RNA–Protein interactions for RNA: ENST00000524797.1

TRAPPC4-204, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 1,924 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-204ENST00000524797 ARXQ96QS3 562 aa15.07■□□□□ 0
TRAPPC4-204ENST00000524797 CABP4P57796 275 aa15.06■□□□□ 0
TRAPPC4-204ENST00000524797 ITPK1Q13572 414 aa15.06■□□□□ 0
TRAPPC4-204ENST00000524797 AKAP4Q5JQC9 854 aa15.06■□□□□ 0
TRAPPC4-204ENST00000524797 MSH5O43196 834 aa15.05■□□□□ 0
TRAPPC4-204ENST00000524797 AK7Q96M32 723 aa15.05■□□□□ 0
TRAPPC4-204ENST00000524797 FHDC1Q9C0D6 1143 aaPredicted RBP15.05■□□□□ 0
TRAPPC4-204ENST00000524797 CICQ96RK0 1608 aaPredicted RBP15.05■□□□□ -0
TRAPPC4-204ENST00000524797 TJP1Q07157 1748 aa15.05■□□□□ -0
TRAPPC4-204ENST00000524797 ATP6V1AP38606 617 aa15.05■□□□□ -0
TRAPPC4-204ENST00000524797 FLAD1Q8NFF5 587 aa15.05■□□□□ -0
TRAPPC4-204ENST00000524797 MRC1P22897 1456 aa15.05■□□□□ -0
TRAPPC4-204ENST00000524797 POLD1P28340 1107 aa15.04■□□□□ -0
TRAPPC4-204ENST00000524797 PPP2R1AP30153 589 aa15.04■□□□□ -0
TRAPPC4-204ENST00000524797 MAP3K5Q99683 1374 aa15.04■□□□□ -0
TRAPPC4-204ENST00000524797 U2SURPO15042 1029 aaKnown RBP15.04■□□□□ -0
TRAPPC4-204ENST00000524797 MTHFSDQ2M296 383 aaKnown RBP15.04■□□□□ -0
TRAPPC4-204ENST00000524797 AMIGO3Q86WK7 504 aa15.04■□□□□ -0
TRAPPC4-204ENST00000524797 CFAP53Q96M91 514 aa15.04■□□□□ -0
TRAPPC4-204ENST00000524797 SLC4A9Q96Q91 983 aa15.04■□□□□ -0
TRAPPC4-204ENST00000524797 SYT17Q9BSW7 474 aa15.03■□□□□ -0
TRAPPC4-204ENST00000524797 RBM42Q9BTD8 480 aaKnown RBP15.03■□□□□ -0
TRAPPC4-204ENST00000524797 MYH14Q7Z406 1995 aaKnown RBP15.03■□□□□ -0
TRAPPC4-204ENST00000524797 NFATC2IPQ8NCF5 419 aa15.02■□□□□ -0
TRAPPC4-204ENST00000524797 RNMTO43148 476 aaKnown RBP15.02□□□□□ -0.01
TRAPPC4-204ENST00000524797 SMIM5Q71RC9 77 aa15.02□□□□□ -0.01
TRAPPC4-204ENST00000524797 LGR6Q9HBX8 967 aa15.02□□□□□ -0.01
TRAPPC4-204ENST00000524797 SIPA1L3O60292 1781 aaPredicted RBP15.02□□□□□ -0.01
TRAPPC4-204ENST00000524797 MSL1Q68DK7 614 aa15.01□□□□□ -0.01
TRAPPC4-204ENST00000524797 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP15□□□□□ -0.01
TRAPPC4-204ENST00000524797 DCAF8L1A6NGE4 600 aa15□□□□□ -0.01
TRAPPC4-204ENST00000524797 PHF14O94880 888 aa15□□□□□ -0.01
TRAPPC4-204ENST00000524797 SSFA2P28290 1259 aa15□□□□□ -0.01
TRAPPC4-204ENST00000524797 SLC52A2Q9HAB3 445 aa15□□□□□ -0.01
TRAPPC4-204ENST00000524797 UBR2Q8IWV8 1755 aa15□□□□□ -0.01
TRAPPC4-204ENST00000524797 GNPATO15228 680 aa15□□□□□ -0.01
TRAPPC4-204ENST00000524797 C4AP0C0L4 1744 aa15□□□□□ -0.01
TRAPPC4-204ENST00000524797 CNTNAP4Q9C0A0 1308 aa14.98□□□□□ -0.01
TRAPPC4-204ENST00000524797 RC3H1Q5TC82 1133 aaKnown RBP14.98□□□□□ -0.01
TRAPPC4-204ENST00000524797 PELP1Q8IZL8 1130 aaKnown RBP14.98□□□□□ -0.01
TRAPPC4-204ENST00000524797 RSPH6AQ9H0K4 717 aa14.98□□□□□ -0.01
TRAPPC4-204ENST00000524797 KCPQ6ZWJ8 1503 aa14.98□□□□□ -0.01
TRAPPC4-204ENST00000524797 PTCD1O75127 700 aaKnown RBP14.98□□□□□ -0.01
TRAPPC4-204ENST00000524797 KLHL34Q8N239 644 aa14.98□□□□□ -0.01
TRAPPC4-204ENST00000524797 GAS2L2Q8NHY3 880 aa14.98□□□□□ -0.01
TRAPPC4-204ENST00000524797 NUDCQ9Y266 331 aa14.98□□□□□ -0.01
TRAPPC4-204ENST00000524797 PRKAR2BP31323 418 aa14.96□□□□□ -0.01
TRAPPC4-204ENST00000524797 CHD4Q14839 1912 aa14.96□□□□□ -0.01
TRAPPC4-204ENST00000524797 RTCBQ9Y3I0 505 aaKnown RBP14.96□□□□□ -0.02
TRAPPC4-204ENST00000524797 U2AF1L5P0DN76 240 aaPredicted RBP14.95□□□□□ -0.02
TRAPPC4-204ENST00000524797 U2AF1Q01081 240 aaKnown RBP eCLIP14.95□□□□□ -0.02
TRAPPC4-204ENST00000524797 SLC39A6Q13433 755 aa14.95□□□□□ -0.02
TRAPPC4-204ENST00000524797 PHACTR3Q96KR7 559 aa14.95□□□□□ -0.02
TRAPPC4-204ENST00000524797 GNAT3A8MTJ3 354 aa14.94□□□□□ -0.02
TRAPPC4-204ENST00000524797 RPS6KA4O75676 772 aa14.94□□□□□ -0.02
TRAPPC4-204ENST00000524797 NLGN2Q8NFZ4 835 aa14.94□□□□□ -0.02
TRAPPC4-204ENST00000524797 DLG5Q8TDM6 1919 aa14.94□□□□□ -0.02
TRAPPC4-204ENST00000524797 ADRA2BP18089 450 aa14.94□□□□□ -0.02
TRAPPC4-204ENST00000524797 TRAPPC3LQ5T215 181 aa14.94□□□□□ -0.02
TRAPPC4-204ENST00000524797 IL17REQ8NFR9 667 aa14.94□□□□□ -0.02
TRAPPC4-204ENST00000524797 CRKLP46109 303 aaKnown RBP14.93□□□□□ -0.02
TRAPPC4-204ENST00000524797 KIF13BQ9NQT8 1826 aa14.92□□□□□ -0.02
TRAPPC4-204ENST00000524797 FCHSD2O94868 740 aa14.92□□□□□ -0.02
TRAPPC4-204ENST00000524797 DNAJC10Q8IXB1 793 aa14.92□□□□□ -0.02
TRAPPC4-204ENST00000524797 ARHGEF1Q92888 912 aaKnown RBP14.92□□□□□ -0.02
TRAPPC4-204ENST00000524797 CEMIPQ8WUJ3 1361 aa14.91□□□□□ -0.02
TRAPPC4-204ENST00000524797 TEFQ10587 303 aa14.91□□□□□ -0.02
TRAPPC4-204ENST00000524797 DDX10Q13206 875 aaKnown RBP14.91□□□□□ -0.02
TRAPPC4-204ENST00000524797 INTS5Q6P9B9 1019 aaKnown RBP14.91□□□□□ -0.02
TRAPPC4-204ENST00000524797 YY1P25490 414 aa14.9□□□□□ -0.02
TRAPPC4-204ENST00000524797 CD2APQ9Y5K6 639 aa14.9□□□□□ -0.02
TRAPPC4-204ENST00000524797 CCDC87Q9NVE4 849 aa14.9□□□□□ -0.02
TRAPPC4-204ENST00000524797 KIAA1551Q9HCM1 1747 aa14.89□□□□□ -0.03
TRAPPC4-204ENST00000524797 CYP19A1P11511 503 aaPredicted RBP14.89□□□□□ -0.03
TRAPPC4-204ENST00000524797 RFC4P35249 363 aa14.89□□□□□ -0.03
TRAPPC4-204ENST00000524797 RALBP1Q15311 655 aa14.89□□□□□ -0.03
TRAPPC4-204ENST00000524797 GPR162Q16538 588 aa14.89□□□□□ -0.03
TRAPPC4-204ENST00000524797 VSIG10Q8N0Z9 540 aa14.89□□□□□ -0.03
TRAPPC4-204ENST00000524797 GYS1P13807 737 aa14.88□□□□□ -0.03
TRAPPC4-204ENST00000524797 TTC5Q8N0Z6 440 aa14.88□□□□□ -0.03
TRAPPC4-204ENST00000524797 MMP10P09238 476 aa14.88□□□□□ -0.03
TRAPPC4-204ENST00000524797 NLGN1Q8N2Q7 840 aa14.88□□□□□ -0.03
TRAPPC4-204ENST00000524797 SOS1Q07889 1333 aaPredicted RBP14.88□□□□□ -0.03
TRAPPC4-204ENST00000524797 N4BP2Q86UW6 1770 aaPredicted RBP14.87□□□□□ -0.03
TRAPPC4-204ENST00000524797 ZNF790Q6PG37 636 aa14.86□□□□□ -0.03
TRAPPC4-204ENST00000524797 USP42Q9H9J4 1324 aaKnown RBP14.86□□□□□ -0.03
TRAPPC4-204ENST00000524797 SRP68Q9UHB9 627 aaKnown RBP14.86□□□□□ -0.03
TRAPPC4-204ENST00000524797 HEG1Q9ULI3 1381 aa14.86□□□□□ -0.03
TRAPPC4-204ENST00000524797 ZNF496Q96IT1 587 aaPredicted RBP14.86□□□□□ -0.03
TRAPPC4-204ENST00000524797 HTATSF1O43719 755 aaKnown RBP14.85□□□□□ -0.03
TRAPPC4-204ENST00000524797 YBX3P16989 372 aaKnown RBP eCLIP14.85□□□□□ -0.03
TRAPPC4-204ENST00000524797 MCM10Q7L590 875 aa14.85□□□□□ -0.03
TRAPPC4-204ENST00000524797 RTF1Q92541 710 aaKnown RBP14.85□□□□□ -0.03
TRAPPC4-204ENST00000524797 ZBTB1Q9Y2K1 713 aa14.85□□□□□ -0.03
TRAPPC4-204ENST00000524797 C10orf71Q711Q0 1435 aa14.85□□□□□ -0.03
TRAPPC4-204ENST00000524797 COL15A1P39059 1388 aa14.84□□□□□ -0.03
TRAPPC4-204ENST00000524797 KDM3BQ7LBC6 1761 aa14.84□□□□□ -0.03
TRAPPC4-204ENST00000524797 BTBD11A6QL63 1104 aa14.84□□□□□ -0.03
TRAPPC4-204ENST00000524797 KCNQ3O43525 872 aa14.84□□□□□ -0.03
TRAPPC4-204ENST00000524797 PLEKHF1Q96S99 279 aa14.84□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms