RNA–Protein interactions for RNA: ENST00000525537.2

ATM-208, Transcript of ATM serine/threonine kinase, humanhuman

TSL 4

Gene ATM, Length 583 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATM-208ENST00000525537 GMPR2Q9P2T1 348 aaKnown RBP9.37□□□□□ -0.91
ATM-208ENST00000525537 ESPNB1AK53 854 aa9.36□□□□□ -0.91
ATM-208ENST00000525537 SEPT12Q8IYM1 358 aa9.36□□□□□ -0.91
ATM-208ENST00000525537 PKD2L1Q9P0L9 805 aa9.36□□□□□ -0.91
ATM-208ENST00000525537 PCDHB11Q9Y5F2 797 aa9.36□□□□□ -0.91
ATM-208ENST00000525537 FKBP5Q13451 457 aaPredicted RBP9.35□□□□□ -0.91
ATM-208ENST00000525537 PLA2G2CQ5R387 149 aa9.35□□□□□ -0.91
ATM-208ENST00000525537 COL26A1Q96A83 441 aa9.35□□□□□ -0.91
ATM-208ENST00000525537 MKNK1Q9BUB5 465 aa9.35□□□□□ -0.91
ATM-208ENST00000525537 BCL11AQ9H165 835 aa9.35□□□□□ -0.91
ATM-208ENST00000525537 C11orf95C9JLR9 678 aaPredicted RBP9.34□□□□□ -0.91
ATM-208ENST00000525537 LGR5O75473 907 aa9.34□□□□□ -0.91
ATM-208ENST00000525537 AVPP01185 164 aa9.34□□□□□ -0.91
ATM-208ENST00000525537 TAGLNQ01995 201 aaKnown RBP9.34□□□□□ -0.91
ATM-208ENST00000525537 AGERQ15109 404 aa9.34□□□□□ -0.91
ATM-208ENST00000525537 C4orf48Q5BLP8 95 aa9.34□□□□□ -0.91
ATM-208ENST00000525537 RGL4Q8IZJ4 473 aa9.34□□□□□ -0.91
ATM-208ENST00000525537 TSEN2Q8NCE0 465 aaKnown RBP9.34□□□□□ -0.91
ATM-208ENST00000525537 BAP1Q92560 729 aa9.34□□□□□ -0.91
ATM-208ENST00000525537 CDV3Q9UKY7 258 aaKnown RBP9.34□□□□□ -0.91
ATM-208ENST00000525537 RECKO95980 971 aa9.33□□□□□ -0.92
ATM-208ENST00000525537 ZNF511Q8NB15 262 aa9.33□□□□□ -0.92
ATM-208ENST00000525537 FOXJ1Q92949 421 aa9.33□□□□□ -0.92
ATM-208ENST00000525537 C1QTNF2Q9BXJ5 285 aa9.33□□□□□ -0.92
ATM-208ENST00000525537 MTMR3Q13615 1198 aa9.32□□□□□ -0.92
ATM-208ENST00000525537 LCE2CQ5TA81 110 aa9.32□□□□□ -0.92
ATM-208ENST00000525537 CAPN12Q6ZSI9 719 aa9.32□□□□□ -0.92
ATM-208ENST00000525537 TRMT44Q8IYL2 757 aaKnown RBP9.32□□□□□ -0.92
ATM-208ENST00000525537 HELQQ8TDG4 1101 aa9.32□□□□□ -0.92
ATM-208ENST00000525537 FOXC1Q12948 553 aa9.31□□□□□ -0.92
ATM-208ENST00000525537 EAPPQ56P03 285 aaPredicted RBP9.31□□□□□ -0.92
ATM-208ENST00000525537 PURBQ96QR8 312 aaKnown RBP9.31□□□□□ -0.92
ATM-208ENST00000525537 FOXO3O43524 673 aa9.3□□□□□ -0.92
ATM-208ENST00000525537 MYCP01106 439 aaPredicted RBP9.3□□□□□ -0.92
ATM-208ENST00000525537 NPR3P17342 541 aa9.3□□□□□ -0.92
ATM-208ENST00000525537 IGFBP4P22692 258 aa9.3□□□□□ -0.92
ATM-208ENST00000525537 ZC3H6P61129 1189 aaKnown RBP9.3□□□□□ -0.92
ATM-208ENST00000525537 LINC01559Q495D7 138 aa9.3□□□□□ -0.92
ATM-208ENST00000525537 SERBP1Q8NC51 408 aaKnown RBP eCLIP9.3□□□□□ -0.92
ATM-208ENST00000525537 SREK1Q8WXA9 508 aaKnown RBP9.3□□□□□ -0.92
ATM-208ENST00000525537 SLC6A16Q9GZN6 736 aa9.3□□□□□ -0.92
ATM-208ENST00000525537 AXIN1O15169 862 aa9.29□□□□□ -0.92
ATM-208ENST00000525537 FAM13AO94988 1023 aa9.29□□□□□ -0.92
ATM-208ENST00000525537 DRC1Q96MC2 740 aa9.29□□□□□ -0.92
ATM-208ENST00000525537 RBCK1Q9BYM8 510 aa9.29□□□□□ -0.92
ATM-208ENST00000525537 ZNF358Q9NW07 568 aa9.29□□□□□ -0.92
ATM-208ENST00000525537 HMGB1P09429 215 aaKnown RBP9.28□□□□□ -0.92
ATM-208ENST00000525537 TOR4AQ9NXH8 423 aa9.28□□□□□ -0.92
ATM-208ENST00000525537 SMCPP49901 116 aaPredicted RBP9.27□□□□□ -0.93
ATM-208ENST00000525537 NAA30Q147X3 362 aaPredicted RBP9.27□□□□□ -0.93
ATM-208ENST00000525537 CTC1Q2NKJ3 1217 aa9.27□□□□□ -0.93
ATM-208ENST00000525537 TSNAXIP1Q2TAA8 658 aa9.27□□□□□ -0.93
ATM-208ENST00000525537 TMEM229AB2RXF0 380 aa9.25□□□□□ -0.93
ATM-208ENST00000525537 P4HBP07237 508 aaKnown RBP9.25□□□□□ -0.93
ATM-208ENST00000525537 MRPL58Q14197 206 aaKnown RBP9.25□□□□□ -0.93
ATM-208ENST00000525537 TMC7Q7Z402 723 aa9.25□□□□□ -0.93
ATM-208ENST00000525537 PUS7Q96PZ0 661 aaKnown RBP9.25□□□□□ -0.93
ATM-208ENST00000525537 KCTD15Q96SI1 283 aaPredicted RBP9.25□□□□□ -0.93
ATM-208ENST00000525537 WASLO00401 505 aaPredicted RBP9.24□□□□□ -0.93
ATM-208ENST00000525537 NDUFB5O43674 189 aa9.24□□□□□ -0.93
ATM-208ENST00000525537 SCTRP47872 440 aa9.24□□□□□ -0.93
ATM-208ENST00000525537 GAS2L2Q8NHY3 880 aa9.24□□□□□ -0.93
ATM-208ENST00000525537 TERTO14746 1132 aaKnown RBP9.23□□□□□ -0.93
ATM-208ENST00000525537 BACH1O14867 736 aa9.23□□□□□ -0.93
ATM-208ENST00000525537 HSP90B1P14625 803 aaKnown RBP9.23□□□□□ -0.93
ATM-208ENST00000525537 SH3BP2P78314 561 aa9.23□□□□□ -0.93
ATM-208ENST00000525537 NAALADL2Q58DX5 795 aa9.23□□□□□ -0.93
ATM-208ENST00000525537 SCG3Q8WXD2 468 aaKnown RBP9.23□□□□□ -0.93
ATM-208ENST00000525537 CITED4Q96RK1 184 aa9.23□□□□□ -0.93
ATM-208ENST00000525537 BACH2Q9BYV9 841 aa9.23□□□□□ -0.93
ATM-208ENST00000525537 FCF1Q9Y324 198 aaKnown RBP9.23□□□□□ -0.93
ATM-208ENST00000525537 TREHO43280 583 aa9.22□□□□□ -0.93
ATM-208ENST00000525537 MPSTP25325 297 aa9.22□□□□□ -0.93
ATM-208ENST00000525537 RAB15P59190 212 aa9.22□□□□□ -0.93
ATM-208ENST00000525537 ERVK-9P63128 1117 aa9.22□□□□□ -0.93
ATM-208ENST00000525537 FMR1Q06787 632 aaKnown RBP eCLIP9.22□□□□□ -0.93
ATM-208ENST00000525537 MAP4K5Q9Y4K4 846 aa9.22□□□□□ -0.93
ATM-208ENST00000525537 ATAD2Q6PL18 1390 aa9.22□□□□□ -0.93
ATM-208ENST00000525537 ERVH48-1M5A8F1 160 aa9.21□□□□□ -0.94
ATM-208ENST00000525537 SCAMP3O14828 347 aaKnown RBP9.21□□□□□ -0.94
ATM-208ENST00000525537 RPIAP49247 311 aa9.21□□□□□ -0.94
ATM-208ENST00000525537 SCNN1DP51172 638 aa9.21□□□□□ -0.94
ATM-208ENST00000525537 FGD1P98174 961 aa9.21□□□□□ -0.94
ATM-208ENST00000525537 SF3A1Q15459 793 aaKnown RBP9.21□□□□□ -0.94
ATM-208ENST00000525537 INTS6LQ5JSJ4 861 aaKnown RBP9.21□□□□□ -0.94
ATM-208ENST00000525537 CYP4X1Q8N118 509 aa9.21□□□□□ -0.94
ATM-208ENST00000525537 VTI1AQ96AJ9 217 aa9.21□□□□□ -0.94
ATM-208ENST00000525537 ESF1Q9H501 851 aaKnown RBP9.21□□□□□ -0.94
ATM-208ENST00000525537 UTP3Q9NQZ2 479 aaKnown RBP eCLIP9.21□□□□□ -0.94
ATM-208ENST00000525537 BRPF3Q9ULD4 1205 aa9.21□□□□□ -0.94
ATM-208ENST00000525537 SNRPBP14678 240 aaKnown RBP9.2□□□□□ -0.94
ATM-208ENST00000525537 ERCC5P28715 1186 aaPredicted RBP9.2□□□□□ -0.94
ATM-208ENST00000525537 EPHA4P54764 986 aa9.2□□□□□ -0.94
ATM-208ENST00000525537 GDF10P55107 478 aa9.2□□□□□ -0.94
ATM-208ENST00000525537 CC2D2BQ6DHV5 1058 aa9.2□□□□□ -0.94
ATM-208ENST00000525537 C16orf46Q6P387 395 aa9.2□□□□□ -0.94
ATM-208ENST00000525537 TNS4Q8IZW8 715 aa9.2□□□□□ -0.94
ATM-208ENST00000525537 FAM177A1Q8N128 213 aaPredicted RBP9.2□□□□□ -0.94
ATM-208ENST00000525537 ALKBH2Q6NS38 261 aa9.19□□□□□ -0.94
ATM-208ENST00000525537 UBXN4Q92575 508 aa9.19□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms