RNA–Protein interactions for RNA: ENST00000523487.1

RNF130-208, Transcript of ring finger protein 130, humanhuman

TSL 3

Gene RNF130, Length 697 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF130-208ENST00000523487 LINC00116Q8NCU8 138 aa13.09□□□□□ -0.31
RNF130-208ENST00000523487 GNPATO15228 680 aa13.08□□□□□ -0.32
RNF130-208ENST00000523487 YBX3P16989 372 aaKnown RBP eCLIP13.08□□□□□ -0.32
RNF130-208ENST00000523487 MTHFSP49914 203 aa13.08□□□□□ -0.32
RNF130-208ENST00000523487 CABP4P57796 275 aa13.08□□□□□ -0.32
RNF130-208ENST00000523487 C1orf141Q5JVX7 400 aa13.08□□□□□ -0.32
RNF130-208ENST00000523487 RC3H1Q5TC82 1133 aaKnown RBP13.08□□□□□ -0.32
RNF130-208ENST00000523487 NLGN1Q8N2Q7 840 aa13.08□□□□□ -0.32
RNF130-208ENST00000523487 RBM42Q9BTD8 480 aaKnown RBP13.08□□□□□ -0.32
RNF130-208ENST00000523487 RTCBQ9Y3I0 505 aaKnown RBP13.08□□□□□ -0.32
RNF130-208ENST00000523487 ITPK1Q13572 414 aa13.07□□□□□ -0.32
RNF130-208ENST00000523487 ZNF530Q6P9A1 599 aaPredicted RBP13.07□□□□□ -0.32
RNF130-208ENST00000523487 PKD1L3Q7Z443 1732 aa13.07□□□□□ -0.32
RNF130-208ENST00000523487 GIGYF1O75420 1035 aaPredicted RBP13.06□□□□□ -0.32
RNF130-208ENST00000523487 AMIGO3Q86WK7 504 aa13.06□□□□□ -0.32
RNF130-208ENST00000523487 TUBGCP6Q96RT7 1819 aa13.06□□□□□ -0.32
RNF130-208ENST00000523487 C5P01031 1676 aa13.05□□□□□ -0.32
RNF130-208ENST00000523487 ITGB4P16144 1822 aa13.05□□□□□ -0.32
RNF130-208ENST00000523487 SULT6B1Q6IMI4 303 aa13.05□□□□□ -0.32
RNF130-208ENST00000523487 SMIM5Q71RC9 77 aa13.05□□□□□ -0.32
RNF130-208ENST00000523487 C4BP0C0L5 1744 aa13.05□□□□□ -0.32
RNF130-208ENST00000523487 ANKRD26Q9UPS8 1709 aa13.05□□□□□ -0.32
RNF130-208ENST00000523487 RPS6KA4O75676 772 aa13.04□□□□□ -0.32
RNF130-208ENST00000523487 IL13P35225 146 aa13.04□□□□□ -0.32
RNF130-208ENST00000523487 RFC4P35249 363 aa13.04□□□□□ -0.32
RNF130-208ENST00000523487 NFATC2IPQ8NCF5 419 aa13.04□□□□□ -0.32
RNF130-208ENST00000523487 TGFB2P61812 414 aa13.03□□□□□ -0.32
RNF130-208ENST00000523487 ARHGEF1Q92888 912 aaKnown RBP13.03□□□□□ -0.32
RNF130-208ENST00000523487 TAF1LQ8IZX4 1826 aa13.03□□□□□ -0.32
RNF130-208ENST00000523487 SENP3-EIF4A1A0A087X0R7 540 aa13.02□□□□□ -0.33
RNF130-208ENST00000523487 MMP10P09238 476 aa13.02□□□□□ -0.33
RNF130-208ENST00000523487 AKAP4Q5JQC9 854 aa13.02□□□□□ -0.33
RNF130-208ENST00000523487 AMER1Q5JTC6 1135 aaPredicted RBP13.02□□□□□ -0.33
RNF130-208ENST00000523487 SLC4A9Q96Q91 983 aa13.02□□□□□ -0.33
RNF130-208ENST00000523487 CNTNAP4Q9C0A0 1308 aa13.02□□□□□ -0.33
RNF130-208ENST00000523487 TOGARAM1Q9Y4F4 1720 aa13.02□□□□□ -0.33
RNF130-208ENST00000523487 PTCD1O75127 700 aaKnown RBP13.01□□□□□ -0.33
RNF130-208ENST00000523487 AEBP1Q8IUX7 1158 aa13.01□□□□□ -0.33
RNF130-208ENST00000523487 PARP3Q9Y6F1 533 aa13.01□□□□□ -0.33
RNF130-208ENST00000523487 GPBP1L1Q9HC44 474 aaPredicted RBP13□□□□□ -0.33
RNF130-208ENST00000523487 CCDC87Q9NVE4 849 aa13□□□□□ -0.33
RNF130-208ENST00000523487 KDRP35968 1356 aa12.99□□□□□ -0.33
RNF130-208ENST00000523487 PER1O15534 1290 aaPredicted RBP12.99□□□□□ -0.33
RNF130-208ENST00000523487 GYS1P13807 737 aa12.99□□□□□ -0.33
RNF130-208ENST00000523487 UBR3Q6ZT12 1888 aa12.98□□□□□ -0.33
RNF130-208ENST00000523487 KIF7Q2M1P5 1343 aa12.98□□□□□ -0.33
RNF130-208ENST00000523487 DIAPH1O60610 1272 aaKnown RBP12.98□□□□□ -0.33
RNF130-208ENST00000523487 CRKLP46109 303 aaKnown RBP12.98□□□□□ -0.33
RNF130-208ENST00000523487 SLC52A2Q9HAB3 445 aa12.98□□□□□ -0.33
RNF130-208ENST00000523487 KDM6AO15550 1401 aaPredicted RBP12.96□□□□□ -0.33
RNF130-208ENST00000523487 A0A0G2JLW4 131 aa12.96□□□□□ -0.33
RNF130-208ENST00000523487 RNMTO43148 476 aaKnown RBP12.96□□□□□ -0.33
RNF130-208ENST00000523487 PPP4R3CPQ6ZMV5 832 aa12.96□□□□□ -0.33
RNF130-208ENST00000523487 LGR6Q9HBX8 967 aa12.96□□□□□ -0.33
RNF130-208ENST00000523487 ZPR1O75312 459 aa12.95□□□□□ -0.34
RNF130-208ENST00000523487 HMOX1P09601 288 aa12.95□□□□□ -0.34
RNF130-208ENST00000523487 CC2D1BQ5T0F9 858 aaKnown RBP12.95□□□□□ -0.34
RNF130-208ENST00000523487 WWC3Q9ULE0 1092 aa12.95□□□□□ -0.34
RNF130-208ENST00000523487 BCS1LQ9Y276 419 aa12.95□□□□□ -0.34
RNF130-208ENST00000523487 ZNF831Q5JPB2 1677 aa12.95□□□□□ -0.34
RNF130-208ENST00000523487 ATP10DQ9P241 1426 aa12.95□□□□□ -0.34
RNF130-208ENST00000523487 INTS5Q6P9B9 1019 aaKnown RBP12.94□□□□□ -0.34
RNF130-208ENST00000523487 ARHGAP27Q6ZUM4 889 aa12.94□□□□□ -0.34
RNF130-208ENST00000523487 VSIG10Q8N0Z9 540 aa12.94□□□□□ -0.34
RNF130-208ENST00000523487 PIM2Q9P1W9 311 aa12.94□□□□□ -0.34
RNF130-208ENST00000523487 FCHSD2O94868 740 aa12.93□□□□□ -0.34
RNF130-208ENST00000523487 DPEP1P16444 411 aa12.93□□□□□ -0.34
RNF130-208ENST00000523487 MTHFSDQ2M296 383 aaKnown RBP12.93□□□□□ -0.34
RNF130-208ENST00000523487 USP42Q9H9J4 1324 aaKnown RBP12.92□□□□□ -0.34
RNF130-208ENST00000523487 CYP19A1P11511 503 aaPredicted RBP12.92□□□□□ -0.34
RNF130-208ENST00000523487 TM4SF1P30408 202 aa12.92□□□□□ -0.34
RNF130-208ENST00000523487 FKBP8Q14318 412 aa12.92□□□□□ -0.34
RNF130-208ENST00000523487 DNAJC10Q8IXB1 793 aa12.92□□□□□ -0.34
RNF130-208ENST00000523487 ZNF526Q8TF50 670 aaPredicted RBP12.92□□□□□ -0.34
RNF130-208ENST00000523487 SRP68Q9UHB9 627 aaKnown RBP12.92□□□□□ -0.34
RNF130-208ENST00000523487 ADCY9O60503 1353 aa12.92□□□□□ -0.34
RNF130-208ENST00000523487 NPC1L1Q9UHC9 1359 aa12.92□□□□□ -0.34
RNF130-208ENST00000523487 STARD3NLO95772 234 aa12.91□□□□□ -0.34
RNF130-208ENST00000523487 KCNA3P22001 575 aa12.91□□□□□ -0.34
RNF130-208ENST00000523487 SLC39A6Q13433 755 aa12.91□□□□□ -0.34
RNF130-208ENST00000523487 TTC5Q8N0Z6 440 aa12.91□□□□□ -0.34
RNF130-208ENST00000523487 TEX13AQ9BXU3 409 aaPredicted RBP12.91□□□□□ -0.34
RNF130-208ENST00000523487 CEP350Q5VT06 3117 aa12.91□□□□□ -0.34
RNF130-208ENST00000523487 U2SURPO15042 1029 aaKnown RBP12.9□□□□□ -0.34
RNF130-208ENST00000523487 DALRD3Q5D0E6 543 aaKnown RBP12.9□□□□□ -0.34
RNF130-208ENST00000523487 USPL1Q5W0Q7 1092 aa12.9□□□□□ -0.34
RNF130-208ENST00000523487 GAS2L2Q8NHY3 880 aa12.9□□□□□ -0.34
RNF130-208ENST00000523487 NARFQ9UHQ1 456 aa12.9□□□□□ -0.34
RNF130-208ENST00000523487 PXDNLA1KZ92 1463 aa12.9□□□□□ -0.34
RNF130-208ENST00000523487 C10orf71Q711Q0 1435 aa12.89□□□□□ -0.35
RNF130-208ENST00000523487 A0A087WZG4 1122 aa12.89□□□□□ -0.35
RNF130-208ENST00000523487 GNAT3A8MTJ3 354 aa12.89□□□□□ -0.35
RNF130-208ENST00000523487 POLRMTO00411 1230 aaKnown RBP12.89□□□□□ -0.35
RNF130-208ENST00000523487 HOXD11P31277 338 aaPredicted RBP12.89□□□□□ -0.35
RNF130-208ENST00000523487 TEFQ10587 303 aa12.89□□□□□ -0.35
RNF130-208ENST00000523487 CFAP53Q96M91 514 aa12.89□□□□□ -0.35
RNF130-208ENST00000523487 RNF39Q9H2S5 420 aa12.89□□□□□ -0.35
RNF130-208ENST00000523487 CICQ96RK0 1608 aaPredicted RBP12.88□□□□□ -0.35
RNF130-208ENST00000523487 HSPA6P17066 643 aa12.88□□□□□ -0.35
RNF130-208ENST00000523487 NUDCQ9Y266 331 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms