RNA–Protein interactions for RNA: ENST00000525717.5

UBXN1-206, Transcript of UBX domain protein 1, humanhuman

TSL 3

Gene UBXN1, Length 1,257 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN1-206ENST00000525717 SMIM5Q71RC9 77 aa28.38■■■□□ 2.13
UBXN1-206ENST00000525717 LINC00116Q8NCU8 138 aa28.38■■■□□ 2.13
UBXN1-206ENST00000525717 KDRP35968 1356 aa28.37■■■□□ 2.13
UBXN1-206ENST00000525717 NPC1L1Q9UHC9 1359 aa28.37■■■□□ 2.13
UBXN1-206ENST00000525717 C4BP0C0L5 1744 aa28.36■■■□□ 2.13
UBXN1-206ENST00000525717 U2SURPO15042 1029 aaKnown RBP28.36■■■□□ 2.13
UBXN1-206ENST00000525717 ITPK1Q13572 414 aa28.36■■■□□ 2.13
UBXN1-206ENST00000525717 TAF1LQ8IZX4 1826 aa28.36■■■□□ 2.13
UBXN1-206ENST00000525717 FLAD1Q8NFF5 587 aa28.35■■■□□ 2.13
UBXN1-206ENST00000525717 AMIGO3Q86WK7 504 aa28.33■■■□□ 2.13
UBXN1-206ENST00000525717 GNPATO15228 680 aa28.32■■■□□ 2.12
UBXN1-206ENST00000525717 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP28.31■■■□□ 2.12
UBXN1-206ENST00000525717 NFATC2IPQ8NCF5 419 aa28.31■■■□□ 2.12
UBXN1-206ENST00000525717 AKAP4Q5JQC9 854 aa28.3■■■□□ 2.12
UBXN1-206ENST00000525717 PTCD1O75127 700 aaKnown RBP28.29■■■□□ 2.12
UBXN1-206ENST00000525717 YY1P25490 414 aa28.29■■■□□ 2.12
UBXN1-206ENST00000525717 PELP1Q8IZL8 1130 aaKnown RBP28.28■■■□□ 2.12
UBXN1-206ENST00000525717 CFAP53Q96M91 514 aa28.28■■■□□ 2.12
UBXN1-206ENST00000525717 MTHFSDQ2M296 383 aaKnown RBP28.27■■■□□ 2.12
UBXN1-206ENST00000525717 SLC4A9Q96Q91 983 aa28.27■■■□□ 2.12
UBXN1-206ENST00000525717 COL3A1P02461 1466 aaPredicted RBP28.27■■■□□ 2.12
UBXN1-206ENST00000525717 LGR6Q9HBX8 967 aa28.26■■■□□ 2.11
UBXN1-206ENST00000525717 SSFA2P28290 1259 aa28.25■■■□□ 2.11
UBXN1-206ENST00000525717 MAP3K5Q99683 1374 aa28.24■■■□□ 2.11
UBXN1-206ENST00000525717 NLGN2Q8NFZ4 835 aa28.24■■■□□ 2.11
UBXN1-206ENST00000525717 RNMTO43148 476 aaKnown RBP28.23■■■□□ 2.11
UBXN1-206ENST00000525717 GPR162Q16538 588 aa28.23■■■□□ 2.11
UBXN1-206ENST00000525717 UBR3Q6ZT12 1888 aa28.23■■■□□ 2.11
UBXN1-206ENST00000525717 COL24A1Q17RW2 1714 aa28.22■■■□□ 2.11
UBXN1-206ENST00000525717 SLC52A2Q9HAB3 445 aa28.22■■■□□ 2.11
UBXN1-206ENST00000525717 PPP2R1AP30153 589 aa28.21■■■□□ 2.11
UBXN1-206ENST00000525717 RTCBQ9Y3I0 505 aaKnown RBP28.21■■■□□ 2.11
UBXN1-206ENST00000525717 SCN11AQ9UI33 1791 aa28.19■■■□□ 2.1
UBXN1-206ENST00000525717 SLC39A6Q13433 755 aa28.18■■■□□ 2.1
UBXN1-206ENST00000525717 TRAPPC3LQ5T215 181 aa28.18■■■□□ 2.1
UBXN1-206ENST00000525717 NUDCQ9Y266 331 aa28.18■■■□□ 2.1
UBXN1-206ENST00000525717 U2AF1L5P0DN76 240 aaPredicted RBP28.15■■■□□ 2.1
UBXN1-206ENST00000525717 PRKAR2BP31323 418 aa28.15■■■□□ 2.1
UBXN1-206ENST00000525717 U2AF1Q01081 240 aaKnown RBP eCLIP28.15■■■□□ 2.1
UBXN1-206ENST00000525717 RC3H1Q5TC82 1133 aaKnown RBP28.15■■■□□ 2.1
UBXN1-206ENST00000525717 GAS2L2Q8NHY3 880 aa28.15■■■□□ 2.1
UBXN1-206ENST00000525717 CNTNAP4Q9C0A0 1308 aa28.15■■■□□ 2.1
UBXN1-206ENST00000525717 CRKLP46109 303 aaKnown RBP28.14■■■□□ 2.1
UBXN1-206ENST00000525717 ARHGEF1Q92888 912 aaKnown RBP28.13■■■□□ 2.09
UBXN1-206ENST00000525717 GNAT3A8MTJ3 354 aa28.12■■■□□ 2.09
UBXN1-206ENST00000525717 RPS6KA4O75676 772 aa28.12■■■□□ 2.09
UBXN1-206ENST00000525717 RFC4P35249 363 aa28.12■■■□□ 2.09
UBXN1-206ENST00000525717 ZNF831Q5JPB2 1677 aa28.11■■■□□ 2.09
UBXN1-206ENST00000525717 DNAJC10Q8IXB1 793 aa28.11■■■□□ 2.09
UBXN1-206ENST00000525717 PHACTR3Q96KR7 559 aa28.11■■■□□ 2.09
UBXN1-206ENST00000525717 RSPH6AQ9H0K4 717 aa28.11■■■□□ 2.09
UBXN1-206ENST00000525717 MRC1P22897 1456 aa28.1■■■□□ 2.09
UBXN1-206ENST00000525717 COL5A3P25940 1745 aaPredicted RBP28.1■■■□□ 2.09
UBXN1-206ENST00000525717 TEFQ10587 303 aa28.1■■■□□ 2.09
UBXN1-206ENST00000525717 CD2APQ9Y5K6 639 aa28.1■■■□□ 2.09
UBXN1-206ENST00000525717 MMP10P09238 476 aa28.09■■■□□ 2.09
UBXN1-206ENST00000525717 ADRA2BP18089 450 aa28.09■■■□□ 2.09
UBXN1-206ENST00000525717 TTC5Q8N0Z6 440 aa28.08■■■□□ 2.09
UBXN1-206ENST00000525717 WWC3Q9ULE0 1092 aa28.08■■■□□ 2.09
UBXN1-206ENST00000525717 IL17REQ8NFR9 667 aa28.07■■■□□ 2.08
UBXN1-206ENST00000525717 TJP1Q07157 1748 aa28.06■■■□□ 2.08
UBXN1-206ENST00000525717 VIRMAQ69YN4 1812 aaKnown RBP28.06■■■□□ 2.08
UBXN1-206ENST00000525717 NLGN1Q8N2Q7 840 aa28.05■■■□□ 2.08
UBXN1-206ENST00000525717 CCDC87Q9NVE4 849 aa28.05■■■□□ 2.08
UBXN1-206ENST00000525717 SRP68Q9UHB9 627 aaKnown RBP28.05■■■□□ 2.08
UBXN1-206ENST00000525717 YBX3P16989 372 aaKnown RBP eCLIP28.04■■■□□ 2.08
UBXN1-206ENST00000525717 INTS5Q6P9B9 1019 aaKnown RBP28.04■■■□□ 2.08
UBXN1-206ENST00000525717 MYH14Q7Z406 1995 aaKnown RBP28.04■■■□□ 2.08
UBXN1-206ENST00000525717 GYS1P13807 737 aa28.03■■■□□ 2.08
UBXN1-206ENST00000525717 ADAMTS7Q9UKP4 1686 aa28.03■■■□□ 2.08
UBXN1-206ENST00000525717 KCPQ6ZWJ8 1503 aa28.02■■■□□ 2.08
UBXN1-206ENST00000525717 FCHSD2O94868 740 aa28.01■■■□□ 2.07
UBXN1-206ENST00000525717 CYP19A1P11511 503 aaPredicted RBP28.01■■■□□ 2.07
UBXN1-206ENST00000525717 DDX10Q13206 875 aaKnown RBP28.01■■■□□ 2.07
UBXN1-206ENST00000525717 PARP3Q9Y6F1 533 aa28■■■□□ 2.07
UBXN1-206ENST00000525717 RTF1Q92541 710 aaKnown RBP27.99■■■□□ 2.07
UBXN1-206ENST00000525717 GRIN3BO60391 1043 aa27.98■■■□□ 2.07
UBXN1-206ENST00000525717 CICQ96RK0 1608 aaPredicted RBP27.98■■■□□ 2.07
UBXN1-206ENST00000525717 ZPR1O75312 459 aa27.97■■■□□ 2.07
UBXN1-206ENST00000525717 CANXP27824 592 aaKnown RBP27.97■■■□□ 2.07
UBXN1-206ENST00000525717 ZNF790Q6PG37 636 aa27.97■■■□□ 2.07
UBXN1-206ENST00000525717 MCM10Q7L590 875 aa27.97■■■□□ 2.07
UBXN1-206ENST00000525717 ZNF496Q96IT1 587 aaPredicted RBP27.97■■■□□ 2.07
UBXN1-206ENST00000525717 ZBTB1Q9Y2K1 713 aa27.97■■■□□ 2.07
UBXN1-206ENST00000525717 C4AP0C0L4 1744 aa27.97■■■□□ 2.07
UBXN1-206ENST00000525717 USP42Q9H9J4 1324 aaKnown RBP27.96■■■□□ 2.07
UBXN1-206ENST00000525717 BTBD11A6QL63 1104 aa27.96■■■□□ 2.07
UBXN1-206ENST00000525717 NEFMP07197 916 aa27.96■■■□□ 2.07
UBXN1-206ENST00000525717 FKBP8Q14318 412 aa27.96■■■□□ 2.07
UBXN1-206ENST00000525717 VSIG10Q8N0Z9 540 aa27.96■■■□□ 2.07
UBXN1-206ENST00000525717 SOS1Q07889 1333 aaPredicted RBP27.95■■■□□ 2.07
UBXN1-206ENST00000525717 DCTN1Q14203 1278 aa27.95■■■□□ 2.06
UBXN1-206ENST00000525717 ZNF784Q8NCA9 323 aaPredicted RBP27.95■■■□□ 2.06
UBXN1-206ENST00000525717 STARD3NLO95772 234 aa27.94■■■□□ 2.06
UBXN1-206ENST00000525717 USPL1Q5W0Q7 1092 aa27.94■■■□□ 2.06
UBXN1-206ENST00000525717 CHD4Q14839 1912 aa27.94■■■□□ 2.06
UBXN1-206ENST00000525717 KCNQ3O43525 872 aa27.93■■■□□ 2.06
UBXN1-206ENST00000525717 ZNF330Q9Y3S2 320 aaPredicted RBP27.93■■■□□ 2.06
UBXN1-206ENST00000525717 CEMIPQ8WUJ3 1361 aa27.93■■■□□ 2.06
UBXN1-206ENST00000525717 COL15A1P39059 1388 aa27.92■■■□□ 2.06
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms