RNA–Protein interactions for RNA: ENST00000524851.5

RPS3-203, Transcript of ribosomal protein S3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPS3, Length 866 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS3-203ENST00000524851 CD2APQ9Y5K6 639 aa13.22□□□□□ -0.29
RPS3-203ENST00000524851 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.2□□□□□ -0.3
RPS3-203ENST00000524851 GRIN3BO60391 1043 aa13.2□□□□□ -0.3
RPS3-203ENST00000524851 MSL1Q68DK7 614 aa13.2□□□□□ -0.3
RPS3-203ENST00000524851 NLGN2Q8NFZ4 835 aa13.2□□□□□ -0.3
RPS3-203ENST00000524851 ZNF831Q5JPB2 1677 aa13.2□□□□□ -0.3
RPS3-203ENST00000524851 KDM6AO15550 1401 aaPredicted RBP13.2□□□□□ -0.3
RPS3-203ENST00000524851 AMER1Q5JTC6 1135 aaPredicted RBP13.19□□□□□ -0.3
RPS3-203ENST00000524851 ZNF530Q6P9A1 599 aaPredicted RBP13.19□□□□□ -0.3
RPS3-203ENST00000524851 LINC00116Q8NCU8 138 aa13.19□□□□□ -0.3
RPS3-203ENST00000524851 ATG3Q9NT62 314 aa13.19□□□□□ -0.3
RPS3-203ENST00000524851 ASAP1Q9ULH1 1129 aa13.19□□□□□ -0.3
RPS3-203ENST00000524851 GNPATO15228 680 aa13.18□□□□□ -0.3
RPS3-203ENST00000524851 PHF14O94880 888 aa13.18□□□□□ -0.3
RPS3-203ENST00000524851 ATP6V1AP38606 617 aa13.18□□□□□ -0.3
RPS3-203ENST00000524851 ITPK1Q13572 414 aa13.18□□□□□ -0.3
RPS3-203ENST00000524851 C1orf141Q5JVX7 400 aa13.18□□□□□ -0.3
RPS3-203ENST00000524851 MAP2P11137 1827 aaKnown RBP13.18□□□□□ -0.3
RPS3-203ENST00000524851 CNTNAP4Q9C0A0 1308 aa13.17□□□□□ -0.3
RPS3-203ENST00000524851 PELP1Q8IZL8 1130 aaKnown RBP13.17□□□□□ -0.3
RPS3-203ENST00000524851 ITGB4P16144 1822 aa13.17□□□□□ -0.3
RPS3-203ENST00000524851 TAF1LQ8IZX4 1826 aa13.17□□□□□ -0.3
RPS3-203ENST00000524851 NPC1L1Q9UHC9 1359 aa13.17□□□□□ -0.3
RPS3-203ENST00000524851 IL13P35225 146 aa13.16□□□□□ -0.3
RPS3-203ENST00000524851 AMIGO3Q86WK7 504 aa13.16□□□□□ -0.3
RPS3-203ENST00000524851 AEBP1Q8IUX7 1158 aa13.16□□□□□ -0.3
RPS3-203ENST00000524851 CICQ96RK0 1608 aaPredicted RBP13.15□□□□□ -0.3
RPS3-203ENST00000524851 ZNF316A6NFI3 1004 aaPredicted RBP13.15□□□□□ -0.3
RPS3-203ENST00000524851 MTHFSP49914 203 aa13.15□□□□□ -0.3
RPS3-203ENST00000524851 CABP4P57796 275 aa13.15□□□□□ -0.3
RPS3-203ENST00000524851 RC3H1Q5TC82 1133 aaKnown RBP13.15□□□□□ -0.3
RPS3-203ENST00000524851 SULT6B1Q6IMI4 303 aa13.15□□□□□ -0.3
RPS3-203ENST00000524851 RTCBQ9Y3I0 505 aaKnown RBP13.15□□□□□ -0.3
RPS3-203ENST00000524851 MRC1P22897 1456 aa13.15□□□□□ -0.3
RPS3-203ENST00000524851 UBR3Q6ZT12 1888 aa13.14□□□□□ -0.31
RPS3-203ENST00000524851 GIGYF1O75420 1035 aaPredicted RBP13.14□□□□□ -0.31
RPS3-203ENST00000524851 YBX3P16989 372 aaKnown RBP eCLIP13.14□□□□□ -0.316e-77■□□□□ 9.7
RPS3-203ENST00000524851 AKAP4Q5JQC9 854 aa13.13□□□□□ -0.31
RPS3-203ENST00000524851 TRAPPC3LQ5T215 181 aa13.12□□□□□ -0.31
RPS3-203ENST00000524851 NLGN1Q8N2Q7 840 aa13.12□□□□□ -0.31
RPS3-203ENST00000524851 CNKSR2Q8WXI2 1034 aa13.12□□□□□ -0.31
RPS3-203ENST00000524851 RBM42Q9BTD8 480 aaKnown RBP13.12□□□□□ -0.31
RPS3-203ENST00000524851 C10orf71Q711Q0 1435 aa13.12□□□□□ -0.31
RPS3-203ENST00000524851 KAT6BQ8WYB5 2073 aa13.11□□□□□ -0.31
RPS3-203ENST00000524851 PER1O15534 1290 aaPredicted RBP13.11□□□□□ -0.31
RPS3-203ENST00000524851 RPS6KA4O75676 772 aa13.11□□□□□ -0.31
RPS3-203ENST00000524851 MMP10P09238 476 aa13.11□□□□□ -0.31
RPS3-203ENST00000524851 SLC4A9Q96Q91 983 aa13.11□□□□□ -0.31
RPS3-203ENST00000524851 ADCY9O60503 1353 aa13.1□□□□□ -0.31
RPS3-203ENST00000524851 DIAPH1O60610 1272 aaKnown RBP13.1□□□□□ -0.31
RPS3-203ENST00000524851 COL5A3P25940 1745 aaPredicted RBP13.1□□□□□ -0.31
RPS3-203ENST00000524851 PXDNLA1KZ92 1463 aa13.1□□□□□ -0.31
RPS3-203ENST00000524851 RFC4P35249 363 aa13.09□□□□□ -0.31
RPS3-203ENST00000524851 DDX10Q13206 875 aaKnown RBP13.09□□□□□ -0.31
RPS3-203ENST00000524851 SLC52A2Q9HAB3 445 aa13.09□□□□□ -0.31
RPS3-203ENST00000524851 COL3A1P02461 1466 aaPredicted RBP13.09□□□□□ -0.31
RPS3-203ENST00000524851 ATP10DQ9P241 1426 aa13.08□□□□□ -0.32
RPS3-203ENST00000524851 TGFB2P61812 414 aa13.08□□□□□ -0.32
RPS3-203ENST00000524851 SMIM5Q71RC9 77 aa13.08□□□□□ -0.32
RPS3-203ENST00000524851 NFATC2IPQ8NCF5 419 aa13.08□□□□□ -0.32
RPS3-203ENST00000524851 PTCD1O75127 700 aaKnown RBP13.07□□□□□ -0.32
RPS3-203ENST00000524851 GYS1P13807 737 aa13.07□□□□□ -0.32
RPS3-203ENST00000524851 CRKLP46109 303 aaKnown RBP13.07□□□□□ -0.32
RPS3-203ENST00000524851 ARHGEF1Q92888 912 aaKnown RBP13.07□□□□□ -0.32
RPS3-203ENST00000524851 CCDC87Q9NVE4 849 aa13.07□□□□□ -0.32
RPS3-203ENST00000524851 ADAMTS7Q9UKP4 1686 aa13.07□□□□□ -0.32
RPS3-203ENST00000524851 USP42Q9H9J4 1324 aaKnown RBP13.07□□□□□ -0.32
RPS3-203ENST00000524851 C4AP0C0L4 1744 aa13.06□□□□□ -0.32
RPS3-203ENST00000524851 CC2D1BQ5T0F9 858 aaKnown RBP13.06□□□□□ -0.32
RPS3-203ENST00000524851 PARP3Q9Y6F1 533 aa13.06□□□□□ -0.32
RPS3-203ENST00000524851 TJP1Q07157 1748 aa13.05□□□□□ -0.32
RPS3-203ENST00000524851 KCPQ6ZWJ8 1503 aa13.05□□□□□ -0.32
RPS3-203ENST00000524851 RNMTO43148 476 aaKnown RBP13.05□□□□□ -0.32
RPS3-203ENST00000524851 HMOX1P09601 288 aa13.05□□□□□ -0.32
RPS3-203ENST00000524851 VSIG10Q8N0Z9 540 aa13.05□□□□□ -0.32
RPS3-203ENST00000524851 GAS2L2Q8NHY3 880 aa13.05□□□□□ -0.32
RPS3-203ENST00000524851 MTHFSDQ2M296 383 aaKnown RBP13.04□□□□□ -0.32
RPS3-203ENST00000524851 SOS1Q07889 1333 aaPredicted RBP13.04□□□□□ -0.32
RPS3-203ENST00000524851 SCN11AQ9UI33 1791 aa13.03□□□□□ -0.32
RPS3-203ENST00000524851 CFAP53Q96M91 514 aa13.03□□□□□ -0.32
RPS3-203ENST00000524851 KIF13BQ9NQT8 1826 aa13.02□□□□□ -0.32
RPS3-203ENST00000524851 INTS5Q6P9B9 1019 aaKnown RBP13.02□□□□□ -0.33
RPS3-203ENST00000524851 DNAJC10Q8IXB1 793 aa13.02□□□□□ -0.33
RPS3-203ENST00000524851 TTC5Q8N0Z6 440 aa13.02□□□□□ -0.33
RPS3-203ENST00000524851 GPBP1L1Q9HC44 474 aaPredicted RBP13.02□□□□□ -0.33
RPS3-203ENST00000524851 COL15A1P39059 1388 aa13.02□□□□□ -0.33
RPS3-203ENST00000524851 CYP19A1P11511 503 aaPredicted RBP13.01□□□□□ -0.33
RPS3-203ENST00000524851 CNGB1Q14028 1251 aaPredicted RBP13.01□□□□□ -0.33
RPS3-203ENST00000524851 LGR6Q9HBX8 967 aa13.01□□□□□ -0.33
RPS3-203ENST00000524851 KIAA1551Q9HCM1 1747 aa13.01□□□□□ -0.33
RPS3-203ENST00000524851 U2SURPO15042 1029 aaKnown RBP13□□□□□ -0.33
RPS3-203ENST00000524851 ZPR1O75312 459 aa13□□□□□ -0.33
RPS3-203ENST00000524851 FKBP8Q14318 412 aa13□□□□□ -0.33
RPS3-203ENST00000524851 CEMIPQ8WUJ3 1361 aa12.99□□□□□ -0.33
RPS3-203ENST00000524851 GNAT3A8MTJ3 354 aa12.99□□□□□ -0.33
RPS3-203ENST00000524851 STARD3NLO95772 234 aa12.99□□□□□ -0.33
RPS3-203ENST00000524851 DPEP1P16444 411 aa12.99□□□□□ -0.33
RPS3-203ENST00000524851 DDR1Q08345 913 aa12.99□□□□□ -0.33
RPS3-203ENST00000524851 TEFQ10587 303 aa12.99□□□□□ -0.33
RPS3-203ENST00000524851 SRP68Q9UHB9 627 aaKnown RBP12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 9.4 ms