RNA–Protein interactions for RNA: ENST00000523068.1

PVT1-216, Transcript of Pvt1 oncogene, humanhuman

TSL 5 BASIC

Gene PVT1, Length 844 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-216ENST00000523068 AK7Q96M32 723 aa14.74□□□□□ -0.05
PVT1-216ENST00000523068 ASAP1Q9ULH1 1129 aa14.74□□□□□ -0.05
PVT1-216ENST00000523068 DIAPH1O60610 1272 aaKnown RBP14.73□□□□□ -0.05
PVT1-216ENST00000523068 ATP6V1AP38606 617 aa14.72□□□□□ -0.05
PVT1-216ENST00000523068 CABP4P57796 275 aa14.72□□□□□ -0.05
PVT1-216ENST00000523068 ATG3Q9NT62 314 aa14.72□□□□□ -0.05
PVT1-216ENST00000523068 KDM6AO15550 1401 aaPredicted RBP14.72□□□□□ -0.05
PVT1-216ENST00000523068 COL5A3P25940 1745 aaPredicted RBP14.71□□□□□ -0.05
PVT1-216ENST00000523068 CHD4Q14839 1912 aa14.7□□□□□ -0.06
PVT1-216ENST00000523068 SSFA2P28290 1259 aa14.7□□□□□ -0.06
PVT1-216ENST00000523068 CNGB1Q14028 1251 aaPredicted RBP14.7□□□□□ -0.06
PVT1-216ENST00000523068 AKAP4Q5JQC9 854 aa14.7□□□□□ -0.06
PVT1-216ENST00000523068 HMOX1P09601 288 aa14.69□□□□□ -0.06
PVT1-216ENST00000523068 KLHL34Q8N239 644 aa14.69□□□□□ -0.06
PVT1-216ENST00000523068 LINC00116Q8NCU8 138 aa14.69□□□□□ -0.06
PVT1-216ENST00000523068 YY1P25490 414 aa14.68□□□□□ -0.06
PVT1-216ENST00000523068 ITPK1Q13572 414 aa14.68□□□□□ -0.06
PVT1-216ENST00000523068 RBM42Q9BTD8 480 aaKnown RBP14.68□□□□□ -0.06
PVT1-216ENST00000523068 COL3A1P02461 1466 aaPredicted RBP14.68□□□□□ -0.06
PVT1-216ENST00000523068 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP14.67□□□□□ -0.06
PVT1-216ENST00000523068 GNPATO15228 680 aa14.67□□□□□ -0.06
PVT1-216ENST00000523068 PHF14O94880 888 aa14.67□□□□□ -0.06
PVT1-216ENST00000523068 MSL1Q68DK7 614 aa14.67□□□□□ -0.06
PVT1-216ENST00000523068 NFATC2IPQ8NCF5 419 aa14.67□□□□□ -0.06
PVT1-216ENST00000523068 CICQ96RK0 1608 aaPredicted RBP14.66□□□□□ -0.06
PVT1-216ENST00000523068 ADAMTS7Q9UKP4 1686 aa14.66□□□□□ -0.06
PVT1-216ENST00000523068 CFAP53Q96M91 514 aa14.66□□□□□ -0.06
PVT1-216ENST00000523068 U2SURPO15042 1029 aaKnown RBP14.65□□□□□ -0.06
PVT1-216ENST00000523068 RC3H1Q5TC82 1133 aaKnown RBP14.65□□□□□ -0.06
PVT1-216ENST00000523068 RTCBQ9Y3I0 505 aaKnown RBP14.65□□□□□ -0.06
PVT1-216ENST00000523068 MRC1P22897 1456 aa14.64□□□□□ -0.07
PVT1-216ENST00000523068 MYH14Q7Z406 1995 aaKnown RBP14.64□□□□□ -0.07
PVT1-216ENST00000523068 GPR162Q16538 588 aa14.64□□□□□ -0.07
PVT1-216ENST00000523068 AMIGO3Q86WK7 504 aa14.64□□□□□ -0.07
PVT1-216ENST00000523068 SLC4A9Q96Q91 983 aa14.64□□□□□ -0.07
PVT1-216ENST00000523068 SLC52A2Q9HAB3 445 aa14.64□□□□□ -0.07
PVT1-216ENST00000523068 CNTNAP4Q9C0A0 1308 aa14.64□□□□□ -0.07
PVT1-216ENST00000523068 TJP1Q07157 1748 aa14.63□□□□□ -0.07
PVT1-216ENST00000523068 RNMTO43148 476 aaKnown RBP14.63□□□□□ -0.07
PVT1-216ENST00000523068 PTCD1O75127 700 aaKnown RBP14.63□□□□□ -0.07
PVT1-216ENST00000523068 MTHFSDQ2M296 383 aaKnown RBP14.63□□□□□ -0.07
PVT1-216ENST00000523068 TRAPPC3LQ5T215 181 aa14.63□□□□□ -0.07
PVT1-216ENST00000523068 PIAS4Q8N2W9 510 aaPredicted RBP14.63□□□□□ -0.07
PVT1-216ENST00000523068 CD2APQ9Y5K6 639 aa14.63□□□□□ -0.07
PVT1-216ENST00000523068 C4AP0C0L4 1744 aa14.62□□□□□ -0.07
PVT1-216ENST00000523068 LGR6Q9HBX8 967 aa14.62□□□□□ -0.07
PVT1-216ENST00000523068 NUDCQ9Y266 331 aa14.62□□□□□ -0.07
PVT1-216ENST00000523068 SMIM5Q71RC9 77 aa14.61□□□□□ -0.07
PVT1-216ENST00000523068 NLGN2Q8NFZ4 835 aa14.61□□□□□ -0.07
PVT1-216ENST00000523068 GAS2L2Q8NHY3 880 aa14.61□□□□□ -0.07
PVT1-216ENST00000523068 UTRNP46939 3433 aa14.6□□□□□ -0.07
PVT1-216ENST00000523068 RPS6KA4O75676 772 aa14.6□□□□□ -0.07
PVT1-216ENST00000523068 PPP2R1AP30153 589 aa14.6□□□□□ -0.07
PVT1-216ENST00000523068 PELP1Q8IZL8 1130 aaKnown RBP14.6□□□□□ -0.07
PVT1-216ENST00000523068 SIPA1L3O60292 1781 aaPredicted RBP14.6□□□□□ -0.07
PVT1-216ENST00000523068 UBR2Q8IWV8 1755 aa14.6□□□□□ -0.07
PVT1-216ENST00000523068 GNAT3A8MTJ3 354 aa14.59□□□□□ -0.07
PVT1-216ENST00000523068 RFC4P35249 363 aa14.59□□□□□ -0.07
PVT1-216ENST00000523068 CRKLP46109 303 aaKnown RBP14.58□□□□□ -0.08
PVT1-216ENST00000523068 NLGN1Q8N2Q7 840 aa14.58□□□□□ -0.08
PVT1-216ENST00000523068 ARHGEF1Q92888 912 aaKnown RBP14.58□□□□□ -0.08
PVT1-216ENST00000523068 KIF13BQ9NQT8 1826 aa14.57□□□□□ -0.08
PVT1-216ENST00000523068 KCPQ6ZWJ8 1503 aa14.57□□□□□ -0.08
PVT1-216ENST00000523068 GRIN3BO60391 1043 aa14.57□□□□□ -0.08
PVT1-216ENST00000523068 RSPH6AQ9H0K4 717 aa14.57□□□□□ -0.08
PVT1-216ENST00000523068 MMP10P09238 476 aa14.56□□□□□ -0.08
PVT1-216ENST00000523068 U2AF1L5P0DN76 240 aaPredicted RBP14.56□□□□□ -0.08
PVT1-216ENST00000523068 PRKAR2BP31323 418 aa14.56□□□□□ -0.08
PVT1-216ENST00000523068 U2AF1Q01081 240 aaKnown RBP eCLIP14.56□□□□□ -0.08
PVT1-216ENST00000523068 TEFQ10587 303 aa14.56□□□□□ -0.08
PVT1-216ENST00000523068 SLC39A6Q13433 755 aa14.56□□□□□ -0.08
PVT1-216ENST00000523068 TTC5Q8N0Z6 440 aa14.56□□□□□ -0.08
PVT1-216ENST00000523068 VSIG10Q8N0Z9 540 aa14.56□□□□□ -0.08
PVT1-216ENST00000523068 GOLGB1Q14789 3259 aaKnown RBP14.55□□□□□ -0.08
PVT1-216ENST00000523068 FCHSD2O94868 740 aa14.55□□□□□ -0.08
PVT1-216ENST00000523068 DNAJC10Q8IXB1 793 aa14.55□□□□□ -0.08
PVT1-216ENST00000523068 CCDC87Q9NVE4 849 aa14.55□□□□□ -0.08
PVT1-216ENST00000523068 GYS1P13807 737 aa14.54□□□□□ -0.08
PVT1-216ENST00000523068 INTS5Q6P9B9 1019 aaKnown RBP14.53□□□□□ -0.08
PVT1-216ENST00000523068 IL17REQ8NFR9 667 aa14.53□□□□□ -0.08
PVT1-216ENST00000523068 PHACTR3Q96KR7 559 aa14.53□□□□□ -0.08
PVT1-216ENST00000523068 PARP3Q9Y6F1 533 aa14.53□□□□□ -0.08
PVT1-216ENST00000523068 N4BP2Q86UW6 1770 aaPredicted RBP14.52□□□□□ -0.08
PVT1-216ENST00000523068 CEMIPQ8WUJ3 1361 aa14.52□□□□□ -0.08
PVT1-216ENST00000523068 USP42Q9H9J4 1324 aaKnown RBP14.52□□□□□ -0.08
PVT1-216ENST00000523068 NEFMP07197 916 aa14.52□□□□□ -0.09
PVT1-216ENST00000523068 CYP19A1P11511 503 aaPredicted RBP14.52□□□□□ -0.09
PVT1-216ENST00000523068 YBX3P16989 372 aaKnown RBP eCLIP14.52□□□□□ -0.09
PVT1-216ENST00000523068 ZNF790Q6PG37 636 aa14.52□□□□□ -0.09
PVT1-216ENST00000523068 RTF1Q92541 710 aaKnown RBP14.52□□□□□ -0.09
PVT1-216ENST00000523068 DLG5Q8TDM6 1919 aa14.51□□□□□ -0.09
PVT1-216ENST00000523068 SOS1Q07889 1333 aaPredicted RBP14.51□□□□□ -0.09
PVT1-216ENST00000523068 ZPR1O75312 459 aa14.51□□□□□ -0.09
PVT1-216ENST00000523068 STARD3NLO95772 234 aa14.51□□□□□ -0.09
PVT1-216ENST00000523068 TGFB2P61812 414 aa14.51□□□□□ -0.09
PVT1-216ENST00000523068 ZNF784Q8NCA9 323 aaPredicted RBP14.51□□□□□ -0.09
PVT1-216ENST00000523068 TEX13AQ9BXU3 409 aaPredicted RBP14.51□□□□□ -0.09
PVT1-216ENST00000523068 KIAA1551Q9HCM1 1747 aa14.51□□□□□ -0.09
PVT1-216ENST00000523068 C10orf71Q711Q0 1435 aa14.49□□□□□ -0.09
PVT1-216ENST00000523068 COL15A1P39059 1388 aa14.49□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms