RNA–Protein interactions for RNA: ENST00000523702.5

CPS1-211, Transcript of carbamoyl-phosphate synthase 1, humanhuman

TSL 4

Gene CPS1, Length 546 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPS1-211ENST00000523702 ARID4AP29374 1257 aaPredicted RBP9.98□□□□□ -0.81
CPS1-211ENST00000523702 SERPINB4P48594 390 aa9.98□□□□□ -0.81
CPS1-211ENST00000523702 WDR4P57081 412 aaKnown RBP9.98□□□□□ -0.81
CPS1-211ENST00000523702 TBCELQ5QJ74 424 aa9.98□□□□□ -0.81
CPS1-211ENST00000523702 CYP2U1Q7Z449 544 aa9.98□□□□□ -0.81
CPS1-211ENST00000523702 HPS1Q92902 700 aa9.98□□□□□ -0.81
CPS1-211ENST00000523702 SLC4A9Q96Q91 983 aa9.98□□□□□ -0.81
CPS1-211ENST00000523702 FKBP5Q13451 457 aaPredicted RBP9.97□□□□□ -0.81
CPS1-211ENST00000523702 B4GALNT3Q6L9W6 998 aa9.97□□□□□ -0.81
CPS1-211ENST00000523702 Q6ZVU0 165 aa9.97□□□□□ -0.81
CPS1-211ENST00000523702 XAGE2Q96GT9 111 aa9.97□□□□□ -0.81
CPS1-211ENST00000523702 TSPAN10Q9H1Z9 355 aaPredicted RBP9.97□□□□□ -0.81
CPS1-211ENST00000523702 A0A1W2PRU2 124 aa9.96□□□□□ -0.82
CPS1-211ENST00000523702 PATL2C9JE40 543 aaKnown RBP9.96□□□□□ -0.82
CPS1-211ENST00000523702 ADH1AP07327 375 aa9.96□□□□□ -0.82
CPS1-211ENST00000523702 C1orf216Q8TAB5 229 aa9.96□□□□□ -0.82
CPS1-211ENST00000523702 SCG3Q8WXD2 468 aaKnown RBP9.96□□□□□ -0.82
CPS1-211ENST00000523702 MKNK1Q9BUB5 465 aa9.96□□□□□ -0.82
CPS1-211ENST00000523702 SEPT3Q9UH03 358 aa9.96□□□□□ -0.82
CPS1-211ENST00000523702 HRH3Q9Y5N1 445 aa9.96□□□□□ -0.82
CPS1-211ENST00000523702 USP3Q9Y6I4 520 aa9.96□□□□□ -0.82
CPS1-211ENST00000523702 ATAD2Q6PL18 1390 aa9.96□□□□□ -0.82
CPS1-211ENST00000523702 TMCO4Q5TGY1 634 aa9.95□□□□□ -0.82
CPS1-211ENST00000523702 CNKSR1Q969H4 720 aa9.95□□□□□ -0.82
CPS1-211ENST00000523702 ZNF395Q9H8N7 513 aaPredicted RBP9.95□□□□□ -0.82
CPS1-211ENST00000523702 A6NJY4 79 aa9.94□□□□□ -0.82
CPS1-211ENST00000523702 BACH1O14867 736 aa9.94□□□□□ -0.82
CPS1-211ENST00000523702 PTGIRP43119 386 aa9.94□□□□□ -0.82
CPS1-211ENST00000523702 SMTNP53814 917 aa9.94□□□□□ -0.82
CPS1-211ENST00000523702 PRR20EP86478 221 aa9.94□□□□□ -0.82
CPS1-211ENST00000523702 PRR20CP86479 221 aa9.94□□□□□ -0.82
CPS1-211ENST00000523702 PRR20DP86480 221 aa9.94□□□□□ -0.82
CPS1-211ENST00000523702 PRR20BP86481 221 aa9.94□□□□□ -0.82
CPS1-211ENST00000523702 PRR20AP86496 221 aa9.94□□□□□ -0.82
CPS1-211ENST00000523702 RELBQ01201 579 aa9.94□□□□□ -0.82
CPS1-211ENST00000523702 CCER1Q8TC90 406 aaPredicted RBP9.94□□□□□ -0.82
CPS1-211ENST00000523702 MFAP1P55081 439 aaKnown RBP9.93□□□□□ -0.82
CPS1-211ENST00000523702 FOXK2Q01167 660 aa9.93□□□□□ -0.82
CPS1-211ENST00000523702 ANO2Q9NQ90 1003 aa9.93□□□□□ -0.82
CPS1-211ENST00000523702 CCDC9Q9Y3X0 531 aaKnown RBP9.93□□□□□ -0.82
CPS1-211ENST00000523702 NAA30Q147X3 362 aaPredicted RBP9.92□□□□□ -0.82
CPS1-211ENST00000523702 MTFR1Q15390 333 aa9.92□□□□□ -0.82
CPS1-211ENST00000523702 CHMP7Q8WUX9 453 aaPredicted RBP9.92□□□□□ -0.82
CPS1-211ENST00000523702 ESYT1Q9BSJ8 1104 aa9.92□□□□□ -0.82
CPS1-211ENST00000523702 SCHIP1Q9P0W5 487 aaPredicted RBP9.92□□□□□ -0.82
CPS1-211ENST00000523702 IGFBP4P22692 258 aa9.91□□□□□ -0.82
CPS1-211ENST00000523702 CENPCQ03188 943 aa9.91□□□□□ -0.82
CPS1-211ENST00000523702 ESCO1Q5FWF5 840 aa9.91□□□□□ -0.82
CPS1-211ENST00000523702 SND1Q7KZF4 910 aaKnown RBP eCLIP9.91□□□□□ -0.82
CPS1-211ENST00000523702 IQSEC3Q9UPP2 1182 aaPredicted RBP9.91□□□□□ -0.82
CPS1-211ENST00000523702 MEN1O00255 615 aa9.9□□□□□ -0.82
CPS1-211ENST00000523702 CLN3Q13286 438 aa9.9□□□□□ -0.82
CPS1-211ENST00000523702 SLC9A9Q8IVB4 645 aa9.9□□□□□ -0.82
CPS1-211ENST00000523702 TRIM52Q96A61 297 aa9.9□□□□□ -0.82
CPS1-211ENST00000523702 FHDC1Q9C0D6 1143 aaPredicted RBP9.9□□□□□ -0.82
CPS1-211ENST00000523702 SOWAHDA6NJG2 315 aa9.89□□□□□ -0.83
CPS1-211ENST00000523702 ABL1P00519 1130 aa9.89□□□□□ -0.83
CPS1-211ENST00000523702 ZNF211Q13398 564 aaPredicted RBP9.89□□□□□ -0.83
CPS1-211ENST00000523702 MTMR3Q13615 1198 aa9.89□□□□□ -0.83
CPS1-211ENST00000523702 SH3PXD2AQ5TCZ1 1133 aa9.89□□□□□ -0.83
CPS1-211ENST00000523702 RGS22Q8NE09 1264 aa9.89□□□□□ -0.83
CPS1-211ENST00000523702 GTF3C2Q8WUA4 911 aaPredicted RBP9.89□□□□□ -0.83
CPS1-211ENST00000523702 MTMR7Q9Y216 660 aa9.89□□□□□ -0.83
CPS1-211ENST00000523702 DNMT3AQ9Y6K1 912 aaPredicted RBP9.89□□□□□ -0.83
CPS1-211ENST00000523702 PPP1R12BO60237 982 aaPredicted RBP9.88□□□□□ -0.83
CPS1-211ENST00000523702 TLR1Q15399 786 aa9.88□□□□□ -0.83
CPS1-211ENST00000523702 ECM1Q16610 540 aa9.88□□□□□ -0.83
CPS1-211ENST00000523702 ZNF295-AS1Q8N0V1 137 aa9.88□□□□□ -0.83
CPS1-211ENST00000523702 SAP130Q9H0E3 1048 aa9.88□□□□□ -0.83
CPS1-211ENST00000523702 CDK2AP1O14519 115 aa9.87□□□□□ -0.83
CPS1-211ENST00000523702 MEIOBQ8N635 442 aa9.87□□□□□ -0.83
CPS1-211ENST00000523702 C2orf49Q9BVC5 232 aaPredicted RBP9.87□□□□□ -0.83
CPS1-211ENST00000523702 PDZRN3Q9UPQ7 1066 aa9.87□□□□□ -0.83
CPS1-211ENST00000523702 ZDHHC1Q8WTX9 485 aa9.86□□□□□ -0.83
CPS1-211ENST00000523702 PARP3Q9Y6F1 533 aa9.86□□□□□ -0.83
CPS1-211ENST00000523702 CAPN5O15484 640 aaPredicted RBP9.85□□□□□ -0.83
CPS1-211ENST00000523702 FOXO3O43524 673 aa9.85□□□□□ -0.83
CPS1-211ENST00000523702 INSM2Q96T92 566 aaPredicted RBP9.85□□□□□ -0.83
CPS1-211ENST00000523702 CCDC27Q2M243 656 aa9.84□□□□□ -0.83
CPS1-211ENST00000523702 NLRP3Q96P20 1036 aa9.84□□□□□ -0.83
CPS1-211ENST00000523702 ICMTO60725 284 aa9.83□□□□□ -0.84
CPS1-211ENST00000523702 CTSOP43234 321 aaPredicted RBP9.83□□□□□ -0.84
CPS1-211ENST00000523702 NOM1Q5C9Z4 860 aaKnown RBP9.83□□□□□ -0.84
CPS1-211ENST00000523702 FOXD4L5Q5VV16 416 aaPredicted RBP9.83□□□□□ -0.84
CPS1-211ENST00000523702 PPARGC1BQ86YN6 1023 aaKnown RBP9.83□□□□□ -0.84
CPS1-211ENST00000523702 FOXD4L4Q8WXT5 416 aaPredicted RBP9.83□□□□□ -0.84
CPS1-211ENST00000523702 GRIP2Q9C0E4 1043 aa9.83□□□□□ -0.84
CPS1-211ENST00000523702 HCN4Q9Y3Q4 1203 aa9.83□□□□□ -0.84
CPS1-211ENST00000523702 PTCD1O75127 700 aaKnown RBP9.82□□□□□ -0.84
CPS1-211ENST00000523702 NOS2P35228 1153 aa9.82□□□□□ -0.84
CPS1-211ENST00000523702 COL26A1Q96A83 441 aa9.82□□□□□ -0.84
CPS1-211ENST00000523702 ZSCAN10Q96SZ4 725 aaPredicted RBP9.82□□□□□ -0.84
CPS1-211ENST00000523702 LRFN2Q9ULH4 789 aa9.82□□□□□ -0.84
CPS1-211ENST00000523702 FAM187AA6NFU0 413 aa9.81□□□□□ -0.84
CPS1-211ENST00000523702 H3BRB1 525 aa9.81□□□□□ -0.84
CPS1-211ENST00000523702 EML1O00423 815 aa9.81□□□□□ -0.84
CPS1-211ENST00000523702 SPINT1O43278 529 aa9.81□□□□□ -0.84
CPS1-211ENST00000523702 PSMA6P60900 246 aaKnown RBP9.81□□□□□ -0.84
CPS1-211ENST00000523702 FAM26DQ5JW98 314 aa9.81□□□□□ -0.84
CPS1-211ENST00000523702 COX20Q5RI15 118 aa9.81□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 75.7 ms