RNA–Protein interactions for RNA: ENST00000523387.5

CSMD1-212, Transcript of CUB and Sushi multiple domains 1, humanhuman

TSL 2

Gene CSMD1, Length 3,989 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-212ENST00000523387 ANAPC15P60006 121 aa10.76□□□□□ -0.69
CSMD1-212ENST00000523387 CCDC186Q7Z3E2 898 aa10.76□□□□□ -0.69
CSMD1-212ENST00000523387 JAKMIP1Q96N16 626 aaKnown RBP10.76□□□□□ -0.69
CSMD1-212ENST00000523387 POLKQ9UBT6 870 aa10.76□□□□□ -0.69
CSMD1-212ENST00000523387 PTGS1P23219 599 aa10.76□□□□□ -0.69
CSMD1-212ENST00000523387 ABCA8O94911 1581 aa10.76□□□□□ -0.69
CSMD1-212ENST00000523387 UTP14CQ5TAP6 766 aaKnown RBP10.75□□□□□ -0.69
CSMD1-212ENST00000523387 NME9Q86XW9 330 aa10.75□□□□□ -0.69
CSMD1-212ENST00000523387 EIF2AK3Q9NZJ5 1116 aaKnown RBP10.75□□□□□ -0.69
CSMD1-212ENST00000523387 PUS7Q96PZ0 661 aaKnown RBP10.75□□□□□ -0.69
CSMD1-212ENST00000523387 PDRG1Q9NUG6 133 aa10.75□□□□□ -0.69
CSMD1-212ENST00000523387 CYP46A1Q9Y6A2 500 aa10.75□□□□□ -0.69
CSMD1-212ENST00000523387 MADDQ8WXG6 1647 aa10.75□□□□□ -0.69
CSMD1-212ENST00000523387 IQGAP3Q86VI3 1631 aa10.75□□□□□ -0.69
CSMD1-212ENST00000523387 DNM1Q05193 864 aaKnown RBP10.75□□□□□ -0.69
CSMD1-212ENST00000523387 FILIP1Q7Z7B0 1213 aa10.75□□□□□ -0.69
CSMD1-212ENST00000523387 PRDM4Q9UKN5 801 aa10.75□□□□□ -0.69
CSMD1-212ENST00000523387 PDCP20941 246 aa10.75□□□□□ -0.69
CSMD1-212ENST00000523387 FOSBP53539 338 aa10.75□□□□□ -0.69
CSMD1-212ENST00000523387 HOMER1Q86YM7 354 aa10.75□□□□□ -0.69
CSMD1-212ENST00000523387 PALD1Q9ULE6 856 aa10.75□□□□□ -0.69
CSMD1-212ENST00000523387 DTNBO60941 627 aa10.74□□□□□ -0.69
CSMD1-212ENST00000523387 EIF2S2P20042 333 aaKnown RBP10.74□□□□□ -0.69
CSMD1-212ENST00000523387 CD109Q6YHK3 1445 aa10.74□□□□□ -0.69
CSMD1-212ENST00000523387 PTPRCP08575 1304 aa10.74□□□□□ -0.69
CSMD1-212ENST00000523387 UNC13BO14795 1591 aa10.74□□□□□ -0.69
CSMD1-212ENST00000523387 F13A1P00488 732 aa10.74□□□□□ -0.69
CSMD1-212ENST00000523387 GJB2P29033 226 aa10.74□□□□□ -0.69
CSMD1-212ENST00000523387 SPATA32Q96LK8 384 aa10.74□□□□□ -0.69
CSMD1-212ENST00000523387 IFIT2P09913 472 aaKnown RBP10.74□□□□□ -0.69
CSMD1-212ENST00000523387 CHMLP26374 656 aa10.74□□□□□ -0.69
CSMD1-212ENST00000523387 CEBPZQ03701 1054 aaKnown RBP10.74□□□□□ -0.69
CSMD1-212ENST00000523387 TRPM2O94759 1503 aa10.73□□□□□ -0.69
CSMD1-212ENST00000523387 AMPHP49418 695 aa10.73□□□□□ -0.69
CSMD1-212ENST00000523387 FAM200AQ8TCP9 573 aa10.73□□□□□ -0.69
CSMD1-212ENST00000523387 CLIP2Q9UDT6 1046 aa10.73□□□□□ -0.69
CSMD1-212ENST00000523387 SPG7Q9UQ90 795 aa10.73□□□□□ -0.69
CSMD1-212ENST00000523387 MSH6P52701 1360 aa10.73□□□□□ -0.69
CSMD1-212ENST00000523387 VIRMAQ69YN4 1812 aaKnown RBP10.73□□□□□ -0.69
CSMD1-212ENST00000523387 SYT1P21579 422 aa10.73□□□□□ -0.69
CSMD1-212ENST00000523387 PTPN14Q15678 1187 aa10.73□□□□□ -0.69
CSMD1-212ENST00000523387 FEZ1Q99689 392 aa10.73□□□□□ -0.69
CSMD1-212ENST00000523387 IQSEC2Q5JU85 1478 aa10.73□□□□□ -0.69
CSMD1-212ENST00000523387 TPM4P67936 248 aa10.73□□□□□ -0.69
CSMD1-212ENST00000523387 STK3Q13188 491 aa10.73□□□□□ -0.69
CSMD1-212ENST00000523387 GORABQ5T7V8 394 aa10.73□□□□□ -0.69
CSMD1-212ENST00000523387 MYO5CQ9NQX4 1742 aa10.73□□□□□ -0.69
CSMD1-212ENST00000523387 UGGT1Q9NYU2 1555 aa10.72□□□□□ -0.69
CSMD1-212ENST00000523387 CCDC30Q5VVM6 783 aa10.72□□□□□ -0.69
CSMD1-212ENST00000523387 CCDC73Q6ZRK6 1079 aa10.72□□□□□ -0.69
CSMD1-212ENST00000523387 ZSCAN31Q96LW9 406 aaPredicted RBP10.72□□□□□ -0.69
CSMD1-212ENST00000523387 OGFRQ9NZT2 677 aa10.72□□□□□ -0.69
CSMD1-212ENST00000523387 TFIP11Q9UBB9 837 aaKnown RBP10.72□□□□□ -0.69
CSMD1-212ENST00000523387 NOL12Q9UGY1 213 aaKnown RBP eCLIP10.72□□□□□ -0.69
CSMD1-212ENST00000523387 PYCARDQ9ULZ3 195 aa10.72□□□□□ -0.69
CSMD1-212ENST00000523387 LRRFIP2Q9Y608 721 aaKnown RBP10.72□□□□□ -0.69
CSMD1-212ENST00000523387 V9GYY5 206 aaPredicted RBP10.72□□□□□ -0.69
CSMD1-212ENST00000523387 ADGRL1O94910 1474 aa10.72□□□□□ -0.69
CSMD1-212ENST00000523387 BRPF1P55201 1214 aaPredicted RBP10.72□□□□□ -0.69
CSMD1-212ENST00000523387 ATP2B3Q16720 1220 aa10.72□□□□□ -0.69
CSMD1-212ENST00000523387 TEX35Q5T0J7 233 aa10.72□□□□□ -0.69
CSMD1-212ENST00000523387 PRPF40BQ6NWY9 871 aaKnown RBP10.72□□□□□ -0.69
CSMD1-212ENST00000523387 LTV1Q96GA3 475 aaPredicted RBP10.72□□□□□ -0.69
CSMD1-212ENST00000523387 TRMT1Q9NXH9 659 aaKnown RBP10.72□□□□□ -0.69
CSMD1-212ENST00000523387 RNF20Q5VTR2 975 aa10.72□□□□□ -0.69
CSMD1-212ENST00000523387 WAPLQ7Z5K2 1190 aa10.72□□□□□ -0.69
CSMD1-212ENST00000523387 LUZP1Q86V48 1076 aa10.72□□□□□ -0.69
CSMD1-212ENST00000523387 TRERF1Q96PN7 1200 aa10.72□□□□□ -0.69
CSMD1-212ENST00000523387 AK2P54819 239 aa10.71□□□□□ -0.69
CSMD1-212ENST00000523387 GNL2Q13823 731 aaKnown RBP10.71□□□□□ -0.69
CSMD1-212ENST00000523387 SF3A1Q15459 793 aaKnown RBP10.71□□□□□ -0.69
CSMD1-212ENST00000523387 CLASRPQ8N2M8 674 aaKnown RBP10.71□□□□□ -0.69
CSMD1-212ENST00000523387 PREX2Q70Z35 1606 aa10.71□□□□□ -0.69
CSMD1-212ENST00000523387 ZNF165P49910 485 aa10.71□□□□□ -0.69
CSMD1-212ENST00000523387 MNS1Q8NEH6 495 aa10.71□□□□□ -0.69
CSMD1-212ENST00000523387 SRGAP3O43295 1099 aa10.71□□□□□ -0.7
CSMD1-212ENST00000523387 MLECQ14165 292 aa10.71□□□□□ -0.7
CSMD1-212ENST00000523387 ANO6Q4KMQ2 910 aa10.71□□□□□ -0.7
CSMD1-212ENST00000523387 CEP135Q66GS9 1140 aa10.71□□□□□ -0.7
CSMD1-212ENST00000523387 KRT222Q8N1A0 295 aa10.71□□□□□ -0.7
CSMD1-212ENST00000523387 PAXBP1Q9Y5B6 917 aa10.71□□□□□ -0.7
CSMD1-212ENST00000523387 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP10.71□□□□□ -0.7
CSMD1-212ENST00000523387 CPA1P15085 419 aa10.7□□□□□ -0.7
CSMD1-212ENST00000523387 TYRO3Q06418 890 aa10.7□□□□□ -0.7
CSMD1-212ENST00000523387 IDI1Q13907 227 aa10.7□□□□□ -0.7
CSMD1-212ENST00000523387 HSP90AB4PQ58FF6 505 aa10.7□□□□□ -0.7
CSMD1-212ENST00000523387 ARGLU1Q9NWB6 273 aaPredicted RBP10.7□□□□□ -0.7
CSMD1-212ENST00000523387 SMTNL1A8MU46 457 aa10.7□□□□□ -0.7
CSMD1-212ENST00000523387 PSMA5P28066 241 aa10.7□□□□□ -0.7
CSMD1-212ENST00000523387 NECAB1Q8N987 351 aa10.7□□□□□ -0.7
CSMD1-212ENST00000523387 CUL4AQ13619 759 aa10.7□□□□□ -0.7
CSMD1-212ENST00000523387 CCAR2Q8N163 923 aaKnown RBP10.7□□□□□ -0.7
CSMD1-212ENST00000523387 ZRANB1Q9UGI0 708 aa10.7□□□□□ -0.7
CSMD1-212ENST00000523387 PPP6R1Q9UPN7 881 aa10.7□□□□□ -0.7
CSMD1-212ENST00000523387 AK9Q5TCS8 1911 aa10.7□□□□□ -0.7
CSMD1-212ENST00000523387 ZSCAN20P17040 1043 aaPredicted RBP10.69□□□□□ -0.7
CSMD1-212ENST00000523387 PLPPR3Q6T4P5 718 aa10.69□□□□□ -0.7
CSMD1-212ENST00000523387 SH2B1Q9NRF2 756 aaPredicted RBP10.69□□□□□ -0.7
CSMD1-212ENST00000523387 DACT1Q9NYF0 836 aa10.69□□□□□ -0.7
CSMD1-212ENST00000523387 KIAA1524Q8TCG1 905 aa10.69□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms