RNA–Protein interactions for RNA: ENST00000526299.5

ECHDC1-219, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 534 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-219ENST00000526299 ESF1Q9H501 851 aaKnown RBP7.4□□□□□ -1.22
ECHDC1-219ENST00000526299 RRAGCQ9HB90 399 aa7.4□□□□□ -1.22
ECHDC1-219ENST00000526299 MKL2Q9ULH7 1088 aa7.4□□□□□ -1.22
ECHDC1-219ENST00000526299 UBAP2LQ14157 1087 aaKnown RBP7.39□□□□□ -1.23
ECHDC1-219ENST00000526299 EDARADDQ8WWZ3 215 aa7.39□□□□□ -1.23
ECHDC1-219ENST00000526299 ESYT1Q9BSJ8 1104 aa7.39□□□□□ -1.23
ECHDC1-219ENST00000526299 FURINP09958 794 aa7.38□□□□□ -1.23
ECHDC1-219ENST00000526299 MCCD1P59942 119 aaPredicted RBP7.38□□□□□ -1.23
ECHDC1-219ENST00000526299 PHF24Q9UPV7 400 aa7.38□□□□□ -1.23
ECHDC1-219ENST00000526299 GNRH1P01148 92 aa7.37□□□□□ -1.23
ECHDC1-219ENST00000526299 ZSCAN10Q96SZ4 725 aaPredicted RBP7.37□□□□□ -1.23
ECHDC1-219ENST00000526299 CDCA7Q9BWT1 371 aaPredicted RBP7.37□□□□□ -1.23
ECHDC1-219ENST00000526299 SUV39H2Q9H5I1 410 aa7.37□□□□□ -1.23
ECHDC1-219ENST00000526299 RUBCNLQ9H714 662 aa7.37□□□□□ -1.23
ECHDC1-219ENST00000526299 GOPCQ9HD26 462 aa7.37□□□□□ -1.23
ECHDC1-219ENST00000526299 A0A1B0GTH6 734 aa7.36□□□□□ -1.23
ECHDC1-219ENST00000526299 C2CD2LO14523 706 aa7.36□□□□□ -1.23
ECHDC1-219ENST00000526299 HOXB4P17483 251 aaPredicted RBP7.36□□□□□ -1.23
ECHDC1-219ENST00000526299 GRIN2CQ14957 1233 aa7.36□□□□□ -1.23
ECHDC1-219ENST00000526299 FHDC1Q9C0D6 1143 aaPredicted RBP7.36□□□□□ -1.23
ECHDC1-219ENST00000526299 GDF2Q9UK05 429 aaPredicted RBP7.36□□□□□ -1.23
ECHDC1-219ENST00000526299 HRH3Q9Y5N1 445 aa7.36□□□□□ -1.23
ECHDC1-219ENST00000526299 GPR37L1O60883 481 aa7.35□□□□□ -1.23
ECHDC1-219ENST00000526299 C4orf17Q53FE4 359 aa7.35□□□□□ -1.23
ECHDC1-219ENST00000526299 LINC00114Q6XXX2 140 aa7.35□□□□□ -1.23
ECHDC1-219ENST00000526299 GOLGA6L1Q8N7Z2 621 aa7.35□□□□□ -1.23
ECHDC1-219ENST00000526299 BMP4P12644 408 aa7.34□□□□□ -1.23
ECHDC1-219ENST00000526299 AMPD1P23109 780 aa7.34□□□□□ -1.23
ECHDC1-219ENST00000526299 MSX1P28360 303 aa7.34□□□□□ -1.23
ECHDC1-219ENST00000526299 CTBSQ01459 385 aa7.34□□□□□ -1.23
ECHDC1-219ENST00000526299 GNASQ5JWF2 1037 aa7.34□□□□□ -1.23
ECHDC1-219ENST00000526299 TMEM214Q6NUQ4 689 aaKnown RBP7.34□□□□□ -1.23
ECHDC1-219ENST00000526299 Q8N3U1 123 aa7.34□□□□□ -1.23
ECHDC1-219ENST00000526299 ABHD17AQ96GS6 310 aa7.34□□□□□ -1.23
ECHDC1-219ENST00000526299 XAGE2Q96GT9 111 aa7.34□□□□□ -1.23
ECHDC1-219ENST00000526299 CCDC85AQ96PX6 553 aaPredicted RBP7.34□□□□□ -1.23
ECHDC1-219ENST00000526299 GGA1Q9UJY5 639 aa7.34□□□□□ -1.23
ECHDC1-219ENST00000526299 ZNF330Q9Y3S2 320 aaPredicted RBP7.34□□□□□ -1.23
ECHDC1-219ENST00000526299 CSB-PGBD3P0DP91 1061 aa7.33□□□□□ -1.24
ECHDC1-219ENST00000526299 LBRQ14739 615 aaKnown RBP7.33□□□□□ -1.24
ECHDC1-219ENST00000526299 ALYREFQ86V81 257 aaKnown RBP7.33□□□□□ -1.24
ECHDC1-219ENST00000526299 PGBD3Q8N328 593 aa7.33□□□□□ -1.24
ECHDC1-219ENST00000526299 ZNF592Q92610 1267 aa7.33□□□□□ -1.24
ECHDC1-219ENST00000526299 ATXN7L1Q9ULK2 861 aaPredicted RBP7.33□□□□□ -1.24
ECHDC1-219ENST00000526299 BNIP3LO60238 219 aa7.32□□□□□ -1.24
ECHDC1-219ENST00000526299 STAU1O95793 577 aaKnown RBP7.32□□□□□ -1.24
ECHDC1-219ENST00000526299 MYCP01106 439 aaPredicted RBP7.32□□□□□ -1.24
ECHDC1-219ENST00000526299 FGFR3P22607 806 aa7.32□□□□□ -1.24
ECHDC1-219ENST00000526299 SLCO4C1Q6ZQN7 724 aa7.32□□□□□ -1.24
ECHDC1-219ENST00000526299 NDFIP2Q9NV92 336 aa7.32□□□□□ -1.24
ECHDC1-219ENST00000526299 CEP126Q9P2H0 1117 aa7.32□□□□□ -1.24
ECHDC1-219ENST00000526299 C1QTNF9BB2RNN3 333 aa7.31□□□□□ -1.24
ECHDC1-219ENST00000526299 GTF2E1P29083 439 aaPredicted RBP7.31□□□□□ -1.24
ECHDC1-219ENST00000526299 EFHC2Q5JST6 749 aa7.31□□□□□ -1.24
ECHDC1-219ENST00000526299 MTMR14Q8NCE2 650 aa7.31□□□□□ -1.24
ECHDC1-219ENST00000526299 IL27Q8NEV9 243 aa7.31□□□□□ -1.24
ECHDC1-219ENST00000526299 TSGA10IPQ3SY00 556 aa7.3□□□□□ -1.24
ECHDC1-219ENST00000526299 BTBD6Q96KE9 485 aa7.3□□□□□ -1.24
ECHDC1-219ENST00000526299 NDUFB9Q9Y6M9 179 aa7.3□□□□□ -1.24
ECHDC1-219ENST00000526299 EPXP11678 715 aa7.29□□□□□ -1.24
ECHDC1-219ENST00000526299 ESCO1Q5FWF5 840 aa7.29□□□□□ -1.24
ECHDC1-219ENST00000526299 CD163Q86VB7 1156 aa7.29□□□□□ -1.24
ECHDC1-219ENST00000526299 RHBDD1Q8TEB9 315 aa7.29□□□□□ -1.24
ECHDC1-219ENST00000526299 KRTAP4-8Q9BYQ9 185 aa7.29□□□□□ -1.24
ECHDC1-219ENST00000526299 ETNK1Q9HBU6 452 aa7.29□□□□□ -1.24
ECHDC1-219ENST00000526299 NEURL1BA8MQ27 555 aa7.28□□□□□ -1.24
ECHDC1-219ENST00000526299 GNB5O14775 395 aa7.28□□□□□ -1.24
ECHDC1-219ENST00000526299 CHRNA4P43681 627 aa7.28□□□□□ -1.24
ECHDC1-219ENST00000526299 PPARGC1BQ86YN6 1023 aaKnown RBP7.28□□□□□ -1.24
ECHDC1-219ENST00000526299 RNF135Q8IUD6 432 aa7.28□□□□□ -1.24
ECHDC1-219ENST00000526299 CRISPLD1Q9H336 500 aa7.28□□□□□ -1.24
ECHDC1-219ENST00000526299 SNRKQ9NRH2 765 aa7.28□□□□□ -1.24
ECHDC1-219ENST00000526299 PLA2G4AP47712 749 aa7.27□□□□□ -1.25
ECHDC1-219ENST00000526299 DGKGP49619 791 aa7.27□□□□□ -1.25
ECHDC1-219ENST00000526299 TLR1Q15399 786 aa7.27□□□□□ -1.25
ECHDC1-219ENST00000526299 BANK1Q8NDB2 785 aa7.27□□□□□ -1.25
ECHDC1-219ENST00000526299 ZCCHC2Q9C0B9 1178 aaKnown RBP7.27□□□□□ -1.25
ECHDC1-219ENST00000526299 ARAFP10398 606 aa7.26□□□□□ -1.25
ECHDC1-219ENST00000526299 DNAAF2Q9NVR5 837 aaKnown RBP7.26□□□□□ -1.25
ECHDC1-219ENST00000526299 HCN2Q9UL51 889 aa7.26□□□□□ -1.25
ECHDC1-219ENST00000526299 PIK3R2O00459 728 aa7.25□□□□□ -1.25
ECHDC1-219ENST00000526299 ITGB7P26010 798 aa7.25□□□□□ -1.25
ECHDC1-219ENST00000526299 NEUROD2Q15784 382 aa7.25□□□□□ -1.25
ECHDC1-219ENST00000526299 DOLKQ9UPQ8 538 aa7.25□□□□□ -1.25
ECHDC1-219ENST00000526299 PCDHGC4Q9Y5F7 938 aa7.25□□□□□ -1.25
ECHDC1-219ENST00000526299 SOCS7O14512 581 aa7.24□□□□□ -1.25
ECHDC1-219ENST00000526299 ATP4AP20648 1035 aa7.24□□□□□ -1.25
ECHDC1-219ENST00000526299 USP4Q13107 963 aa7.24□□□□□ -1.25
ECHDC1-219ENST00000526299 DOC2BQ14184 412 aa7.24□□□□□ -1.25
ECHDC1-219ENST00000526299 FIGNL1Q6PIW4 674 aa7.24□□□□□ -1.25
ECHDC1-219ENST00000526299 TBC1D9Q6ZT07 1266 aa7.24□□□□□ -1.25
ECHDC1-219ENST00000526299 CHSY3Q70JA7 882 aa7.24□□□□□ -1.25
ECHDC1-219ENST00000526299 PHTF2Q8N3S3 785 aa7.24□□□□□ -1.25
ECHDC1-219ENST00000526299 NOP53Q9NZM5 478 aaKnown RBP7.24□□□□□ -1.25
ECHDC1-219ENST00000526299 KLF15Q9UIH9 416 aa7.24□□□□□ -1.25
ECHDC1-219ENST00000526299 OXLD1Q5BKU9 147 aa7.23□□□□□ -1.25
ECHDC1-219ENST00000526299 AIDAQ96BJ3 306 aa7.23□□□□□ -1.25
ECHDC1-219ENST00000526299 DCDC2BA2VCK2 349 aa7.22□□□□□ -1.25
ECHDC1-219ENST00000526299 ATXN7O15265 892 aaPredicted RBP7.22□□□□□ -1.25
ECHDC1-219ENST00000526299 CD33P20138 364 aa7.22□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms