RNA–Protein interactions for RNA: ENST00000523469.5

CPNE3-206, Transcript of copine 3, humanhuman

TSL 5

Gene CPNE3, Length 656 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-206ENST00000523469 INSM2Q96T92 566 aaPredicted RBP11.38□□□□□ -0.59
CPNE3-206ENST00000523469 BACH1O14867 736 aa11.37□□□□□ -0.59
CPNE3-206ENST00000523469 DPYDQ12882 1025 aa11.37□□□□□ -0.59
CPNE3-206ENST00000523469 NOVA2Q9UNW9 492 aaKnown RBP11.37□□□□□ -0.59
CPNE3-206ENST00000523469 SEC13P55735 322 aa11.36□□□□□ -0.59
CPNE3-206ENST00000523469 SERBP1Q8NC51 408 aaKnown RBP eCLIP11.36□□□□□ -0.59
CPNE3-206ENST00000523469 POLMQ9NP87 494 aaPredicted RBP11.36□□□□□ -0.59
CPNE3-206ENST00000523469 ZNF358Q9NW07 568 aa11.36□□□□□ -0.59
CPNE3-206ENST00000523469 HRH3Q9Y5N1 445 aa11.36□□□□□ -0.59
CPNE3-206ENST00000523469 M0R2N6 131 aa11.35□□□□□ -0.59
CPNE3-206ENST00000523469 GPC1P35052 558 aa11.35□□□□□ -0.59
CPNE3-206ENST00000523469 CTSOP43234 321 aaPredicted RBP11.35□□□□□ -0.59
CPNE3-206ENST00000523469 FAM200AQ8TCP9 573 aa11.35□□□□□ -0.59
CPNE3-206ENST00000523469 SLC4A9Q96Q91 983 aa11.35□□□□□ -0.59
CPNE3-206ENST00000523469 ARXQ96QS3 562 aa11.35□□□□□ -0.59
CPNE3-206ENST00000523469 SENP2Q9HC62 589 aa11.35□□□□□ -0.59
CPNE3-206ENST00000523469 RNF144AP50876 292 aaPredicted RBP11.34□□□□□ -0.59
CPNE3-206ENST00000523469 SERTAD1Q9UHV2 236 aa11.34□□□□□ -0.59
CPNE3-206ENST00000523469 ZMIZ1Q9ULJ6 1067 aa11.34□□□□□ -0.59
CPNE3-206ENST00000523469 SOS2Q07890 1332 aaPredicted RBP11.34□□□□□ -0.59
CPNE3-206ENST00000523469 TTLL8A6PVC2 850 aa11.33□□□□□ -0.6
CPNE3-206ENST00000523469 SFI1A8K8P3 1242 aa11.33□□□□□ -0.6
CPNE3-206ENST00000523469 CENPCQ03188 943 aa11.33□□□□□ -0.6
CPNE3-206ENST00000523469 KIFC2Q96AC6 838 aa11.33□□□□□ -0.6
CPNE3-206ENST00000523469 SMTNP53814 917 aa11.32□□□□□ -0.6
CPNE3-206ENST00000523469 TLR1Q15399 786 aa11.32□□□□□ -0.6
CPNE3-206ENST00000523469 FOXD4L5Q5VV16 416 aaPredicted RBP11.32□□□□□ -0.6
CPNE3-206ENST00000523469 STK32AQ8WU08 396 aa11.31□□□□□ -0.6
CPNE3-206ENST00000523469 FHDC1Q9C0D6 1143 aaPredicted RBP11.31□□□□□ -0.6
CPNE3-206ENST00000523469 GRIP2Q9C0E4 1043 aa11.31□□□□□ -0.6
CPNE3-206ENST00000523469 GMPR2Q9P2T1 348 aaKnown RBP11.31□□□□□ -0.6
CPNE3-206ENST00000523469 CSB-PGBD3P0DP91 1061 aa11.3□□□□□ -0.6
CPNE3-206ENST00000523469 MTFR1Q15390 333 aa11.3□□□□□ -0.6
CPNE3-206ENST00000523469 SLC27A3Q5K4L6 730 aa11.3□□□□□ -0.6
CPNE3-206ENST00000523469 RNF217Q8TC41 542 aa11.3□□□□□ -0.6
CPNE3-206ENST00000523469 TRIM47Q96LD4 638 aa11.3□□□□□ -0.6
CPNE3-206ENST00000523469 A6NJY4 79 aa11.29□□□□□ -0.6
CPNE3-206ENST00000523469 ZSCAN10Q96SZ4 725 aaPredicted RBP11.29□□□□□ -0.6
CPNE3-206ENST00000523469 GTF2E1P29083 439 aaPredicted RBP11.28□□□□□ -0.6
CPNE3-206ENST00000523469 SWI5Q1ZZU3 235 aa11.28□□□□□ -0.6
CPNE3-206ENST00000523469 TMEM164Q5U3C3 297 aa11.28□□□□□ -0.6
CPNE3-206ENST00000523469 TSEN2Q8NCE0 465 aaKnown RBP11.28□□□□□ -0.6
CPNE3-206ENST00000523469 CDK2AP1O14519 115 aa11.27□□□□□ -0.61
CPNE3-206ENST00000523469 MAN1A2O60476 641 aa11.27□□□□□ -0.61
CPNE3-206ENST00000523469 EPHA4P54764 986 aa11.27□□□□□ -0.61
CPNE3-206ENST00000523469 LYSMD3Q7Z3D4 306 aa11.27□□□□□ -0.61
CPNE3-206ENST00000523469 TNS4Q8IZW8 715 aa11.27□□□□□ -0.61
CPNE3-206ENST00000523469 FIGNL2A6NMB9 653 aa11.26□□□□□ -0.61
CPNE3-206ENST00000523469 TMEM214Q6NUQ4 689 aaKnown RBP11.26□□□□□ -0.61
CPNE3-206ENST00000523469 PPARGC1BQ86YN6 1023 aaKnown RBP11.26□□□□□ -0.61
CPNE3-206ENST00000523469 NBPF15Q8N660 670 aa11.26□□□□□ -0.61
CPNE3-206ENST00000523469 HINFPQ9BQA5 517 aa11.26□□□□□ -0.61
CPNE3-206ENST00000523469 SCHIP1Q9P0W5 487 aaPredicted RBP11.26□□□□□ -0.61
CPNE3-206ENST00000523469 DNMT3LQ9UJW3 386 aa11.26□□□□□ -0.61
CPNE3-206ENST00000523469 C11orf95C9JLR9 678 aaPredicted RBP11.25□□□□□ -0.61
CPNE3-206ENST00000523469 ZNF800Q2TB10 664 aaPredicted RBP eCLIP11.25□□□□□ -0.61
CPNE3-206ENST00000523469 SPATA31C2B4DYI2 1134 aa11.24□□□□□ -0.61
CPNE3-206ENST00000523469 FOXK2Q01167 660 aa11.24□□□□□ -0.61
CPNE3-206ENST00000523469 FAM69CQ0P6D2 419 aa11.24□□□□□ -0.61
CPNE3-206ENST00000523469 GNASQ5JWF2 1037 aa11.24□□□□□ -0.61
CPNE3-206ENST00000523469 PRICKLE2Q7Z3G6 844 aa11.24□□□□□ -0.61
CPNE3-206ENST00000523469 IQSEC3Q9UPP2 1182 aaPredicted RBP11.24□□□□□ -0.61
CPNE3-206ENST00000523469 USTQ9Y2C2 406 aa11.24□□□□□ -0.61
CPNE3-206ENST00000523469 SNRPBP14678 240 aaKnown RBP11.23□□□□□ -0.61
CPNE3-206ENST00000523469 RETREG2Q8NC44 543 aa11.23□□□□□ -0.61
CPNE3-206ENST00000523469 RHBDD1Q8TEB9 315 aa11.23□□□□□ -0.61
CPNE3-206ENST00000523469 TMEM88BA6NKF7 163 aa11.22□□□□□ -0.61
CPNE3-206ENST00000523469 PDE4CQ08493 712 aa11.22□□□□□ -0.61
CPNE3-206ENST00000523469 WDR44Q5JSH3 913 aa11.22□□□□□ -0.61
CPNE3-206ENST00000523469 SLC9A9Q8IVB4 645 aa11.22□□□□□ -0.61
CPNE3-206ENST00000523469 TSPAN10Q9H1Z9 355 aaPredicted RBP11.22□□□□□ -0.61
CPNE3-206ENST00000523469 POTECB2RU33 542 aa11.21□□□□□ -0.61
CPNE3-206ENST00000523469 POU4F2Q12837 409 aa11.21□□□□□ -0.61
CPNE3-206ENST00000523469 NBPF10Q6P3W6 841 aaKnown RBP11.21□□□□□ -0.61
CPNE3-206ENST00000523469 TAS1R3Q7RTX0 852 aa11.21□□□□□ -0.61
CPNE3-206ENST00000523469 GAS2L2Q8NHY3 880 aa11.21□□□□□ -0.61
CPNE3-206ENST00000523469 CLP1Q92989 425 aaKnown RBP11.21□□□□□ -0.61
CPNE3-206ENST00000523469 NIFKQ9BYG3 293 aaKnown RBP11.21□□□□□ -0.61
CPNE3-206ENST00000523469 SOBPA7XYQ1 873 aa11.2□□□□□ -0.62
CPNE3-206ENST00000523469 USP3Q9Y6I4 520 aa11.2□□□□□ -0.62
CPNE3-206ENST00000523469 IGFBP4P22692 258 aa11.19□□□□□ -0.62
CPNE3-206ENST00000523469 C4orf17Q53FE4 359 aa11.19□□□□□ -0.62
CPNE3-206ENST00000523469 ZNF295-AS1Q8N0V1 137 aa11.19□□□□□ -0.62
CPNE3-206ENST00000523469 SCG3Q8WXD2 468 aaKnown RBP11.19□□□□□ -0.62
CPNE3-206ENST00000523469 ATAD2Q6PL18 1390 aa11.18□□□□□ -0.62
CPNE3-206ENST00000523469 LGR5O75473 907 aa11.18□□□□□ -0.62
CPNE3-206ENST00000523469 RHOQP17081 205 aa11.18□□□□□ -0.62
CPNE3-206ENST00000523469 WEE1P30291 646 aa11.18□□□□□ -0.62
CPNE3-206ENST00000523469 PSMA6P60900 246 aaKnown RBP11.18□□□□□ -0.62
CPNE3-206ENST00000523469 TBCELQ5QJ74 424 aa11.18□□□□□ -0.62
CPNE3-206ENST00000523469 CABP1Q9NZU7 370 aa11.18□□□□□ -0.62
CPNE3-206ENST00000523469 C21orf2O43822 256 aa11.17□□□□□ -0.62
CPNE3-206ENST00000523469 TEAD4Q15561 434 aa11.17□□□□□ -0.62
CPNE3-206ENST00000523469 CHMP3Q9Y3E7 222 aa11.17□□□□□ -0.62
CPNE3-206ENST00000523469 PPP1R12BO60237 982 aaPredicted RBP11.16□□□□□ -0.62
CPNE3-206ENST00000523469 PRMT3O60678 531 aa11.16□□□□□ -0.62
CPNE3-206ENST00000523469 ZNF787Q6DD87 383 aa11.16□□□□□ -0.62
CPNE3-206ENST00000523469 STAG2Q8N3U4 1231 aa11.16□□□□□ -0.62
CPNE3-206ENST00000523469 SERTM1A2A2V5 107 aa11.15□□□□□ -0.62
CPNE3-206ENST00000523469 PHKA2P46019 1235 aa11.15□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms