RNA–Protein interactions for RNA: ENST00000525124.1

DEPDC1-205, Transcript of DEP domain containing 1, humanhuman

TSL 3

Gene DEPDC1, Length 582 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1-205ENST00000525124 CPSF1Q10570 1443 aaKnown RBP12.01□□□□□ -0.49
DEPDC1-205ENST00000525124 NFAT5O94916 1531 aa12.01□□□□□ -0.49
DEPDC1-205ENST00000525124 CASZ1Q86V15 1759 aa12□□□□□ -0.49
DEPDC1-205ENST00000525124 ARHGAP33O14559 1287 aa12□□□□□ -0.49
DEPDC1-205ENST00000525124 PLPP6Q8IY26 295 aa12□□□□□ -0.49
DEPDC1-205ENST00000525124 HS6ST3Q8IZP7 471 aa12□□□□□ -0.49
DEPDC1-205ENST00000525124 GPHNQ9NQX3 736 aaPredicted RBP12□□□□□ -0.49
DEPDC1-205ENST00000525124 TTC21AQ8NDW8 1320 aa12□□□□□ -0.49
DEPDC1-205ENST00000525124 FAM208AQ9UK61 1670 aaKnown RBP11.98□□□□□ -0.49
DEPDC1-205ENST00000525124 ROCK2O75116 1388 aaKnown RBP11.98□□□□□ -0.49
DEPDC1-205ENST00000525124 TTC21BQ7Z4L5 1316 aa11.98□□□□□ -0.49
DEPDC1-205ENST00000525124 WDR17Q8IZU2 1322 aa11.98□□□□□ -0.49
DEPDC1-205ENST00000525124 PLSCR1O15162 318 aa11.98□□□□□ -0.49
DEPDC1-205ENST00000525124 KCNH5Q8NCM2 988 aa11.98□□□□□ -0.49
DEPDC1-205ENST00000525124 CDCA7Q9BWT1 371 aaPredicted RBP11.98□□□□□ -0.49
DEPDC1-205ENST00000525124 NHSQ6T4R5 1651 aa11.97□□□□□ -0.49
DEPDC1-205ENST00000525124 NBPF14Q5TI25 921 aa11.97□□□□□ -0.49
DEPDC1-205ENST00000525124 ADGRD1Q6QNK2 874 aa11.97□□□□□ -0.49
DEPDC1-205ENST00000525124 ARHGEF25Q86VW2 580 aa11.97□□□□□ -0.49
DEPDC1-205ENST00000525124 USP31Q70CQ4 1352 aa11.96□□□□□ -0.49
DEPDC1-205ENST00000525124 DSG2Q14126 1118 aa11.96□□□□□ -0.49
DEPDC1-205ENST00000525124 DDB1Q16531 1140 aa11.95□□□□□ -0.5
DEPDC1-205ENST00000525124 SIN3AQ96ST3 1273 aa11.95□□□□□ -0.5
DEPDC1-205ENST00000525124 CD163L1Q9NR16 1453 aa11.95□□□□□ -0.5
DEPDC1-205ENST00000525124 KTN1Q86UP2 1357 aaKnown RBP11.94□□□□□ -0.5
DEPDC1-205ENST00000525124 CCDC7Q96M83 1385 aa11.94□□□□□ -0.5
DEPDC1-205ENST00000525124 DMRTA1Q5VZB9 504 aa11.94□□□□□ -0.5
DEPDC1-205ENST00000525124 TOM1L2Q6ZVM7 507 aa11.94□□□□□ -0.5
DEPDC1-205ENST00000525124 CARD10Q9BWT7 1032 aa11.94□□□□□ -0.5
DEPDC1-205ENST00000525124 QSER1Q2KHR3 1735 aa11.94□□□□□ -0.5
DEPDC1-205ENST00000525124 PSEN2P49810 448 aa11.93□□□□□ -0.5
DEPDC1-205ENST00000525124 PUS7Q96PZ0 661 aaKnown RBP11.93□□□□□ -0.5
DEPDC1-205ENST00000525124 TNS2Q63HR2 1409 aa11.93□□□□□ -0.5
DEPDC1-205ENST00000525124 BTAF1O14981 1849 aa11.93□□□□□ -0.5
DEPDC1-205ENST00000525124 EDC4Q6P2E9 1401 aaKnown RBP11.91□□□□□ -0.5
DEPDC1-205ENST00000525124 NINLQ9Y2I6 1382 aa11.91□□□□□ -0.5
DEPDC1-205ENST00000525124 PAPPAQ13219 1627 aa11.9□□□□□ -0.5
DEPDC1-205ENST00000525124 KAT6BQ8WYB5 2073 aa11.9□□□□□ -0.5
DEPDC1-205ENST00000525124 ZBTB7CA1YPR0 619 aa11.9□□□□□ -0.5
DEPDC1-205ENST00000525124 KCNQ2O43526 872 aa11.9□□□□□ -0.5
DEPDC1-205ENST00000525124 HRO43593 1189 aa11.9□□□□□ -0.5
DEPDC1-205ENST00000525124 COL24A1Q17RW2 1714 aa11.9□□□□□ -0.5
DEPDC1-205ENST00000525124 MARCH10Q8NA82 808 aaPredicted RBP11.9□□□□□ -0.5
DEPDC1-205ENST00000525124 SPON1Q9HCB6 807 aa11.9□□□□□ -0.5
DEPDC1-205ENST00000525124 TK2O00142 265 aa11.89□□□□□ -0.51
DEPDC1-205ENST00000525124 NEUROD1Q13562 356 aa11.89□□□□□ -0.51
DEPDC1-205ENST00000525124 NKX1-1Q15270 411 aaPredicted RBP11.89□□□□□ -0.51
DEPDC1-205ENST00000525124 HCSTQ9UBK5 93 aa11.89□□□□□ -0.51
DEPDC1-205ENST00000525124 CHD4Q14839 1912 aa11.89□□□□□ -0.51
DEPDC1-205ENST00000525124 RGPD2P0DJD1 1756 aa11.89□□□□□ -0.51
DEPDC1-205ENST00000525124 SHANK3Q9BYB0 1731 aa11.89□□□□□ -0.51
DEPDC1-205ENST00000525124 MYOM1P52179 1685 aa11.88□□□□□ -0.51
DEPDC1-205ENST00000525124 EXOC5O00471 708 aa11.88□□□□□ -0.51
DEPDC1-205ENST00000525124 TBC1D12O60347 775 aa11.88□□□□□ -0.51
DEPDC1-205ENST00000525124 LY75O60449 1722 aa11.87□□□□□ -0.51
DEPDC1-205ENST00000525124 CSB-PGBD3P0DP91 1061 aa11.87□□□□□ -0.51
DEPDC1-205ENST00000525124 PPP4R3BQ5MIZ7 849 aa11.87□□□□□ -0.51
DEPDC1-205ENST00000525124 CARD11Q9BXL7 1154 aa11.87□□□□□ -0.51
DEPDC1-205ENST00000525124 SLC24A1O60721 1099 aa11.86□□□□□ -0.51
DEPDC1-205ENST00000525124 HDGFL2Q7Z4V5 671 aaPredicted RBP11.86□□□□□ -0.51
DEPDC1-205ENST00000525124 ANO8Q9HCE9 1232 aaPredicted RBP11.86□□□□□ -0.51
DEPDC1-205ENST00000525124 PLA2G2EQ9NZK7 142 aa11.86□□□□□ -0.51
DEPDC1-205ENST00000525124 TUBGCP6Q96RT7 1819 aa11.86□□□□□ -0.51
DEPDC1-205ENST00000525124 A0A1W2PP64 1363 aa11.85□□□□□ -0.51
DEPDC1-205ENST00000525124 PTF1AQ7RTS3 328 aa11.85□□□□□ -0.51
DEPDC1-205ENST00000525124 TERF2IPQ9NYB0 399 aa11.85□□□□□ -0.51
DEPDC1-205ENST00000525124 KIF20BQ96Q89 1820 aa11.85□□□□□ -0.51
DEPDC1-205ENST00000525124 DOT1LQ8TEK3 1739 aa11.84□□□□□ -0.51
DEPDC1-205ENST00000525124 TXNRD1Q16881 649 aa11.84□□□□□ -0.51
DEPDC1-205ENST00000525124 SUGP2Q8IX01 1082 aaKnown RBP eCLIP11.84□□□□□ -0.51
DEPDC1-205ENST00000525124 OXER1Q8TDS5 423 aa11.84□□□□□ -0.51
DEPDC1-205ENST00000525124 PPP1R1BQ9UD71 204 aaPredicted RBP11.84□□□□□ -0.51
DEPDC1-205ENST00000525124 TONSLQ96HA7 1378 aa11.83□□□□□ -0.52
DEPDC1-205ENST00000525124 IL2RBP14784 551 aa11.83□□□□□ -0.52
DEPDC1-205ENST00000525124 NME9Q86XW9 330 aa11.83□□□□□ -0.52
DEPDC1-205ENST00000525124 SLC12A5Q9H2X9 1139 aa11.83□□□□□ -0.52
DEPDC1-205ENST00000525124 SLC15A2Q16348 729 aa11.82□□□□□ -0.52
DEPDC1-205ENST00000525124 CRISPLD2Q9H0B8 497 aa11.82□□□□□ -0.52
DEPDC1-205ENST00000525124 TMC1Q8TDI8 760 aa11.81□□□□□ -0.52
DEPDC1-205ENST00000525124 ANKRD24Q8TF21 1146 aa11.81□□□□□ -0.52
DEPDC1-205ENST00000525124 IP6K1Q92551 441 aa11.81□□□□□ -0.52
DEPDC1-205ENST00000525124 STK32BQ9NY57 414 aa11.81□□□□□ -0.52
DEPDC1-205ENST00000525124 TESK2Q96S53 571 aa11.8□□□□□ -0.52
DEPDC1-205ENST00000525124 KCNK17Q96T54 332 aa11.8□□□□□ -0.52
DEPDC1-205ENST00000525124 NLRP2Q9NX02 1062 aa11.8□□□□□ -0.52
DEPDC1-205ENST00000525124 TAF1LQ8IZX4 1826 aa11.79□□□□□ -0.52
DEPDC1-205ENST00000525124 MTFR1LQ9H019 292 aa11.79□□□□□ -0.52
DEPDC1-205ENST00000525124 RTL1A6NKG5 1358 aa11.79□□□□□ -0.52
DEPDC1-205ENST00000525124 ANKRD36BQ8N2N9 1353 aa11.79□□□□□ -0.52
DEPDC1-205ENST00000525124 MAP3K5Q99683 1374 aa11.79□□□□□ -0.52
DEPDC1-205ENST00000525124 ANKRD26Q9UPS8 1709 aa11.78□□□□□ -0.52
DEPDC1-205ENST00000525124 YY1P25490 414 aa11.78□□□□□ -0.52
DEPDC1-205ENST00000525124 PDGFDQ9GZP0 370 aaPredicted RBP11.78□□□□□ -0.52
DEPDC1-205ENST00000525124 ITGB4P16144 1822 aa11.78□□□□□ -0.52
DEPDC1-205ENST00000525124 KCTD12Q96CX2 325 aaKnown RBP11.77□□□□□ -0.53
DEPDC1-205ENST00000525124 MAP2P11137 1827 aaKnown RBP11.76□□□□□ -0.53
DEPDC1-205ENST00000525124 ST20-MTHFSA0A0A6YYL1 179 aa11.76□□□□□ -0.53
DEPDC1-205ENST00000525124 ZBTB7AO95365 584 aa11.76□□□□□ -0.53
DEPDC1-205ENST00000525124 SLC27A3Q5K4L6 730 aa11.76□□□□□ -0.53
DEPDC1-205ENST00000525124 ACSBG1Q96GR2 724 aa11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms