCDC90B-207ENST00000526631 WNK3Q9BYP7 1800 aa11.23□□□□□ -0.61
CCDC90B-207ENST00000526631 RGPD3A6NKT7 1758 aaPredicted RBP11.22□□□□□ -0.61
CCDC90B-207ENST00000526631 FYB1O15117 783 aa11.22□□□□□ -0.61
CCDC90B-207ENST00000526631 LAPTM4AQ15012 233 aa11.22□□□□□ -0.61
CCDC90B-207ENST00000526631 RGPD4Q7Z3J3 1758 aa11.22□□□□□ -0.61
CCDC90B-207ENST00000526631 MRPL50Q8N5N7 158 aaKnown RBP11.22□□□□□ -0.61
CCDC90B-207ENST00000526631 BCL2L12Q9HB09 334 aa11.22□□□□□ -0.61
CCDC90B-207ENST00000526631 TNS2Q63HR2 1409 aa11.21□□□□□ -0.61
CCDC90B-207ENST00000526631 GOLGA8CPA6NN73 597 aa11.21□□□□□ -0.61
CCDC90B-207ENST00000526631 HOXC9P31274 260 aa11.21□□□□□ -0.61
CCDC90B-207ENST00000526631 RAPGEF4Q8WZA2 1011 aa11.21□□□□□ -0.61
CCDC90B-207ENST00000526631 SBF2Q86WG5 1849 aa11.21□□□□□ -0.62
CCDC90B-207ENST00000526631 LRRC37A3O60309 1634 aa11.2□□□□□ -0.62
CCDC90B-207ENST00000526631 R3HDM1Q15032 1099 aaKnown RBP11.2□□□□□ -0.62
CCDC90B-207ENST00000526631 MARCH10Q8NA82 808 aaPredicted RBP11.2□□□□□ -0.62
CCDC90B-207ENST00000526631 STK24Q9Y6E0 443 aa11.2□□□□□ -0.62
CCDC90B-207ENST00000526631 FLT4P35916 1363 aa11.19□□□□□ -0.62
CCDC90B-207ENST00000526631 KIF20BQ96Q89 1820 aa11.19□□□□□ -0.62
CCDC90B-207ENST00000526631 MAP3K19Q56UN5 1328 aa11.19□□□□□ -0.62
CCDC90B-207ENST00000526631 GFRA3O60609 400 aa11.19□□□□□ -0.62
CCDC90B-207ENST00000526631 PPP1R37O75864 691 aa11.19□□□□□ -0.62
CCDC90B-207ENST00000526631 PLPP6Q8IY26 295 aa11.19□□□□□ -0.62
CCDC90B-207ENST00000526631 LTV1Q96GA3 475 aaPredicted RBP11.19□□□□□ -0.62
CCDC90B-207ENST00000526631 GGNBP2Q9H3C7 697 aa11.19□□□□□ -0.62
CCDC90B-207ENST00000526631 LRP5O75197 1615 aa11.19□□□□□ -0.62
CCDC90B-207ENST00000526631 TATP17735 454 aaPredicted RBP11.18□□□□□ -0.62
CCDC90B-207ENST00000526631 FOXK1P85037 733 aa11.18□□□□□ -0.62
CCDC90B-207ENST00000526631 ZCRB1Q8TBF4 217 aaKnown RBP11.18□□□□□ -0.62
CCDC90B-207ENST00000526631 POLR3GLQ9BT43 218 aa11.18□□□□□ -0.62
CCDC90B-207ENST00000526631 SPON1Q9HCB6 807 aa11.18□□□□□ -0.62
CCDC90B-207ENST00000526631 STK32BQ9NY57 414 aa11.18□□□□□ -0.62
CCDC90B-207ENST00000526631 PEAK1Q9H792 1746 aa11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms