RNA–Protein interactions for RNA: ENST00000523613.5

HMBOX1-210, Transcript of homeobox containing 1, humanhuman

TSL 1 (best) BASIC

Gene HMBOX1, Length 1,730 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMBOX1-210ENST00000523613 SLC52A2Q9HAB3 445 aa19.39■□□□□ 0.7
HMBOX1-210ENST00000523613 AFF2P51816 1311 aa19.39■□□□□ 0.69
HMBOX1-210ENST00000523613 TNS2Q63HR2 1409 aa19.38■□□□□ 0.69
HMBOX1-210ENST00000523613 SMC4Q9NTJ3 1288 aa19.38■□□□□ 0.69
HMBOX1-210ENST00000523613 MRC1P22897 1456 aa19.38■□□□□ 0.69
HMBOX1-210ENST00000523613 SIPA1L3O60292 1781 aaPredicted RBP19.37■□□□□ 0.69
HMBOX1-210ENST00000523613 PLIN1O60240 522 aa19.37■□□□□ 0.69
HMBOX1-210ENST00000523613 CABP4P57796 275 aa19.37■□□□□ 0.69
HMBOX1-210ENST00000523613 ALDH1L2Q3SY69 923 aa19.37■□□□□ 0.69
HMBOX1-210ENST00000523613 BCL2L13Q9BXK5 485 aa19.37■□□□□ 0.69
HMBOX1-210ENST00000523613 CANXP27824 592 aaKnown RBP19.37■□□□□ 0.69
HMBOX1-210ENST00000523613 DDB1Q16531 1140 aa19.37■□□□□ 0.69
HMBOX1-210ENST00000523613 KRT24Q2M2I5 525 aa19.37■□□□□ 0.69
HMBOX1-210ENST00000523613 KDM3BQ7LBC6 1761 aa19.36■□□□□ 0.69
HMBOX1-210ENST00000523613 ERVV-2B6SEH9 535 aa19.36■□□□□ 0.69
HMBOX1-210ENST00000523613 NFATC2IPQ8NCF5 419 aa19.36■□□□□ 0.69
HMBOX1-210ENST00000523613 SSH1Q8WYL5 1049 aa19.36■□□□□ 0.69
HMBOX1-210ENST00000523613 FBXO41Q8TF61 875 aa19.35■□□□□ 0.69
HMBOX1-210ENST00000523613 SOS1Q07889 1333 aaPredicted RBP19.35■□□□□ 0.69
HMBOX1-210ENST00000523613 FAM98CQ17RN3 349 aaKnown RBP19.34■□□□□ 0.69
HMBOX1-210ENST00000523613 FRAT1Q92837 279 aaPredicted RBP19.34■□□□□ 0.69
HMBOX1-210ENST00000523613 TRPC5Q9UL62 973 aaPredicted RBP19.34■□□□□ 0.69
HMBOX1-210ENST00000523613 EIF4A1P60842 406 aaKnown RBP19.33■□□□□ 0.68
HMBOX1-210ENST00000523613 ERICH6BQ5W0A0 696 aa19.33■□□□□ 0.68
HMBOX1-210ENST00000523613 KCNQ3O43525 872 aa19.32■□□□□ 0.68
HMBOX1-210ENST00000523613 ATRNO75882 1429 aa19.32■□□□□ 0.68
HMBOX1-210ENST00000523613 KIF16BQ96L93 1317 aa19.32■□□□□ 0.68
HMBOX1-210ENST00000523613 A0A0G2JS52 829 aa19.31■□□□□ 0.68
HMBOX1-210ENST00000523613 MYT1Q01538 1121 aa19.31■□□□□ 0.68
HMBOX1-210ENST00000523613 ZNF790Q6PG37 636 aa19.31■□□□□ 0.68
HMBOX1-210ENST00000523613 TTC5Q8N0Z6 440 aa19.31■□□□□ 0.68
HMBOX1-210ENST00000523613 GJD4Q96KN9 370 aaPredicted RBP19.31■□□□□ 0.68
HMBOX1-210ENST00000523613 HOXB7P09629 217 aa19.3■□□□□ 0.68
HMBOX1-210ENST00000523613 BRPF1P55201 1214 aaPredicted RBP19.3■□□□□ 0.68
HMBOX1-210ENST00000523613 ZKSCAN2Q63HK3 967 aa19.3■□□□□ 0.68
HMBOX1-210ENST00000523613 IPO8O15397 1037 aaKnown RBP19.29■□□□□ 0.68
HMBOX1-210ENST00000523613 SLC39A6Q13433 755 aa19.29■□□□□ 0.68
HMBOX1-210ENST00000523613 MRPL50Q8N5N7 158 aaKnown RBP19.29■□□□□ 0.68
HMBOX1-210ENST00000523613 CHMP4AQ9BY43 222 aa19.29■□□□□ 0.68
HMBOX1-210ENST00000523613 TMOD3Q9NYL9 352 aa19.29■□□□□ 0.68
HMBOX1-210ENST00000523613 TOGARAM1Q9Y4F4 1720 aa19.28■□□□□ 0.68
HMBOX1-210ENST00000523613 TCERG1O14776 1098 aaKnown RBP19.28■□□□□ 0.68
HMBOX1-210ENST00000523613 GLI3P10071 1580 aa19.28■□□□□ 0.68
HMBOX1-210ENST00000523613 PDE3AQ14432 1141 aa19.28■□□□□ 0.68
HMBOX1-210ENST00000523613 C20orf194Q5TEA3 1177 aa19.28■□□□□ 0.68
HMBOX1-210ENST00000523613 CCDC30Q5VVM6 783 aa19.28■□□□□ 0.68
HMBOX1-210ENST00000523613 QTRT2Q9H974 415 aaKnown RBP19.28■□□□□ 0.68
HMBOX1-210ENST00000523613 NOB1Q9ULX3 412 aaKnown RBP19.28■□□□□ 0.68
HMBOX1-210ENST00000523613 MS4A1P11836 297 aa19.27■□□□□ 0.68
HMBOX1-210ENST00000523613 MARCH10Q8NA82 808 aaPredicted RBP19.27■□□□□ 0.68
HMBOX1-210ENST00000523613 STK31Q9BXU1 1019 aa19.27■□□□□ 0.68
HMBOX1-210ENST00000523613 HDGFL1Q5TGJ6 251 aa19.26■□□□□ 0.67
HMBOX1-210ENST00000523613 HEG1Q9ULI3 1381 aa19.26■□□□□ 0.67
HMBOX1-210ENST00000523613 THSD7AQ9UPZ6 1657 aa19.26■□□□□ 0.67
HMBOX1-210ENST00000523613 GIGYF1O75420 1035 aaPredicted RBP19.25■□□□□ 0.67
HMBOX1-210ENST00000523613 ATF7IPQ6VMQ6 1270 aa19.25■□□□□ 0.67
HMBOX1-210ENST00000523613 FMNL2Q96PY5 1086 aa19.25■□□□□ 0.67
HMBOX1-210ENST00000523613 CRBNQ96SW2 442 aa19.25■□□□□ 0.67
HMBOX1-210ENST00000523613 ZNF772Q68DY9 489 aaPredicted RBP19.24■□□□□ 0.67
HMBOX1-210ENST00000523613 FTSJ3Q8IY81 847 aaKnown RBP19.24■□□□□ 0.67
HMBOX1-210ENST00000523613 ARHGAP45Q92619 1136 aa19.24■□□□□ 0.67
HMBOX1-210ENST00000523613 SLC4A2P04920 1241 aa19.23■□□□□ 0.67
HMBOX1-210ENST00000523613 EIF2S2P20042 333 aaKnown RBP19.23■□□□□ 0.67
HMBOX1-210ENST00000523613 EXOC6Q8TAG9 804 aa19.23■□□□□ 0.67
HMBOX1-210ENST00000523613 NECTIN2Q92692 538 aa19.23■□□□□ 0.67
HMBOX1-210ENST00000523613 ZNF496Q96IT1 587 aaPredicted RBP19.23■□□□□ 0.67
HMBOX1-210ENST00000523613 TRIM27P14373 513 aa19.22■□□□□ 0.67
HMBOX1-210ENST00000523613 ITGB4P16144 1822 aa19.22■□□□□ 0.67
HMBOX1-210ENST00000523613 PAPPAQ13219 1627 aa19.22■□□□□ 0.67
HMBOX1-210ENST00000523613 DZIP1LQ8IYY4 767 aaKnown RBP19.22■□□□□ 0.67
HMBOX1-210ENST00000523613 PANK1Q8TE04 598 aa19.22■□□□□ 0.67
HMBOX1-210ENST00000523613 DOT1LQ8TEK3 1739 aa19.22■□□□□ 0.67
HMBOX1-210ENST00000523613 PIGBQ92521 554 aa19.22■□□□□ 0.67
HMBOX1-210ENST00000523613 SYTL4Q96C24 671 aaPredicted RBP19.22■□□□□ 0.67
HMBOX1-210ENST00000523613 BCL9O00512 1426 aa19.22■□□□□ 0.67
HMBOX1-210ENST00000523613 ONECUT3O60422 494 aaPredicted RBP19.22■□□□□ 0.67
HMBOX1-210ENST00000523613 SNRPA1P09661 255 aaKnown RBP19.22■□□□□ 0.67
HMBOX1-210ENST00000523613 CLUAP1Q96AJ1 413 aa19.22■□□□□ 0.67
HMBOX1-210ENST00000523613 PRIM1P49642 420 aaKnown RBP19.21■□□□□ 0.67
HMBOX1-210ENST00000523613 API5Q9BZZ5 524 aaKnown RBP19.21■□□□□ 0.67
HMBOX1-210ENST00000523613 PPP4R2Q9NY27 417 aa19.21■□□□□ 0.67
HMBOX1-210ENST00000523613 TNNQ9UQP3 1299 aa19.2■□□□□ 0.66
HMBOX1-210ENST00000523613 PTPRCP08575 1304 aa19.2■□□□□ 0.66
HMBOX1-210ENST00000523613 SEPT12Q8IYM1 358 aa19.2■□□□□ 0.66
HMBOX1-210ENST00000523613 UBR2Q8IWV8 1755 aa19.19■□□□□ 0.66
HMBOX1-210ENST00000523613 PRAMEF22A3QJZ6 481 aa19.19■□□□□ 0.66
HMBOX1-210ENST00000523613 RLBP1P12271 317 aa19.19■□□□□ 0.66
HMBOX1-210ENST00000523613 ACSBG1Q96GR2 724 aa19.19■□□□□ 0.66
HMBOX1-210ENST00000523613 COG6Q9Y2V7 657 aa19.19■□□□□ 0.66
HMBOX1-210ENST00000523613 KCPQ6ZWJ8 1503 aa19.19■□□□□ 0.66
HMBOX1-210ENST00000523613 ASAP1Q9ULH1 1129 aa19.18■□□□□ 0.66
HMBOX1-210ENST00000523613 C5P01031 1676 aa19.17■□□□□ 0.66
HMBOX1-210ENST00000523613 PTCD1O75127 700 aaKnown RBP19.17■□□□□ 0.66
HMBOX1-210ENST00000523613 ATG3Q9NT62 314 aa19.17■□□□□ 0.66
HMBOX1-210ENST00000523613 CHPF2Q9P2E5 772 aa19.17■□□□□ 0.66
HMBOX1-210ENST00000523613 DBF4Q9UBU7 674 aaPredicted RBP19.17■□□□□ 0.66
HMBOX1-210ENST00000523613 CACNA1FO60840 1977 aa19.17■□□□□ 0.66
HMBOX1-210ENST00000523613 MVPQ14764 893 aaKnown RBP19.16■□□□□ 0.66
HMBOX1-210ENST00000523613 G2E3Q7L622 706 aa19.16■□□□□ 0.66
HMBOX1-210ENST00000523613 KAT6BQ8WYB5 2073 aa19.16■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms