RNA–Protein interactions for RNA: ENST00000523912.5

CTNNA1-240, Transcript of catenin alpha 1, humanhuman

TSL 4

Gene CTNNA1, Length 545 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-240ENST00000523912 C5P01031 1676 aa12.02□□□□□ -0.49
CTNNA1-240ENST00000523912 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.01□□□□□ -0.49
CTNNA1-240ENST00000523912 ATP6V1AP38606 617 aa12.01□□□□□ -0.49
CTNNA1-240ENST00000523912 CABP4P57796 275 aa12.01□□□□□ -0.49
CTNNA1-240ENST00000523912 ASAP1Q9ULH1 1129 aa12.01□□□□□ -0.49
CTNNA1-240ENST00000523912 GNPATO15228 680 aa12□□□□□ -0.49
CTNNA1-240ENST00000523912 IL13P35225 146 aa12□□□□□ -0.49
CTNNA1-240ENST00000523912 MTHFSP49914 203 aa12□□□□□ -0.49
CTNNA1-240ENST00000523912 IFFO2Q5TF58 517 aa12□□□□□ -0.49
CTNNA1-240ENST00000523912 AEBP1Q8IUX7 1158 aa12□□□□□ -0.49
CTNNA1-240ENST00000523912 LINC00116Q8NCU8 138 aa12□□□□□ -0.49
CTNNA1-240ENST00000523912 ATG3Q9NT62 314 aa12□□□□□ -0.49
CTNNA1-240ENST00000523912 ADCY9O60503 1353 aa12□□□□□ -0.49
CTNNA1-240ENST00000523912 KDRP35968 1356 aa12□□□□□ -0.49
CTNNA1-240ENST00000523912 ATP10DQ9P241 1426 aa12□□□□□ -0.49
CTNNA1-240ENST00000523912 C4BP0C0L5 1744 aa12□□□□□ -0.49
CTNNA1-240ENST00000523912 TAF1LQ8IZX4 1826 aa12□□□□□ -0.49
CTNNA1-240ENST00000523912 UTRNP46939 3433 aa11.99□□□□□ -0.49
CTNNA1-240ENST00000523912 CC2D1BQ5T0F9 858 aaKnown RBP11.99□□□□□ -0.49
CTNNA1-240ENST00000523912 ITGB4P16144 1822 aa11.98□□□□□ -0.49
CTNNA1-240ENST00000523912 RBM42Q9BTD8 480 aaKnown RBP11.98□□□□□ -0.49
CTNNA1-240ENST00000523912 GPBP1L1Q9HC44 474 aaPredicted RBP11.98□□□□□ -0.49
CTNNA1-240ENST00000523912 KDM6AO15550 1401 aaPredicted RBP11.97□□□□□ -0.49
CTNNA1-240ENST00000523912 NPC1L1Q9UHC9 1359 aa11.97□□□□□ -0.49
CTNNA1-240ENST00000523912 DIAPH1O60610 1272 aaKnown RBP11.97□□□□□ -0.49
CTNNA1-240ENST00000523912 ITPK1Q13572 414 aa11.97□□□□□ -0.49
CTNNA1-240ENST00000523912 RTCBQ9Y3I0 505 aaKnown RBP11.97□□□□□ -0.49
CTNNA1-240ENST00000523912 ADRA2BP18089 450 aa11.96□□□□□ -0.49
CTNNA1-240ENST00000523912 AKAP4Q5JQC9 854 aa11.96□□□□□ -0.49
CTNNA1-240ENST00000523912 UBR3Q6ZT12 1888 aa11.95□□□□□ -0.5
CTNNA1-240ENST00000523912 CNTNAP4Q9C0A0 1308 aa11.95□□□□□ -0.5
CTNNA1-240ENST00000523912 PER1O15534 1290 aaPredicted RBP11.95□□□□□ -0.5
CTNNA1-240ENST00000523912 HSPA6P17066 643 aa11.95□□□□□ -0.5
CTNNA1-240ENST00000523912 TRAPPC3LQ5T215 181 aa11.95□□□□□ -0.5
CTNNA1-240ENST00000523912 HMOX1P09601 288 aa11.94□□□□□ -0.5
CTNNA1-240ENST00000523912 RC3H1Q5TC82 1133 aaKnown RBP11.94□□□□□ -0.5
CTNNA1-240ENST00000523912 AMIGO3Q86WK7 504 aa11.94□□□□□ -0.5
CTNNA1-240ENST00000523912 CFAP53Q96M91 514 aa11.94□□□□□ -0.5
CTNNA1-240ENST00000523912 PTCD1O75127 700 aaKnown RBP11.93□□□□□ -0.5
CTNNA1-240ENST00000523912 CNGB1Q14028 1251 aaPredicted RBP11.93□□□□□ -0.5
CTNNA1-240ENST00000523912 NFATC2IPQ8NCF5 419 aa11.93□□□□□ -0.5
CTNNA1-240ENST00000523912 CICQ96RK0 1608 aaPredicted RBP11.93□□□□□ -0.5
CTNNA1-240ENST00000523912 GOLGB1Q14789 3259 aaKnown RBP11.92□□□□□ -0.5
CTNNA1-240ENST00000523912 U2SURPO15042 1029 aaKnown RBP11.92□□□□□ -0.5
CTNNA1-240ENST00000523912 MMP10P09238 476 aa11.92□□□□□ -0.5
CTNNA1-240ENST00000523912 RFC4P35249 363 aa11.92□□□□□ -0.5
CTNNA1-240ENST00000523912 TGFB2P61812 414 aa11.92□□□□□ -0.5
CTNNA1-240ENST00000523912 NLGN1Q8N2Q7 840 aa11.92□□□□□ -0.5
CTNNA1-240ENST00000523912 SLC52A2Q9HAB3 445 aa11.92□□□□□ -0.5
CTNNA1-240ENST00000523912 RPS6KA4O75676 772 aa11.91□□□□□ -0.5
CTNNA1-240ENST00000523912 SMIM5Q71RC9 77 aa11.91□□□□□ -0.5
CTNNA1-240ENST00000523912 GAS2L2Q8NHY3 880 aa11.91□□□□□ -0.5
CTNNA1-240ENST00000523912 SLC4A9Q96Q91 983 aa11.91□□□□□ -0.5
CTNNA1-240ENST00000523912 ZNF831Q5JPB2 1677 aa11.91□□□□□ -0.5
CTNNA1-240ENST00000523912 KIF3CO14782 793 aa11.9□□□□□ -0.5
CTNNA1-240ENST00000523912 RNMTO43148 476 aaKnown RBP11.9□□□□□ -0.5
CTNNA1-240ENST00000523912 CRKLP46109 303 aaKnown RBP11.9□□□□□ -0.5
CTNNA1-240ENST00000523912 NUDCQ9Y266 331 aa11.9□□□□□ -0.5
CTNNA1-240ENST00000523912 MRC1P22897 1456 aa11.89□□□□□ -0.51
CTNNA1-240ENST00000523912 MTHFSDQ2M296 383 aaKnown RBP11.89□□□□□ -0.51
CTNNA1-240ENST00000523912 TTC5Q8N0Z6 440 aa11.89□□□□□ -0.51
CTNNA1-240ENST00000523912 ARHGEF1Q92888 912 aaKnown RBP11.89□□□□□ -0.51
CTNNA1-240ENST00000523912 CCDC87Q9NVE4 849 aa11.89□□□□□ -0.51
CTNNA1-240ENST00000523912 COL3A1P02461 1466 aaPredicted RBP11.89□□□□□ -0.51
CTNNA1-240ENST00000523912 KIF13BQ9NQT8 1826 aa11.88□□□□□ -0.51
CTNNA1-240ENST00000523912 PARP3Q9Y6F1 533 aa11.88□□□□□ -0.51
CTNNA1-240ENST00000523912 PXDNLA1KZ92 1463 aa11.88□□□□□ -0.51
CTNNA1-240ENST00000523912 ZPR1O75312 459 aa11.87□□□□□ -0.51
CTNNA1-240ENST00000523912 GYS1P13807 737 aa11.87□□□□□ -0.51
CTNNA1-240ENST00000523912 APLP1P51693 650 aa11.87□□□□□ -0.51
CTNNA1-240ENST00000523912 TEFQ10587 303 aa11.87□□□□□ -0.51
CTNNA1-240ENST00000523912 LGR6Q9HBX8 967 aa11.87□□□□□ -0.51
CTNNA1-240ENST00000523912 USP42Q9H9J4 1324 aaKnown RBP11.86□□□□□ -0.51
CTNNA1-240ENST00000523912 C10orf71Q711Q0 1435 aa11.86□□□□□ -0.51
CTNNA1-240ENST00000523912 GNAT3A8MTJ3 354 aa11.86□□□□□ -0.51
CTNNA1-240ENST00000523912 TOMM70O94826 608 aa11.86□□□□□ -0.51
CTNNA1-240ENST00000523912 DNAJC10Q8IXB1 793 aa11.86□□□□□ -0.51
CTNNA1-240ENST00000523912 VSIG10Q8N0Z9 540 aa11.86□□□□□ -0.51
CTNNA1-240ENST00000523912 ZNF526Q8TF50 670 aaPredicted RBP11.86□□□□□ -0.51
CTNNA1-240ENST00000523912 COL5A3P25940 1745 aaPredicted RBP11.86□□□□□ -0.51
CTNNA1-240ENST00000523912 STARD3NLO95772 234 aa11.85□□□□□ -0.51
CTNNA1-240ENST00000523912 SLC39A6Q13433 755 aa11.85□□□□□ -0.51
CTNNA1-240ENST00000523912 SCN11AQ9UI33 1791 aa11.84□□□□□ -0.51
CTNNA1-240ENST00000523912 KIAA1551Q9HCM1 1747 aa11.84□□□□□ -0.51
CTNNA1-240ENST00000523912 U2AF1L5P0DN76 240 aaPredicted RBP11.84□□□□□ -0.51
CTNNA1-240ENST00000523912 PRKAR2BP31323 418 aa11.84□□□□□ -0.51
CTNNA1-240ENST00000523912 U2AF1Q01081 240 aaKnown RBP eCLIP11.84□□□□□ -0.51
CTNNA1-240ENST00000523912 INTS5Q6P9B9 1019 aaKnown RBP11.84□□□□□ -0.51
CTNNA1-240ENST00000523912 WWC3Q9ULE0 1092 aa11.84□□□□□ -0.51
CTNNA1-240ENST00000523912 SOS1Q07889 1333 aaPredicted RBP11.84□□□□□ -0.51
CTNNA1-240ENST00000523912 A0A087WZG4 1122 aa11.83□□□□□ -0.52
CTNNA1-240ENST00000523912 NEFMP07197 916 aa11.83□□□□□ -0.52
CTNNA1-240ENST00000523912 CYP19A1P11511 503 aaPredicted RBP11.83□□□□□ -0.52
CTNNA1-240ENST00000523912 PPP2R1AP30153 589 aa11.83□□□□□ -0.52
CTNNA1-240ENST00000523912 NPM2Q86SE8 214 aaKnown RBP11.83□□□□□ -0.52
CTNNA1-240ENST00000523912 RTF1Q92541 710 aaKnown RBP11.83□□□□□ -0.52
CTNNA1-240ENST00000523912 TEX13AQ9BXU3 409 aaPredicted RBP11.83□□□□□ -0.52
CTNNA1-240ENST00000523912 SRP68Q9UHB9 627 aaKnown RBP11.83□□□□□ -0.52
CTNNA1-240ENST00000523912 BCS1LQ9Y276 419 aa11.83□□□□□ -0.52
CTNNA1-240ENST00000523912 COL15A1P39059 1388 aa11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 221.8 ms