RNA–Protein interactions for RNA: ENST00000525201.5

TSPAN4-214, Transcript of tetraspanin 4, humanhuman

TSL 5 BASIC

Gene TSPAN4, Length 834 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-214ENST00000525201 HMOX1P09601 288 aa23.37■■□□□ 1.33
TSPAN4-214ENST00000525201 ATP6V1AP38606 617 aa23.37■■□□□ 1.33
TSPAN4-214ENST00000525201 ATG3Q9NT62 314 aa23.36■■□□□ 1.33
TSPAN4-214ENST00000525201 NUDCQ9Y266 331 aa23.36■■□□□ 1.33
TSPAN4-214ENST00000525201 COL24A1Q17RW2 1714 aa23.36■■□□□ 1.33
TSPAN4-214ENST00000525201 U2SURPO15042 1029 aaKnown RBP23.35■■□□□ 1.33
TSPAN4-214ENST00000525201 SSFA2P28290 1259 aa23.35■■□□□ 1.33
TSPAN4-214ENST00000525201 FHDC1Q9C0D6 1143 aaPredicted RBP23.35■■□□□ 1.33
TSPAN4-214ENST00000525201 COL23A1Q86Y22 540 aaPredicted RBP23.33■■□□□ 1.33
TSPAN4-214ENST00000525201 SCN11AQ9UI33 1791 aa23.32■■□□□ 1.32
TSPAN4-214ENST00000525201 SYT17Q9BSW7 474 aa23.32■■□□□ 1.32
TSPAN4-214ENST00000525201 RBM42Q9BTD8 480 aaKnown RBP23.32■■□□□ 1.32
TSPAN4-214ENST00000525201 GAS2L2Q8NHY3 880 aa23.31■■□□□ 1.32
TSPAN4-214ENST00000525201 MRC1P22897 1456 aa23.3■■□□□ 1.32
TSPAN4-214ENST00000525201 NFATC2IPQ8NCF5 419 aa23.3■■□□□ 1.32
TSPAN4-214ENST00000525201 LINC00116Q8NCU8 138 aa23.3■■□□□ 1.32
TSPAN4-214ENST00000525201 GNPATO15228 680 aa23.29■■□□□ 1.32
TSPAN4-214ENST00000525201 PPP2R1AP30153 589 aa23.29■■□□□ 1.32
TSPAN4-214ENST00000525201 UBR3Q6ZT12 1888 aa23.29■■□□□ 1.32
TSPAN4-214ENST00000525201 SLC52A2Q9HAB3 445 aa23.29■■□□□ 1.32
TSPAN4-214ENST00000525201 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP23.28■■□□□ 1.32
TSPAN4-214ENST00000525201 PHF14O94880 888 aa23.28■■□□□ 1.32
TSPAN4-214ENST00000525201 ITPK1Q13572 414 aa23.28■■□□□ 1.32
TSPAN4-214ENST00000525201 MTHFSDQ2M296 383 aaKnown RBP23.27■■□□□ 1.32
TSPAN4-214ENST00000525201 RTCBQ9Y3I0 505 aaKnown RBP23.27■■□□□ 1.32
TSPAN4-214ENST00000525201 CNTNAP4Q9C0A0 1308 aa23.27■■□□□ 1.32
TSPAN4-214ENST00000525201 RNMTO43148 476 aaKnown RBP23.26■■□□□ 1.31
TSPAN4-214ENST00000525201 ADRA2BP18089 450 aa23.26■■□□□ 1.31
TSPAN4-214ENST00000525201 RC3H1Q5TC82 1133 aaKnown RBP23.26■■□□□ 1.31
TSPAN4-214ENST00000525201 KLHL34Q8N239 644 aa23.26■■□□□ 1.31
TSPAN4-214ENST00000525201 CICQ96RK0 1608 aaPredicted RBP23.26■■□□□ 1.31
TSPAN4-214ENST00000525201 ADAMTS7Q9UKP4 1686 aa23.25■■□□□ 1.31
TSPAN4-214ENST00000525201 COL5A3P25940 1745 aaPredicted RBP23.25■■□□□ 1.31
TSPAN4-214ENST00000525201 GNAT3A8MTJ3 354 aa23.23■■□□□ 1.31
TSPAN4-214ENST00000525201 PTCD1O75127 700 aaKnown RBP23.23■■□□□ 1.31
TSPAN4-214ENST00000525201 MSL1Q68DK7 614 aa23.23■■□□□ 1.31
TSPAN4-214ENST00000525201 NEFMP07197 916 aa23.22■■□□□ 1.31
TSPAN4-214ENST00000525201 U2AF1L5P0DN76 240 aaPredicted RBP23.22■■□□□ 1.31
TSPAN4-214ENST00000525201 U2AF1Q01081 240 aaKnown RBP eCLIP23.22■■□□□ 1.31
TSPAN4-214ENST00000525201 TRAPPC3LQ5T215 181 aa23.22■■□□□ 1.31
TSPAN4-214ENST00000525201 PRKAR2BP31323 418 aa23.21■■□□□ 1.31
TSPAN4-214ENST00000525201 TEFQ10587 303 aa23.21■■□□□ 1.31
TSPAN4-214ENST00000525201 FCHSD2O94868 740 aa23.2■■□□□ 1.3
TSPAN4-214ENST00000525201 TTC5Q8N0Z6 440 aa23.2■■□□□ 1.3
TSPAN4-214ENST00000525201 LGR6Q9HBX8 967 aa23.2■■□□□ 1.3
TSPAN4-214ENST00000525201 VIRMAQ69YN4 1812 aaKnown RBP23.19■■□□□ 1.3
TSPAN4-214ENST00000525201 SLC4A9Q96Q91 983 aa23.19■■□□□ 1.3
TSPAN4-214ENST00000525201 RSPH6AQ9H0K4 717 aa23.19■■□□□ 1.3
TSPAN4-214ENST00000525201 RPS6KA4O75676 772 aa23.18■■□□□ 1.3
TSPAN4-214ENST00000525201 CD2APQ9Y5K6 639 aa23.18■■□□□ 1.3
TSPAN4-214ENST00000525201 YY1P25490 414 aa23.17■■□□□ 1.3
TSPAN4-214ENST00000525201 RFC4P35249 363 aa23.17■■□□□ 1.3
TSPAN4-214ENST00000525201 RALBP1Q15311 655 aa23.17■■□□□ 1.3
TSPAN4-214ENST00000525201 TJP1Q07157 1748 aa23.16■■□□□ 1.3
TSPAN4-214ENST00000525201 CRKLP46109 303 aaKnown RBP23.16■■□□□ 1.3
TSPAN4-214ENST00000525201 GPR162Q16538 588 aa23.16■■□□□ 1.3
TSPAN4-214ENST00000525201 AMIGO3Q86WK7 504 aa23.16■■□□□ 1.3
TSPAN4-214ENST00000525201 VSIG10Q8N0Z9 540 aa23.16■■□□□ 1.3
TSPAN4-214ENST00000525201 NLGN1Q8N2Q7 840 aa23.16■■□□□ 1.3
TSPAN4-214ENST00000525201 PNNQ9H307 717 aaKnown RBP23.16■■□□□ 1.3
TSPAN4-214ENST00000525201 RTF1Q92541 710 aaKnown RBP23.15■■□□□ 1.3
TSPAN4-214ENST00000525201 ZEB1P37275 1124 aaPredicted RBP23.14■■□□□ 1.29
TSPAN4-214ENST00000525201 KCPQ6ZWJ8 1503 aa23.13■■□□□ 1.29
TSPAN4-214ENST00000525201 CEMIPQ8WUJ3 1361 aa23.13■■□□□ 1.29
TSPAN4-214ENST00000525201 UBR2Q8IWV8 1755 aa23.12■■□□□ 1.29
TSPAN4-214ENST00000525201 ARHGEF1Q92888 912 aaKnown RBP23.12■■□□□ 1.29
TSPAN4-214ENST00000525201 CCDC87Q9NVE4 849 aa23.12■■□□□ 1.29
TSPAN4-214ENST00000525201 SLC39A6Q13433 755 aa23.11■■□□□ 1.29
TSPAN4-214ENST00000525201 TEX13AQ9BXU3 409 aaPredicted RBP23.11■■□□□ 1.29
TSPAN4-214ENST00000525201 HTATSF1O43719 755 aaKnown RBP23.1■■□□□ 1.29
TSPAN4-214ENST00000525201 STARD3NLO95772 234 aa23.1■■□□□ 1.29
TSPAN4-214ENST00000525201 PELP1Q8IZL8 1130 aaKnown RBP23.1■■□□□ 1.29
TSPAN4-214ENST00000525201 IL17REQ8NFR9 667 aa23.1■■□□□ 1.29
TSPAN4-214ENST00000525201 PHACTR3Q96KR7 559 aa23.1■■□□□ 1.29
TSPAN4-214ENST00000525201 C4AP0C0L4 1744 aa23.09■■□□□ 1.29
TSPAN4-214ENST00000525201 GRIN3BO60391 1043 aa23.09■■□□□ 1.29
TSPAN4-214ENST00000525201 MMP10P09238 476 aa23.09■■□□□ 1.29
TSPAN4-214ENST00000525201 ZNF790Q6PG37 636 aa23.09■■□□□ 1.29
TSPAN4-214ENST00000525201 SMIM5Q71RC9 77 aa23.09■■□□□ 1.29
TSPAN4-214ENST00000525201 DNAJC10Q8IXB1 793 aa23.09■■□□□ 1.29
TSPAN4-214ENST00000525201 NLGN2Q8NFZ4 835 aa23.09■■□□□ 1.29
TSPAN4-214ENST00000525201 DDX10Q13206 875 aaKnown RBP23.08■■□□□ 1.29
TSPAN4-214ENST00000525201 SIPA1L3O60292 1781 aaPredicted RBP23.08■■□□□ 1.29
TSPAN4-214ENST00000525201 ZPR1O75312 459 aa23.07■■□□□ 1.28
TSPAN4-214ENST00000525201 CYP19A1P11511 503 aaPredicted RBP23.07■■□□□ 1.28
TSPAN4-214ENST00000525201 GYS1P13807 737 aa23.07■■□□□ 1.28
TSPAN4-214ENST00000525201 FMNL2Q96PY5 1086 aa23.07■■□□□ 1.28
TSPAN4-214ENST00000525201 MYH14Q7Z406 1995 aaKnown RBP23.07■■□□□ 1.28
TSPAN4-214ENST00000525201 USP42Q9H9J4 1324 aaKnown RBP23.07■■□□□ 1.28
TSPAN4-214ENST00000525201 MAPK8IP3Q9UPT6 1336 aa23.07■■□□□ 1.28
TSPAN4-214ENST00000525201 HEG1Q9ULI3 1381 aa23.06■■□□□ 1.28
TSPAN4-214ENST00000525201 BTBD11A6QL63 1104 aa23.06■■□□□ 1.28
TSPAN4-214ENST00000525201 INTS5Q6P9B9 1019 aaKnown RBP23.06■■□□□ 1.28
TSPAN4-214ENST00000525201 PARP3Q9Y6F1 533 aa23.06■■□□□ 1.28
TSPAN4-214ENST00000525201 SOS1Q07889 1333 aaPredicted RBP23.05■■□□□ 1.28
TSPAN4-214ENST00000525201 MYBBP1AQ9BQG0 1328 aaKnown RBP23.05■■□□□ 1.28
TSPAN4-214ENST00000525201 COL15A1P39059 1388 aa23.04■■□□□ 1.28
TSPAN4-214ENST00000525201 NPM2Q86SE8 214 aaKnown RBP23.04■■□□□ 1.28
TSPAN4-214ENST00000525201 A0A087WZG4 1122 aa23.03■■□□□ 1.28
TSPAN4-214ENST00000525201 CHD4Q14839 1912 aa23.03■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms