RNA–Protein interactions for RNA: ENST00000525078.1

USP47-204, Transcript of ubiquitin specific peptidase 47, humanhuman

TSL 1 (best)

Gene USP47, Length 978 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-204ENST00000525078 SLC27A5Q9Y2P5 690 aa7.66□□□□□ -1.18
USP47-204ENST00000525078 GOLGA8CPA6NN73 597 aa7.65□□□□□ -1.18
USP47-204ENST00000525078 ARID5AQ03989 594 aa7.65□□□□□ -1.18
USP47-204ENST00000525078 PDE3BQ13370 1112 aa7.65□□□□□ -1.18
USP47-204ENST00000525078 FKBP5Q13451 457 aaPredicted RBP7.65□□□□□ -1.18
USP47-204ENST00000525078 PUS10Q3MIT2 529 aaKnown RBP7.65□□□□□ -1.18
USP47-204ENST00000525078 MRPL50Q8N5N7 158 aaKnown RBP7.65□□□□□ -1.18
USP47-204ENST00000525078 ARMC2Q8NEN0 867 aa7.65□□□□□ -1.18
USP47-204ENST00000525078 PSMD1Q99460 953 aa7.65□□□□□ -1.18
USP47-204ENST00000525078 INPP5FQ9Y2H2 1132 aa7.65□□□□□ -1.18
USP47-204ENST00000525078 PTPROQ16827 1216 aa7.64□□□□□ -1.19
USP47-204ENST00000525078 MORN1Q5T089 497 aa7.64□□□□□ -1.19
USP47-204ENST00000525078 SPACA7Q96KW9 195 aa7.64□□□□□ -1.19
USP47-204ENST00000525078 USB1Q9BQ65 265 aaKnown RBP7.64□□□□□ -1.19
USP47-204ENST00000525078 METTL14Q9HCE5 456 aaKnown RBP7.64□□□□□ -1.19
USP47-204ENST00000525078 TBX22Q9Y458 520 aa7.64□□□□□ -1.19
USP47-204ENST00000525078 WEE1P30291 646 aa7.63□□□□□ -1.19
USP47-204ENST00000525078 ANAPC15P60006 121 aa7.63□□□□□ -1.19
USP47-204ENST00000525078 DAB2P98082 770 aa7.63□□□□□ -1.19
USP47-204ENST00000525078 NBPF14Q5TI25 921 aa7.63□□□□□ -1.19
USP47-204ENST00000525078 ZBTB33Q86T24 672 aa7.63□□□□□ -1.19
USP47-204ENST00000525078 DZIP3Q86Y13 1208 aaKnown RBP7.63□□□□□ -1.19
USP47-204ENST00000525078 ADAM32Q8TC27 787 aa7.63□□□□□ -1.19
USP47-204ENST00000525078 GPKOWQ92917 476 aaPredicted RBP eCLIP7.63□□□□□ -1.19
USP47-204ENST00000525078 GPATCH3Q96I76 525 aa7.63□□□□□ -1.19
USP47-204ENST00000525078 CCDC85AQ96PX6 553 aaPredicted RBP7.63□□□□□ -1.19
USP47-204ENST00000525078 ARHGAP9Q9BRR9 750 aa7.63□□□□□ -1.19
USP47-204ENST00000525078 SEPT9Q9UHD8 586 aaPredicted RBP7.63□□□□□ -1.19
USP47-204ENST00000525078 MPSTP25325 297 aa7.62□□□□□ -1.19
USP47-204ENST00000525078 EHHADHQ08426 723 aa7.62□□□□□ -1.19
USP47-204ENST00000525078 PTPRNQ16849 979 aa7.62□□□□□ -1.19
USP47-204ENST00000525078 PPP1R18Q6NYC8 613 aa7.62□□□□□ -1.19
USP47-204ENST00000525078 TSEN2Q8NCE0 465 aaKnown RBP7.62□□□□□ -1.19
USP47-204ENST00000525078 DMRTB1Q96MA1 342 aa7.62□□□□□ -1.19
USP47-204ENST00000525078 PURBQ96QR8 312 aaKnown RBP7.62□□□□□ -1.19
USP47-204ENST00000525078 CITED4Q96RK1 184 aa7.62□□□□□ -1.19
USP47-204ENST00000525078 GMLQ99445 158 aa7.62□□□□□ -1.19
USP47-204ENST00000525078 PRKD2Q9BZL6 878 aa7.62□□□□□ -1.19
USP47-204ENST00000525078 RNF19AQ9NV58 838 aa7.62□□□□□ -1.19
USP47-204ENST00000525078 PPME1Q9Y570 386 aa7.62□□□□□ -1.19
USP47-204ENST00000525078 STK10O94804 968 aaKnown RBP7.61□□□□□ -1.19
USP47-204ENST00000525078 RBL2Q08999 1139 aa7.61□□□□□ -1.19
USP47-204ENST00000525078 RNF19BQ6ZMZ0 732 aa7.61□□□□□ -1.19
USP47-204ENST00000525078 VPS37DQ86XT2 251 aa7.61□□□□□ -1.19
USP47-204ENST00000525078 ZNF526Q8TF50 670 aaPredicted RBP7.61□□□□□ -1.19
USP47-204ENST00000525078 COL26A1Q96A83 441 aa7.61□□□□□ -1.19
USP47-204ENST00000525078 VTI1AQ96AJ9 217 aa7.61□□□□□ -1.19
USP47-204ENST00000525078 OCSTAMPQ9BR26 566 aa7.61□□□□□ -1.19
USP47-204ENST00000525078 OSBPL2Q9H1P3 480 aa7.61□□□□□ -1.19
USP47-204ENST00000525078 NPR3P17342 541 aa7.6□□□□□ -1.19
USP47-204ENST00000525078 DSC3Q14574 896 aa7.6□□□□□ -1.19
USP47-204ENST00000525078 BMS1Q14692 1282 aaKnown RBP7.6□□□□□ -1.19
USP47-204ENST00000525078 TCEAL1Q15170 157 aa7.6□□□□□ -1.19
USP47-204ENST00000525078 RNF187Q5TA31 235 aaPredicted RBP7.6□□□□□ -1.19
USP47-204ENST00000525078 NLGN1Q8N2Q7 840 aa7.6□□□□□ -1.19
USP47-204ENST00000525078 GAS2L2Q8NHY3 880 aa7.6□□□□□ -1.19
USP47-204ENST00000525078 ZCRB1Q8TBF4 217 aaKnown RBP7.6□□□□□ -1.19
USP47-204ENST00000525078 KCNB2Q92953 911 aa7.6□□□□□ -1.19
USP47-204ENST00000525078 NBPF3Q9H094 633 aa7.6□□□□□ -1.19
USP47-204ENST00000525078 WWC3Q9ULE0 1092 aa7.6□□□□□ -1.19
USP47-204ENST00000525078 PCDHGA11Q9Y5H2 935 aa7.6□□□□□ -1.19
USP47-204ENST00000525078 JUNDP17535 347 aa7.59□□□□□ -1.19
USP47-204ENST00000525078 USP4Q13107 963 aa7.59□□□□□ -1.19
USP47-204ENST00000525078 CC2D2BQ6DHV5 1058 aa7.59□□□□□ -1.19
USP47-204ENST00000525078 BLOC1S3Q6QNY0 202 aa7.59□□□□□ -1.19
USP47-204ENST00000525078 SAMD7Q7Z3H4 446 aa7.59□□□□□ -1.19
USP47-204ENST00000525078 PLEKHD1A6NEE1 506 aa7.58□□□□□ -1.2
USP47-204ENST00000525078 RNF20Q5VTR2 975 aa7.58□□□□□ -1.2
USP47-204ENST00000525078 ZNF746Q6NUN9 644 aaPredicted RBP7.58□□□□□ -1.2
USP47-204ENST00000525078 ZNF654Q8IZM8 581 aa7.58□□□□□ -1.2
USP47-204ENST00000525078 CYLDQ9NQC7 956 aa7.58□□□□□ -1.2
USP47-204ENST00000525078 KLHL42Q9P2K6 505 aa7.58□□□□□ -1.2
USP47-204ENST00000525078 GIGYF1O75420 1035 aaPredicted RBP7.57□□□□□ -1.2
USP47-204ENST00000525078 ITGBL1O95965 494 aaPredicted RBP7.57□□□□□ -1.2
USP47-204ENST00000525078 CCDC181Q5TID7 509 aa7.57□□□□□ -1.2
USP47-204ENST00000525078 ALKBH2Q6NS38 261 aa7.57□□□□□ -1.2
USP47-204ENST00000525078 MRFAP1L1Q96HT8 127 aa7.57□□□□□ -1.2
USP47-204ENST00000525078 RABGEF1Q9UJ41 708 aa7.57□□□□□ -1.2
USP47-204ENST00000525078 NOP58Q9Y2X3 529 aaKnown RBP7.57□□□□□ -1.2
USP47-204ENST00000525078 EMILIN1Q9Y6C2 1016 aa7.57□□□□□ -1.2
USP47-204ENST00000525078 M0R2N6 131 aa7.56□□□□□ -1.2
USP47-204ENST00000525078 FOXO3O43524 673 aa7.56□□□□□ -1.2
USP47-204ENST00000525078 ACTN4O43707 911 aaKnown RBP7.56□□□□□ -1.2
USP47-204ENST00000525078 CCNYL3P0C7X3 344 aa7.56□□□□□ -1.2
USP47-204ENST00000525078 HSD3B2P26439 372 aa7.56□□□□□ -1.2
USP47-204ENST00000525078 NFE2L2Q16236 605 aa7.56□□□□□ -1.2
USP47-204ENST00000525078 FAM98CQ17RN3 349 aaKnown RBP7.56□□□□□ -1.2
USP47-204ENST00000525078 ZNF394Q53GI3 561 aa7.56□□□□□ -1.2
USP47-204ENST00000525078 ALG1LQ6GMV1 187 aa7.56□□□□□ -1.2
USP47-204ENST00000525078 JAZF1Q86VZ6 243 aa7.56□□□□□ -1.2
USP47-204ENST00000525078 SETDB2Q96T68 719 aa7.56□□□□□ -1.2
USP47-204ENST00000525078 CARD14Q9BXL6 1004 aa7.56□□□□□ -1.2
USP47-204ENST00000525078 MYH16Q9H6N6 1097 aa7.56□□□□□ -1.2
USP47-204ENST00000525078 CCDC87Q9NVE4 849 aa7.56□□□□□ -1.2
USP47-204ENST00000525078 DMGDHQ9UI17 866 aaKnown RBP7.56□□□□□ -1.2
USP47-204ENST00000525078 RIPOR2Q9Y4F9 1068 aa7.56□□□□□ -1.2
USP47-204ENST00000525078 PNMA6FA0A0J9YX94 578 aa7.55□□□□□ -1.2
USP47-204ENST00000525078 IGFBP4P22692 258 aa7.55□□□□□ -1.2
USP47-204ENST00000525078 EIF1AXP47813 144 aaKnown RBP7.55□□□□□ -1.2
USP47-204ENST00000525078 BRICD5Q6PL45 260 aa7.55□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms