RNA–Protein interactions for RNA: ENST00000523962.5

NECAB1-206, Transcript of N-terminal EF-hand calcium binding protein 1, humanhuman

TSL 3

Gene NECAB1, Length 662 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAB1-206ENST00000523962 SHANK3Q9BYB0 1731 aa13.66□□□□□ -0.22
NECAB1-206ENST00000523962 RTL1A6NKG5 1358 aa13.66□□□□□ -0.22
NECAB1-206ENST00000523962 PALLDQ8WX93 1383 aa13.66□□□□□ -0.22
NECAB1-206ENST00000523962 TONSLQ96HA7 1378 aa13.66□□□□□ -0.22
NECAB1-206ENST00000523962 SMG6Q86US8 1419 aaKnown RBP13.65□□□□□ -0.22
NECAB1-206ENST00000523962 HSPA6P17066 643 aa13.65□□□□□ -0.22
NECAB1-206ENST00000523962 CYP27B1O15528 508 aa13.64□□□□□ -0.23
NECAB1-206ENST00000523962 PHF14O94880 888 aa13.64□□□□□ -0.23
NECAB1-206ENST00000523962 SMIM5Q71RC9 77 aa13.64□□□□□ -0.23
NECAB1-206ENST00000523962 WWC3Q9ULE0 1092 aa13.64□□□□□ -0.23
NECAB1-206ENST00000523962 LY75O60449 1722 aa13.64□□□□□ -0.23
NECAB1-206ENST00000523962 IGSF1Q8N6C5 1336 aa13.64□□□□□ -0.23
NECAB1-206ENST00000523962 FAM208AQ9UK61 1670 aaKnown RBP13.63□□□□□ -0.23
NECAB1-206ENST00000523962 INSRP06213 1382 aa13.63□□□□□ -0.23
NECAB1-206ENST00000523962 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.63□□□□□ -0.23
NECAB1-206ENST00000523962 PIGBQ92521 554 aa13.63□□□□□ -0.23
NECAB1-206ENST00000523962 DOT1LQ8TEK3 1739 aa13.63□□□□□ -0.23
NECAB1-206ENST00000523962 TUBGCP6Q96RT7 1819 aa13.62□□□□□ -0.23
NECAB1-206ENST00000523962 AMIGO3Q86WK7 504 aa13.62□□□□□ -0.23
NECAB1-206ENST00000523962 GOLGB1Q14789 3259 aaKnown RBP13.61□□□□□ -0.23
NECAB1-206ENST00000523962 SSFA2P28290 1259 aa13.61□□□□□ -0.23
NECAB1-206ENST00000523962 TMF1P82094 1093 aa13.61□□□□□ -0.23
NECAB1-206ENST00000523962 PHF12Q96QT6 1004 aa13.61□□□□□ -0.23
NECAB1-206ENST00000523962 ADCY9O60503 1353 aa13.6□□□□□ -0.23
NECAB1-206ENST00000523962 LOC102724428A0A0B4J2F2 783 aa13.6□□□□□ -0.23
NECAB1-206ENST00000523962 SIK1P57059 783 aa13.6□□□□□ -0.23
NECAB1-206ENST00000523962 NKX1-1Q15270 411 aaPredicted RBP13.6□□□□□ -0.23
NECAB1-206ENST00000523962 SPG7Q9UQ90 795 aa13.6□□□□□ -0.23
NECAB1-206ENST00000523962 FLT4P35916 1363 aa13.59□□□□□ -0.23
NECAB1-206ENST00000523962 LINC00116Q8NCU8 138 aa13.59□□□□□ -0.23
NECAB1-206ENST00000523962 RGPD2P0DJD1 1756 aa13.58□□□□□ -0.23
NECAB1-206ENST00000523962 NSD3Q9BZ95 1437 aa13.58□□□□□ -0.24
NECAB1-206ENST00000523962 KIF3CO14782 793 aa13.58□□□□□ -0.24
NECAB1-206ENST00000523962 PPM1GO15355 546 aaPredicted RBP13.58□□□□□ -0.24
NECAB1-206ENST00000523962 ATP6V1AP38606 617 aa13.58□□□□□ -0.24
NECAB1-206ENST00000523962 MNX1P50219 401 aaPredicted RBP13.58□□□□□ -0.24
NECAB1-206ENST00000523962 TMOD3Q9NYL9 352 aa13.58□□□□□ -0.24
NECAB1-206ENST00000523962 EMILIN1Q9Y6C2 1016 aa13.58□□□□□ -0.24
NECAB1-206ENST00000523962 KIF24Q5T7B8 1368 aa13.58□□□□□ -0.24
NECAB1-206ENST00000523962 GNPATO15228 680 aa13.57□□□□□ -0.24
NECAB1-206ENST00000523962 CDCA8Q53HL2 280 aa13.57□□□□□ -0.24
NECAB1-206ENST00000523962 ASAP1Q9ULH1 1129 aa13.57□□□□□ -0.24
NECAB1-206ENST00000523962 ITPK1Q13572 414 aa13.56□□□□□ -0.24
NECAB1-206ENST00000523962 CEP350Q5VT06 3117 aa13.56□□□□□ -0.24
NECAB1-206ENST00000523962 MMP10P09238 476 aa13.55□□□□□ -0.24
NECAB1-206ENST00000523962 TGFB2P61812 414 aa13.55□□□□□ -0.24
NECAB1-206ENST00000523962 TRAPPC3LQ5T215 181 aa13.55□□□□□ -0.24
NECAB1-206ENST00000523962 IFNL2Q8IZJ0 200 aa13.55□□□□□ -0.24
NECAB1-206ENST00000523962 CARD14Q9BXL6 1004 aa13.55□□□□□ -0.24
NECAB1-206ENST00000523962 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.55□□□□□ -0.24
NECAB1-206ENST00000523962 C5P01031 1676 aa13.55□□□□□ -0.24
NECAB1-206ENST00000523962 A0A0G2JLW4 131 aa13.54□□□□□ -0.24
NECAB1-206ENST00000523962 APLP1P51693 650 aa13.54□□□□□ -0.24
NECAB1-206ENST00000523962 ARHGAP27Q6ZUM4 889 aa13.54□□□□□ -0.24
NECAB1-206ENST00000523962 NLGN1Q8N2Q7 840 aa13.54□□□□□ -0.24
NECAB1-206ENST00000523962 EYA1Q99502 592 aa13.54□□□□□ -0.24
NECAB1-206ENST00000523962 BCS1LQ9Y276 419 aa13.54□□□□□ -0.24
NECAB1-206ENST00000523962 C4BP0C0L5 1744 aa13.53□□□□□ -0.24
NECAB1-206ENST00000523962 TOMM70O94826 608 aa13.53□□□□□ -0.24
NECAB1-206ENST00000523962 PHKG2P15735 406 aa13.53□□□□□ -0.24
NECAB1-206ENST00000523962 ATG3Q9NT62 314 aa13.53□□□□□ -0.24
NECAB1-206ENST00000523962 RTCBQ9Y3I0 505 aaKnown RBP13.53□□□□□ -0.24
NECAB1-206ENST00000523962 WASHC2AQ641Q2 1341 aa13.53□□□□□ -0.24
NECAB1-206ENST00000523962 OTUD5Q96G74 571 aa13.51□□□□□ -0.25
NECAB1-206ENST00000523962 CCDC87Q9NVE4 849 aa13.51□□□□□ -0.25
NECAB1-206ENST00000523962 FCHSD2O94868 740 aa13.5□□□□□ -0.25
NECAB1-206ENST00000523962 DPEP1P16444 411 aa13.5□□□□□ -0.25
NECAB1-206ENST00000523962 RC3H1Q5TC82 1133 aaKnown RBP13.5□□□□□ -0.25
NECAB1-206ENST00000523962 DNAJC5GQ8N7S2 189 aa13.5□□□□□ -0.25
NECAB1-206ENST00000523962 ARHGEF1Q92888 912 aaKnown RBP13.5□□□□□ -0.25
NECAB1-206ENST00000523962 PARP3Q9Y6F1 533 aa13.5□□□□□ -0.25
NECAB1-206ENST00000523962 TAF1LQ8IZX4 1826 aa13.5□□□□□ -0.25
NECAB1-206ENST00000523962 RFC4P35249 363 aa13.49□□□□□ -0.25
NECAB1-206ENST00000523962 POLKQ9UBT6 870 aa13.49□□□□□ -0.25
NECAB1-206ENST00000523962 ERVV-2B6SEH9 535 aa13.48□□□□□ -0.25
NECAB1-206ENST00000523962 POTEB2H3BUK9 544 aa13.48□□□□□ -0.25
NECAB1-206ENST00000523962 RPS6KA4O75676 772 aa13.48□□□□□ -0.25
NECAB1-206ENST00000523962 SLC4A9Q96Q91 983 aa13.48□□□□□ -0.25
NECAB1-206ENST00000523962 NMRK2Q9NPI5 230 aa13.48□□□□□ -0.25
NECAB1-206ENST00000523962 PXDNLA1KZ92 1463 aa13.48□□□□□ -0.25
NECAB1-206ENST00000523962 NCAPD2Q15021 1401 aa13.47□□□□□ -0.25
NECAB1-206ENST00000523962 UBR3Q6ZT12 1888 aa13.47□□□□□ -0.25
NECAB1-206ENST00000523962 GYS1P13807 737 aa13.47□□□□□ -0.25
NECAB1-206ENST00000523962 EIF4A2Q14240 407 aaKnown RBP13.47□□□□□ -0.25
NECAB1-206ENST00000523962 C16orf71Q8IYS4 520 aaPredicted RBP13.47□□□□□ -0.25
NECAB1-206ENST00000523962 ITGB4P16144 1822 aa13.46□□□□□ -0.25
NECAB1-206ENST00000523962 HSP90AB1P08238 724 aaKnown RBP13.46□□□□□ -0.25
NECAB1-206ENST00000523962 TNNT2P45379 298 aaPredicted RBP13.46□□□□□ -0.25
NECAB1-206ENST00000523962 CABP4P57796 275 aa13.46□□□□□ -0.25
NECAB1-206ENST00000523962 PLEKHO1Q53GL0 409 aaPredicted RBP13.46□□□□□ -0.25
NECAB1-206ENST00000523962 C9orf131Q5VYM1 1079 aa13.46□□□□□ -0.25
NECAB1-206ENST00000523962 DCAF5Q96JK2 942 aa13.46□□□□□ -0.25
NECAB1-206ENST00000523962 PIM2Q9P1W9 311 aa13.46□□□□□ -0.25
NECAB1-206ENST00000523962 TOGARAM1Q9Y4F4 1720 aa13.46□□□□□ -0.25
NECAB1-206ENST00000523962 KCNA3P22001 575 aa13.45□□□□□ -0.26
NECAB1-206ENST00000523962 RBM46Q8TBY0 533 aaKnown RBP13.45□□□□□ -0.26
NECAB1-206ENST00000523962 CNTNAP4Q9C0A0 1308 aa13.44□□□□□ -0.26
NECAB1-206ENST00000523962 MAP2P11137 1827 aaKnown RBP13.44□□□□□ -0.26
NECAB1-206ENST00000523962 MS4A3Q96HJ5 214 aa13.44□□□□□ -0.26
NECAB1-206ENST00000523962 PKD1L3Q7Z443 1732 aa13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 67.1 ms