RNA–Protein interactions for RNA: ENST00000525276.1

CTTN-209, Transcript of cortactin, humanhuman

TSL 3

Gene CTTN, Length 584 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTTN-209ENST00000525276 FLAD1Q8NFF5 587 aa15.53■□□□□ 0.08
CTTN-209ENST00000525276 PIGBQ92521 554 aa15.53■□□□□ 0.08
CTTN-209ENST00000525276 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP15.52■□□□□ 0.08
CTTN-209ENST00000525276 NKX1-1Q15270 411 aaPredicted RBP15.52■□□□□ 0.08
CTTN-209ENST00000525276 KIF13BQ9NQT8 1826 aa15.52■□□□□ 0.07
CTTN-209ENST00000525276 PHF14O94880 888 aa15.5■□□□□ 0.07
CTTN-209ENST00000525276 ITPK1Q13572 414 aa15.5■□□□□ 0.07
CTTN-209ENST00000525276 EIF4A2Q14240 407 aaKnown RBP15.5■□□□□ 0.07
CTTN-209ENST00000525276 AK7Q96M32 723 aa15.5■□□□□ 0.07
CTTN-209ENST00000525276 PXDNLA1KZ92 1463 aa15.49■□□□□ 0.07
CTTN-209ENST00000525276 SSFA2P28290 1259 aa15.49■□□□□ 0.07
CTTN-209ENST00000525276 CNGB1Q14028 1251 aaPredicted RBP15.49■□□□□ 0.07
CTTN-209ENST00000525276 SMARCC1Q92922 1105 aaPredicted RBP15.49■□□□□ 0.07
CTTN-209ENST00000525276 EYA1Q99502 592 aa15.49■□□□□ 0.07
CTTN-209ENST00000525276 LOC102724428A0A0B4J2F2 783 aa15.48■□□□□ 0.07
CTTN-209ENST00000525276 SIK1P57059 783 aa15.48■□□□□ 0.07
CTTN-209ENST00000525276 N4BP2Q86UW6 1770 aaPredicted RBP15.47■□□□□ 0.07
CTTN-209ENST00000525276 MTHFSP49914 203 aa15.47■□□□□ 0.07
CTTN-209ENST00000525276 ASAP1Q9ULH1 1129 aa15.47■□□□□ 0.07
CTTN-209ENST00000525276 KDRP35968 1356 aa15.46■□□□□ 0.07
CTTN-209ENST00000525276 BRCA1P38398 1863 aaKnown RBP15.46■□□□□ 0.06
CTTN-209ENST00000525276 DNAJC5GQ8N7S2 189 aa15.45■□□□□ 0.06
CTTN-209ENST00000525276 SLC4A9Q96Q91 983 aa15.45■□□□□ 0.06
CTTN-209ENST00000525276 C10orf71Q711Q0 1435 aa15.44■□□□□ 0.06
CTTN-209ENST00000525276 COL5A3P25940 1745 aaPredicted RBP15.43■□□□□ 0.06
CTTN-209ENST00000525276 GNPATO15228 680 aa15.43■□□□□ 0.06
CTTN-209ENST00000525276 MMP10P09238 476 aa15.43■□□□□ 0.06
CTTN-209ENST00000525276 HMGB2P26583 209 aaKnown RBP15.43■□□□□ 0.06
CTTN-209ENST00000525276 IL13P35225 146 aa15.43■□□□□ 0.06
CTTN-209ENST00000525276 ATG3Q9NT62 314 aa15.43■□□□□ 0.06
CTTN-209ENST00000525276 MYH14Q7Z406 1995 aaKnown RBP15.42■□□□□ 0.06
CTTN-209ENST00000525276 ZNF831Q5JPB2 1677 aa15.42■□□□□ 0.06
CTTN-209ENST00000525276 PHKG2P15735 406 aa15.42■□□□□ 0.06
CTTN-209ENST00000525276 SPG7Q9UQ90 795 aa15.42■□□□□ 0.06
CTTN-209ENST00000525276 PLEKHG2Q9H7P9 1386 aa15.41■□□□□ 0.06
CTTN-209ENST00000525276 DDX10Q13206 875 aaKnown RBP15.41■□□□□ 0.06
CTTN-209ENST00000525276 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP15.41■□□□□ 0.06
CTTN-209ENST00000525276 TMOD3Q9NYL9 352 aa15.41■□□□□ 0.06
CTTN-209ENST00000525276 C4AP0C0L4 1744 aa15.4■□□□□ 0.06
CTTN-209ENST00000525276 A0A0G2JLW4 131 aa15.4■□□□□ 0.06
CTTN-209ENST00000525276 DIAPH1O60610 1272 aaKnown RBP15.4■□□□□ 0.06
CTTN-209ENST00000525276 ATP6V1AP38606 617 aa15.4■□□□□ 0.06
CTTN-209ENST00000525276 KCNA3P22001 575 aa15.39■□□□□ 0.05
CTTN-209ENST00000525276 PPP2R1AP30153 589 aa15.39■□□□□ 0.05
CTTN-209ENST00000525276 SULT6B1Q6IMI4 303 aa15.39■□□□□ 0.05
CTTN-209ENST00000525276 CFAP53Q96M91 514 aa15.39■□□□□ 0.05
CTTN-209ENST00000525276 NMRK2Q9NPI5 230 aa15.39■□□□□ 0.05
CTTN-209ENST00000525276 APLP1P51693 650 aa15.38■□□□□ 0.05
CTTN-209ENST00000525276 TGFB2P61812 414 aa15.38■□□□□ 0.05
CTTN-209ENST00000525276 AEBP1Q8IUX7 1158 aa15.38■□□□□ 0.05
CTTN-209ENST00000525276 ARFGEF1Q9Y6D6 1849 aa15.38■□□□□ 0.05
CTTN-209ENST00000525276 WDR90Q96KV7 1748 aa15.37■□□□□ 0.05
CTTN-209ENST00000525276 KDM6AO15550 1401 aaPredicted RBP15.37■□□□□ 0.05
CTTN-209ENST00000525276 TOMM70O94826 608 aa15.37■□□□□ 0.05
CTTN-209ENST00000525276 GYS1P13807 737 aa15.37■□□□□ 0.05
CTTN-209ENST00000525276 DPEP1P16444 411 aa15.37■□□□□ 0.05
CTTN-209ENST00000525276 PLEKHO1Q53GL0 409 aaPredicted RBP15.37■□□□□ 0.05
CTTN-209ENST00000525276 IFNL2Q8IZJ0 200 aa15.37■□□□□ 0.05
CTTN-209ENST00000525276 ARHGEF1Q92888 912 aaKnown RBP15.37■□□□□ 0.05
CTTN-209ENST00000525276 BCS1LQ9Y276 419 aa15.37■□□□□ 0.05
CTTN-209ENST00000525276 COL3A1P02461 1466 aaPredicted RBP15.37■□□□□ 0.05
CTTN-209ENST00000525276 AMOTQ4VCS5 1084 aa15.36■□□□□ 0.05
CTTN-209ENST00000525276 ADAMTS7Q9UKP4 1686 aa15.35■□□□□ 0.05
CTTN-209ENST00000525276 CNTNAP4Q9C0A0 1308 aa15.35■□□□□ 0.05
CTTN-209ENST00000525276 U2SURPO15042 1029 aaKnown RBP15.34■□□□□ 0.05
CTTN-209ENST00000525276 HMOX1P09601 288 aa15.34■□□□□ 0.05
CTTN-209ENST00000525276 HTRA3P83110 453 aa15.34■□□□□ 0.05
CTTN-209ENST00000525276 TRAPPC3LQ5T215 181 aa15.34■□□□□ 0.05
CTTN-209ENST00000525276 RC3H1Q5TC82 1133 aaKnown RBP15.34■□□□□ 0.05
CTTN-209ENST00000525276 NLGN1Q8N2Q7 840 aa15.34■□□□□ 0.05
CTTN-209ENST00000525276 RTCBQ9Y3I0 505 aaKnown RBP15.34■□□□□ 0.05
CTTN-209ENST00000525276 ADRA2BP18089 450 aa15.33■□□□□ 0.04
CTTN-209ENST00000525276 RALBP1Q15311 655 aa15.33■□□□□ 0.04
CTTN-209ENST00000525276 ZNF530Q6P9A1 599 aaPredicted RBP15.33■□□□□ 0.04
CTTN-209ENST00000525276 ARHGAP27Q6ZUM4 889 aa15.33■□□□□ 0.04
CTTN-209ENST00000525276 NUDCQ9Y266 331 aa15.33■□□□□ 0.04
CTTN-209ENST00000525276 TJP1Q07157 1748 aa15.32■□□□□ 0.04
CTTN-209ENST00000525276 SBF1O95248 1867 aa15.32■□□□□ 0.04
CTTN-209ENST00000525276 ZNF316A6NFI3 1004 aaPredicted RBP15.32■□□□□ 0.04
CTTN-209ENST00000525276 ERVV-2B6SEH9 535 aa15.32■□□□□ 0.04
CTTN-209ENST00000525276 RPS6KA4O75676 772 aa15.32■□□□□ 0.04
CTTN-209ENST00000525276 HSP90AB1P08238 724 aaKnown RBP15.32■□□□□ 0.04
CTTN-209ENST00000525276 FCHSD2O94868 740 aa15.31■□□□□ 0.04
CTTN-209ENST00000525276 DDR1Q08345 913 aa15.31■□□□□ 0.04
CTTN-209ENST00000525276 C1orf141Q5JVX7 400 aa15.31■□□□□ 0.04
CTTN-209ENST00000525276 C9orf131Q5VYM1 1079 aa15.31■□□□□ 0.04
CTTN-209ENST00000525276 RBM46Q8TBY0 533 aaKnown RBP15.31■□□□□ 0.04
CTTN-209ENST00000525276 DCAF5Q96JK2 942 aa15.31■□□□□ 0.04
CTTN-209ENST00000525276 KCPQ6ZWJ8 1503 aa15.31■□□□□ 0.04
CTTN-209ENST00000525276 RBM42Q9BTD8 480 aaKnown RBP15.3■□□□□ 0.04
CTTN-209ENST00000525276 CCDC87Q9NVE4 849 aa15.3■□□□□ 0.04
CTTN-209ENST00000525276 SRP68Q9UHB9 627 aaKnown RBP15.3■□□□□ 0.04
CTTN-209ENST00000525276 FKBP8Q14318 412 aa15.29■□□□□ 0.04
CTTN-209ENST00000525276 JMYQ8N9B5 988 aa15.29■□□□□ 0.04
CTTN-209ENST00000525276 RFC4P35249 363 aa15.28■□□□□ 0.04
CTTN-209ENST00000525276 COL13A1Q5TAT6 717 aaPredicted RBP15.28■□□□□ 0.04
CTTN-209ENST00000525276 KLRG1Q96E93 195 aa15.28■□□□□ 0.04
CTTN-209ENST00000525276 PARP3Q9Y6F1 533 aa15.28■□□□□ 0.04
CTTN-209ENST00000525276 USP42Q9H9J4 1324 aaKnown RBP15.27■□□□□ 0.04
CTTN-209ENST00000525276 U2AF1L5P0DN76 240 aaPredicted RBP15.27■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms