RNA–Protein interactions for RNA: ENST00000524478.1

MMP3-203, Transcript of matrix metallopeptidase 3, humanhuman

TSL 4

Gene MMP3, Length 559 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MMP3-203ENST00000524478 ITPK1Q13572 414 aa13.35□□□□□ -0.27
MMP3-203ENST00000524478 DNAJC5GQ8N7S2 189 aa13.35□□□□□ -0.27
MMP3-203ENST00000524478 SBF1O95248 1867 aa13.35□□□□□ -0.27
MMP3-203ENST00000524478 KIF24Q5T7B8 1368 aa13.34□□□□□ -0.27
MMP3-203ENST00000524478 ST20-MTHFSA0A0A6YYL1 179 aa13.34□□□□□ -0.27
MMP3-203ENST00000524478 APLP1P51693 650 aa13.34□□□□□ -0.27
MMP3-203ENST00000524478 ADAMTS7Q9UKP4 1686 aa13.34□□□□□ -0.27
MMP3-203ENST00000524478 LOC102724428A0A0B4J2F2 783 aa13.33□□□□□ -0.28
MMP3-203ENST00000524478 GNPATO15228 680 aa13.33□□□□□ -0.28
MMP3-203ENST00000524478 MMP10P09238 476 aa13.33□□□□□ -0.28
MMP3-203ENST00000524478 SIK1P57059 783 aa13.33□□□□□ -0.28
MMP3-203ENST00000524478 SMARCC1Q92922 1105 aaPredicted RBP13.33□□□□□ -0.28
MMP3-203ENST00000524478 NMRK2Q9NPI5 230 aa13.33□□□□□ -0.28
MMP3-203ENST00000524478 EMILIN1Q9Y6C2 1016 aa13.33□□□□□ -0.28
MMP3-203ENST00000524478 TJP1Q07157 1748 aa13.33□□□□□ -0.28
MMP3-203ENST00000524478 NKX1-1Q15270 411 aaPredicted RBP13.32□□□□□ -0.28
MMP3-203ENST00000524478 CLSPNQ9HAW4 1339 aa13.32□□□□□ -0.28
MMP3-203ENST00000524478 KCPQ6ZWJ8 1503 aa13.31□□□□□ -0.28
MMP3-203ENST00000524478 ASAP1Q9ULH1 1129 aa13.31□□□□□ -0.28
MMP3-203ENST00000524478 TONSLQ96HA7 1378 aa13.31□□□□□ -0.28
MMP3-203ENST00000524478 TIAM2Q8IVF5 1701 aa13.3□□□□□ -0.28
MMP3-203ENST00000524478 TOMM70O94826 608 aa13.3□□□□□ -0.28
MMP3-203ENST00000524478 HTRA3P83110 453 aa13.3□□□□□ -0.28
MMP3-203ENST00000524478 DLEC1Q9Y238 1755 aa13.3□□□□□ -0.28
MMP3-203ENST00000524478 SLC4A9Q96Q91 983 aa13.29□□□□□ -0.28
MMP3-203ENST00000524478 A0A0G2JLW4 131 aa13.28□□□□□ -0.28
MMP3-203ENST00000524478 BCS1LQ9Y276 419 aa13.28□□□□□ -0.28
MMP3-203ENST00000524478 KDM6AO15550 1401 aaPredicted RBP13.28□□□□□ -0.28
MMP3-203ENST00000524478 AFDNP55196 1824 aaKnown RBP13.27□□□□□ -0.28
MMP3-203ENST00000524478 DPEP1P16444 411 aa13.27□□□□□ -0.29
MMP3-203ENST00000524478 HMGB2P26583 209 aaKnown RBP13.27□□□□□ -0.29
MMP3-203ENST00000524478 ATG3Q9NT62 314 aa13.27□□□□□ -0.29
MMP3-203ENST00000524478 TMOD3Q9NYL9 352 aa13.27□□□□□ -0.29
MMP3-203ENST00000524478 PLEKHG2Q9H7P9 1386 aa13.27□□□□□ -0.29
MMP3-203ENST00000524478 VIRMAQ69YN4 1812 aaKnown RBP13.27□□□□□ -0.29
MMP3-203ENST00000524478 ATP6V1AP38606 617 aa13.26□□□□□ -0.29
MMP3-203ENST00000524478 COL13A1Q5TAT6 717 aaPredicted RBP13.26□□□□□ -0.29
MMP3-203ENST00000524478 PHKG2P15735 406 aa13.25□□□□□ -0.29
MMP3-203ENST00000524478 KCNA3P22001 575 aa13.25□□□□□ -0.29
MMP3-203ENST00000524478 TGFB2P61812 414 aa13.25□□□□□ -0.29
MMP3-203ENST00000524478 JMYQ8N9B5 988 aa13.25□□□□□ -0.29
MMP3-203ENST00000524478 RBM46Q8TBY0 533 aaKnown RBP13.25□□□□□ -0.29
MMP3-203ENST00000524478 KLRG1Q96E93 195 aa13.25□□□□□ -0.29
MMP3-203ENST00000524478 EYA1Q99502 592 aa13.25□□□□□ -0.29
MMP3-203ENST00000524478 CARD14Q9BXL6 1004 aa13.25□□□□□ -0.29
MMP3-203ENST00000524478 CCDC88AQ3V6T2 1871 aa13.25□□□□□ -0.29
MMP3-203ENST00000524478 SCN11AQ9UI33 1791 aa13.25□□□□□ -0.29
MMP3-203ENST00000524478 NRXN2Q9P2S2 1712 aa13.25□□□□□ -0.29
MMP3-203ENST00000524478 CNTNAP4Q9C0A0 1308 aa13.24□□□□□ -0.29
MMP3-203ENST00000524478 GYS1P13807 737 aa13.24□□□□□ -0.29
MMP3-203ENST00000524478 C9orf131Q5VYM1 1079 aa13.24□□□□□ -0.29
MMP3-203ENST00000524478 SPG7Q9UQ90 795 aa13.24□□□□□ -0.29
MMP3-203ENST00000524478 HOXD11P31277 338 aaPredicted RBP13.23□□□□□ -0.29
MMP3-203ENST00000524478 ARHGAP27Q6ZUM4 889 aa13.23□□□□□ -0.29
MMP3-203ENST00000524478 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.23□□□□□ -0.29
MMP3-203ENST00000524478 WASHC2AQ641Q2 1341 aa13.22□□□□□ -0.29
MMP3-203ENST00000524478 FCHSD2O94868 740 aa13.22□□□□□ -0.29
MMP3-203ENST00000524478 ARHGEF1Q92888 912 aaKnown RBP13.22□□□□□ -0.29
MMP3-203ENST00000524478 DCAF5Q96JK2 942 aa13.22□□□□□ -0.29
MMP3-203ENST00000524478 TMF1P82094 1093 aa13.21□□□□□ -0.29
MMP3-203ENST00000524478 DDR1Q08345 913 aa13.21□□□□□ -0.29
MMP3-203ENST00000524478 IFNL2Q8IZJ0 200 aa13.21□□□□□ -0.29
MMP3-203ENST00000524478 CCDC87Q9NVE4 849 aa13.21□□□□□ -0.29
MMP3-203ENST00000524478 RTCBQ9Y3I0 505 aaKnown RBP13.21□□□□□ -0.29
MMP3-203ENST00000524478 COL11A2P13942 1736 aaPredicted RBP13.2□□□□□ -0.3
MMP3-203ENST00000524478 PPM1GO15355 546 aaPredicted RBP13.2□□□□□ -0.3
MMP3-203ENST00000524478 ANKRD31Q8N7Z5 1873 aa13.19□□□□□ -0.3
MMP3-203ENST00000524478 CAPN15O75808 1086 aa13.19□□□□□ -0.3
MMP3-203ENST00000524478 FSTL1Q12841 308 aa13.19□□□□□ -0.3
MMP3-203ENST00000524478 EIF4A2Q14240 407 aaKnown RBP13.19□□□□□ -0.3
MMP3-203ENST00000524478 TRAPPC3LQ5T215 181 aa13.19□□□□□ -0.3
MMP3-203ENST00000524478 RC3H1Q5TC82 1133 aaKnown RBP13.19□□□□□ -0.3
MMP3-203ENST00000524478 NLGN1Q8N2Q7 840 aa13.19□□□□□ -0.3
MMP3-203ENST00000524478 SRP68Q9UHB9 627 aaKnown RBP13.19□□□□□ -0.3
MMP3-203ENST00000524478 USP42Q9H9J4 1324 aaKnown RBP13.18□□□□□ -0.3
MMP3-203ENST00000524478 DICER1Q9UPY3 1922 aaKnown RBP13.18□□□□□ -0.3
MMP3-203ENST00000524478 C1QBPQ07021 282 aaKnown RBP13.18□□□□□ -0.3
MMP3-203ENST00000524478 RNF181Q9P0P0 153 aa13.18□□□□□ -0.3
MMP3-203ENST00000524478 POLKQ9UBT6 870 aa13.18□□□□□ -0.3
MMP3-203ENST00000524478 RPS6KA4O75676 772 aa13.17□□□□□ -0.3
MMP3-203ENST00000524478 CHRNA5P30532 468 aa13.17□□□□□ -0.3
MMP3-203ENST00000524478 FKBP8Q14318 412 aa13.17□□□□□ -0.3
MMP3-203ENST00000524478 RBM42Q9BTD8 480 aaKnown RBP13.17□□□□□ -0.3
MMP3-203ENST00000524478 PARP3Q9Y6F1 533 aa13.17□□□□□ -0.3
MMP3-203ENST00000524478 SCN7AQ01118 1682 aa13.17□□□□□ -0.3
MMP3-203ENST00000524478 UBR2Q8IWV8 1755 aa13.17□□□□□ -0.3
MMP3-203ENST00000524478 MRC1P22897 1456 aa13.16□□□□□ -0.3
MMP3-203ENST00000524478 SLC24A1O60721 1099 aa13.16□□□□□ -0.3
MMP3-203ENST00000524478 RFC4P35249 363 aa13.16□□□□□ -0.3
MMP3-203ENST00000524478 PRELPP51888 382 aa13.16□□□□□ -0.3
MMP3-203ENST00000524478 RASSF7Q02833 373 aa13.16□□□□□ -0.3
MMP3-203ENST00000524478 TNS4Q8IZW8 715 aa13.16□□□□□ -0.3
MMP3-203ENST00000524478 KDM2BQ8NHM5 1336 aa13.15□□□□□ -0.3
MMP3-203ENST00000524478 CACNA1SQ13698 1873 aa13.15□□□□□ -0.3
MMP3-203ENST00000524478 FER1L6Q2WGJ9 1857 aa13.15□□□□□ -0.3
MMP3-203ENST00000524478 ERVV-2B6SEH9 535 aa13.15□□□□□ -0.3
MMP3-203ENST00000524478 CRKLP46109 303 aaKnown RBP13.15□□□□□ -0.3
MMP3-203ENST00000524478 DALRD3Q5D0E6 543 aaKnown RBP13.15□□□□□ -0.3
MMP3-203ENST00000524478 C16orf71Q8IYS4 520 aaPredicted RBP13.15□□□□□ -0.3
MMP3-203ENST00000524478 PIM2Q9P1W9 311 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms