RNA–Protein interactions for RNA: ENST00000525653.1

HHLA3-206, Transcript of HERV-H LTR-associating 3, humanhuman

TSL 3

Gene HHLA3, Length 689 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HHLA3-206ENST00000525653 CD2APQ9Y5K6 639 aa12.19□□□□□ -0.46
HHLA3-206ENST00000525653 LOC102724428A0A0B4J2F2 783 aa12.18□□□□□ -0.46
HHLA3-206ENST00000525653 SIK1P57059 783 aa12.18□□□□□ -0.46
HHLA3-206ENST00000525653 AMOTQ4VCS5 1084 aa12.18□□□□□ -0.46
HHLA3-206ENST00000525653 CCER1Q8TC90 406 aaPredicted RBP12.18□□□□□ -0.46
HHLA3-206ENST00000525653 PANK3Q9H999 370 aa12.18□□□□□ -0.46
HHLA3-206ENST00000525653 ERVV-2B6SEH9 535 aa12.17□□□□□ -0.46
HHLA3-206ENST00000525653 PLEKHO1Q53GL0 409 aaPredicted RBP12.17□□□□□ -0.46
HHLA3-206ENST00000525653 KNSTRNQ9Y448 316 aa12.17□□□□□ -0.46
HHLA3-206ENST00000525653 TNNT2P45379 298 aaPredicted RBP12.16□□□□□ -0.46
HHLA3-206ENST00000525653 DCAF5Q96JK2 942 aa12.16□□□□□ -0.46
HHLA3-206ENST00000525653 MORC1Q86VD1 984 aa12.15□□□□□ -0.46
HHLA3-206ENST00000525653 PELP1Q8IZL8 1130 aaKnown RBP12.15□□□□□ -0.46
HHLA3-206ENST00000525653 NLGN2Q8NFZ4 835 aa12.15□□□□□ -0.46
HHLA3-206ENST00000525653 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.14□□□□□ -0.47
HHLA3-206ENST00000525653 MYCNP04198 464 aaPredicted RBP12.14□□□□□ -0.47
HHLA3-206ENST00000525653 ATP6V1AP38606 617 aa12.14□□□□□ -0.47
HHLA3-206ENST00000525653 MSL1Q68DK7 614 aa12.14□□□□□ -0.47
HHLA3-206ENST00000525653 ASAP1Q9ULH1 1129 aa12.14□□□□□ -0.47
HHLA3-206ENST00000525653 KDRP35968 1356 aa12.14□□□□□ -0.47
HHLA3-206ENST00000525653 COL5A3P25940 1745 aaPredicted RBP12.14□□□□□ -0.47
HHLA3-206ENST00000525653 SCN11AQ9UI33 1791 aa12.13□□□□□ -0.47
HHLA3-206ENST00000525653 DSG3P32926 999 aa12.13□□□□□ -0.47
HHLA3-206ENST00000525653 ATG3Q9NT62 314 aa12.13□□□□□ -0.47
HHLA3-206ENST00000525653 CICQ96RK0 1608 aaPredicted RBP12.12□□□□□ -0.47
HHLA3-206ENST00000525653 VIRMAQ69YN4 1812 aaKnown RBP12.12□□□□□ -0.47
HHLA3-206ENST00000525653 KIF13BQ9NQT8 1826 aa12.12□□□□□ -0.47
HHLA3-206ENST00000525653 GNPATO15228 680 aa12.12□□□□□ -0.47
HHLA3-206ENST00000525653 PHF14O94880 888 aa12.12□□□□□ -0.47
HHLA3-206ENST00000525653 C1orf141Q5JVX7 400 aa12.12□□□□□ -0.47
HHLA3-206ENST00000525653 RC3H1Q5TC82 1133 aaKnown RBP12.12□□□□□ -0.47
HHLA3-206ENST00000525653 ZNF530Q6P9A1 599 aaPredicted RBP12.12□□□□□ -0.47
HHLA3-206ENST00000525653 LINC00116Q8NCU8 138 aa12.12□□□□□ -0.47
HHLA3-206ENST00000525653 ZNF219Q9P2Y4 722 aaPredicted RBP12.12□□□□□ -0.47
HHLA3-206ENST00000525653 MYH14Q7Z406 1995 aaKnown RBP12.11□□□□□ -0.47
HHLA3-206ENST00000525653 ITPK1Q13572 414 aa12.11□□□□□ -0.47
HHLA3-206ENST00000525653 RTCBQ9Y3I0 505 aaKnown RBP12.11□□□□□ -0.47
HHLA3-206ENST00000525653 CNTNAP4Q9C0A0 1308 aa12.11□□□□□ -0.47
HHLA3-206ENST00000525653 YBX3P16989 372 aaKnown RBP eCLIP12.1□□□□□ -0.476e-6■■■■□ 20
HHLA3-206ENST00000525653 MTHFSP49914 203 aa12.1□□□□□ -0.47
HHLA3-206ENST00000525653 CABP4P57796 275 aa12.1□□□□□ -0.47
HHLA3-206ENST00000525653 NLGN1Q8N2Q7 840 aa12.1□□□□□ -0.47
HHLA3-206ENST00000525653 KDM6AO15550 1401 aaPredicted RBP12.1□□□□□ -0.47
HHLA3-206ENST00000525653 C1QTNF8P60827 252 aa12.09□□□□□ -0.47
HHLA3-206ENST00000525653 AMER1Q5JTC6 1135 aaPredicted RBP12.09□□□□□ -0.47
HHLA3-206ENST00000525653 TRAPPC3LQ5T215 181 aa12.09□□□□□ -0.47
HHLA3-206ENST00000525653 GIGYF1O75420 1035 aaPredicted RBP12.08□□□□□ -0.48
HHLA3-206ENST00000525653 RPS6KA4O75676 772 aa12.08□□□□□ -0.48
HHLA3-206ENST00000525653 IL13P35225 146 aa12.08□□□□□ -0.48
HHLA3-206ENST00000525653 SULT6B1Q6IMI4 303 aa12.08□□□□□ -0.48
HHLA3-206ENST00000525653 AMIGO3Q86WK7 504 aa12.08□□□□□ -0.48
HHLA3-206ENST00000525653 RBM42Q9BTD8 480 aaKnown RBP12.08□□□□□ -0.48
HHLA3-206ENST00000525653 C4AP0C0L4 1744 aa12.08□□□□□ -0.48
HHLA3-206ENST00000525653 KIF7Q2M1P5 1343 aa12.08□□□□□ -0.48
HHLA3-206ENST00000525653 NPC1L1Q9UHC9 1359 aa12.07□□□□□ -0.48
HHLA3-206ENST00000525653 FOXD4L1Q9NU39 408 aa12.07□□□□□ -0.48
HHLA3-206ENST00000525653 UTRNP46939 3433 aa12.07□□□□□ -0.48
HHLA3-206ENST00000525653 MMP10P09238 476 aa12.06□□□□□ -0.48
HHLA3-206ENST00000525653 RFC4P35249 363 aa12.06□□□□□ -0.48
HHLA3-206ENST00000525653 TGFB2P61812 414 aa12.06□□□□□ -0.48
HHLA3-206ENST00000525653 AKAP4Q5JQC9 854 aa12.06□□□□□ -0.48
HHLA3-206ENST00000525653 AEBP1Q8IUX7 1158 aa12.06□□□□□ -0.48
HHLA3-206ENST00000525653 SLC4A9Q96Q91 983 aa12.05□□□□□ -0.48
HHLA3-206ENST00000525653 CCDC87Q9NVE4 849 aa12.05□□□□□ -0.48
HHLA3-206ENST00000525653 MRC1P22897 1456 aa12.05□□□□□ -0.48
HHLA3-206ENST00000525653 BRCA1P38398 1863 aaKnown RBP12.05□□□□□ -0.48
HHLA3-206ENST00000525653 TJP1Q07157 1748 aa12.05□□□□□ -0.48
HHLA3-206ENST00000525653 ADCY9O60503 1353 aa12.05□□□□□ -0.48
HHLA3-206ENST00000525653 C10orf71Q711Q0 1435 aa12.04□□□□□ -0.48
HHLA3-206ENST00000525653 ATP10DQ9P241 1426 aa12.04□□□□□ -0.48
HHLA3-206ENST00000525653 ADAMTS7Q9UKP4 1686 aa12.04□□□□□ -0.48
HHLA3-206ENST00000525653 KIAA1551Q9HCM1 1747 aa12.04□□□□□ -0.48
HHLA3-206ENST00000525653 NFATC2IPQ8NCF5 419 aa12.04□□□□□ -0.48
HHLA3-206ENST00000525653 ARHGEF1Q92888 912 aaKnown RBP12.04□□□□□ -0.48
HHLA3-206ENST00000525653 N4BP2Q86UW6 1770 aaPredicted RBP12.04□□□□□ -0.48
HHLA3-206ENST00000525653 ARFGEF1Q9Y6D6 1849 aa12.04□□□□□ -0.48
HHLA3-206ENST00000525653 SENP3-EIF4A1A0A087X0R7 540 aa12.03□□□□□ -0.48
HHLA3-206ENST00000525653 PER1O15534 1290 aaPredicted RBP12.03□□□□□ -0.48
HHLA3-206ENST00000525653 DIAPH1O60610 1272 aaKnown RBP12.03□□□□□ -0.48
HHLA3-206ENST00000525653 PTCD1O75127 700 aaKnown RBP12.03□□□□□ -0.48
HHLA3-206ENST00000525653 CRKLP46109 303 aaKnown RBP12.03□□□□□ -0.48
HHLA3-206ENST00000525653 SLC52A2Q9HAB3 445 aa12.03□□□□□ -0.48
HHLA3-206ENST00000525653 PARP3Q9Y6F1 533 aa12.03□□□□□ -0.48
HHLA3-206ENST00000525653 PXDNLA1KZ92 1463 aa12.02□□□□□ -0.48
HHLA3-206ENST00000525653 GYS1P13807 737 aa12.02□□□□□ -0.49
HHLA3-206ENST00000525653 SMIM5Q71RC9 77 aa12.02□□□□□ -0.49
HHLA3-206ENST00000525653 GPBP1L1Q9HC44 474 aaPredicted RBP12.02□□□□□ -0.49
HHLA3-206ENST00000525653 UBR2Q8IWV8 1755 aa12.01□□□□□ -0.49
HHLA3-206ENST00000525653 USP42Q9H9J4 1324 aaKnown RBP12.01□□□□□ -0.49
HHLA3-206ENST00000525653 RNMTO43148 476 aaKnown RBP12□□□□□ -0.49
HHLA3-206ENST00000525653 VSIG10Q8N0Z9 540 aa12□□□□□ -0.49
HHLA3-206ENST00000525653 GOLGB1Q14789 3259 aaKnown RBP12□□□□□ -0.49
HHLA3-206ENST00000525653 CC2D1BQ5T0F9 858 aaKnown RBP11.99□□□□□ -0.49
HHLA3-206ENST00000525653 COL3A1P02461 1466 aaPredicted RBP11.98□□□□□ -0.49
HHLA3-206ENST00000525653 ZPR1O75312 459 aa11.98□□□□□ -0.49
HHLA3-206ENST00000525653 HMOX1P09601 288 aa11.98□□□□□ -0.49
HHLA3-206ENST00000525653 GAS2L2Q8NHY3 880 aa11.98□□□□□ -0.49
HHLA3-206ENST00000525653 SIPA1L3O60292 1781 aaPredicted RBP11.97□□□□□ -0.49
HHLA3-206ENST00000525653 KCPQ6ZWJ8 1503 aa11.97□□□□□ -0.49
HHLA3-206ENST00000525653 SOS1Q07889 1333 aaPredicted RBP11.97□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms