RNA–Protein interactions for RNA: ENST00000523055.5

PCM1-218, Transcript of pericentriolar material 1, humanhuman

TSL 1 (best)

Gene PCM1, Length 1,426 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCM1-218ENST00000523055 PIGBQ92521 554 aa20.67■□□□□ 0.9
PCM1-218ENST00000523055 POLKQ9UBT6 870 aa20.67■□□□□ 0.9
PCM1-218ENST00000523055 KIF13BQ9NQT8 1826 aa20.65■□□□□ 0.9
PCM1-218ENST00000523055 SMARCC1Q92922 1105 aaPredicted RBP20.65■□□□□ 0.9
PCM1-218ENST00000523055 NMRK2Q9NPI5 230 aa20.65■□□□□ 0.9
PCM1-218ENST00000523055 COL13A1Q5TAT6 717 aaPredicted RBP20.64■□□□□ 0.89
PCM1-218ENST00000523055 KNSTRNQ9Y448 316 aa20.64■□□□□ 0.89
PCM1-218ENST00000523055 PKD1L3Q7Z443 1732 aa20.64■□□□□ 0.89
PCM1-218ENST00000523055 AMER1Q5JTC6 1135 aaPredicted RBP20.63■□□□□ 0.89
PCM1-218ENST00000523055 LOC102724428A0A0B4J2F2 783 aa20.62■□□□□ 0.89
PCM1-218ENST00000523055 SIK1P57059 783 aa20.62■□□□□ 0.89
PCM1-218ENST00000523055 ITPK1Q13572 414 aa20.62■□□□□ 0.89
PCM1-218ENST00000523055 WDR90Q96KV7 1748 aa20.62■□□□□ 0.89
PCM1-218ENST00000523055 HTRA3P83110 453 aa20.61■□□□□ 0.89
PCM1-218ENST00000523055 NKX1-1Q15270 411 aaPredicted RBP20.61■□□□□ 0.89
PCM1-218ENST00000523055 NCAPD2Q15021 1401 aa20.61■□□□□ 0.89
PCM1-218ENST00000523055 N4BP2Q86UW6 1770 aaPredicted RBP20.61■□□□□ 0.89
PCM1-218ENST00000523055 PER1O15534 1290 aaPredicted RBP20.61■□□□□ 0.89
PCM1-218ENST00000523055 MMP10P09238 476 aa20.61■□□□□ 0.89
PCM1-218ENST00000523055 MORC1Q86VD1 984 aa20.61■□□□□ 0.89
PCM1-218ENST00000523055 JMYQ8N9B5 988 aa20.61■□□□□ 0.89
PCM1-218ENST00000523055 A0A0G2JLW4 131 aa20.59■□□□□ 0.89
PCM1-218ENST00000523055 TGFB2P61812 414 aa20.59■□□□□ 0.89
PCM1-218ENST00000523055 BCS1LQ9Y276 419 aa20.59■□□□□ 0.89
PCM1-218ENST00000523055 C10orf71Q711Q0 1435 aa20.58■□□□□ 0.89
PCM1-218ENST00000523055 GNPATO15228 680 aa20.58■□□□□ 0.88
PCM1-218ENST00000523055 RBM46Q8TBY0 533 aaKnown RBP20.58■□□□□ 0.88
PCM1-218ENST00000523055 KLRG1Q96E93 195 aa20.58■□□□□ 0.88
PCM1-218ENST00000523055 ASAP1Q9ULH1 1129 aa20.58■□□□□ 0.88
PCM1-218ENST00000523055 EIF4A2Q14240 407 aaKnown RBP20.57■□□□□ 0.88
PCM1-218ENST00000523055 EYA1Q99502 592 aa20.57■□□□□ 0.88
PCM1-218ENST00000523055 BRCA1P38398 1863 aaKnown RBP20.56■□□□□ 0.88
PCM1-218ENST00000523055 CC2D1BQ5T0F9 858 aaKnown RBP20.56■□□□□ 0.88
PCM1-218ENST00000523055 CNGB1Q14028 1251 aaPredicted RBP20.55■□□□□ 0.88
PCM1-218ENST00000523055 DPEP1P16444 411 aa20.54■□□□□ 0.88
PCM1-218ENST00000523055 KCNA3P22001 575 aa20.54■□□□□ 0.88
PCM1-218ENST00000523055 ARHGAP27Q6ZUM4 889 aa20.54■□□□□ 0.88
PCM1-218ENST00000523055 ATP6V1AP38606 617 aa20.53■□□□□ 0.88
PCM1-218ENST00000523055 SLC4A9Q96Q91 983 aa20.53■□□□□ 0.88
PCM1-218ENST00000523055 ATG3Q9NT62 314 aa20.53■□□□□ 0.88
PCM1-218ENST00000523055 KDRP35968 1356 aa20.52■□□□□ 0.88
PCM1-218ENST00000523055 C9orf131Q5VYM1 1079 aa20.52■□□□□ 0.87
PCM1-218ENST00000523055 FCHSD2O94868 740 aa20.5■□□□□ 0.87
PCM1-218ENST00000523055 FSTL1Q12841 308 aa20.5■□□□□ 0.87
PCM1-218ENST00000523055 NLGN1Q8N2Q7 840 aa20.5■□□□□ 0.87
PCM1-218ENST00000523055 TMOD3Q9NYL9 352 aa20.5■□□□□ 0.87
PCM1-218ENST00000523055 C4AP0C0L4 1744 aa20.49■□□□□ 0.87
PCM1-218ENST00000523055 CAPN15O75808 1086 aa20.49■□□□□ 0.87
PCM1-218ENST00000523055 GYS1P13807 737 aa20.49■□□□□ 0.87
PCM1-218ENST00000523055 ARHGEF1Q92888 912 aaKnown RBP20.49■□□□□ 0.87
PCM1-218ENST00000523055 KCPQ6ZWJ8 1503 aa20.49■□□□□ 0.87
PCM1-218ENST00000523055 ARFGEF1Q9Y6D6 1849 aa20.48■□□□□ 0.87
PCM1-218ENST00000523055 TRAPPC3LQ5T215 181 aa20.48■□□□□ 0.87
PCM1-218ENST00000523055 SPG7Q9UQ90 795 aa20.48■□□□□ 0.87
PCM1-218ENST00000523055 PLEKHG2Q9H7P9 1386 aa20.48■□□□□ 0.87
PCM1-218ENST00000523055 NPC1L1Q9UHC9 1359 aa20.48■□□□□ 0.87
PCM1-218ENST00000523055 VIRMAQ69YN4 1812 aaKnown RBP20.47■□□□□ 0.87
PCM1-218ENST00000523055 PHKG2P15735 406 aa20.47■□□□□ 0.87
PCM1-218ENST00000523055 PRELPP51888 382 aa20.47■□□□□ 0.87
PCM1-218ENST00000523055 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP20.47■□□□□ 0.875e-9■■□□□ 14.5
PCM1-218ENST00000523055 RTCBQ9Y3I0 505 aaKnown RBP20.47■□□□□ 0.87
PCM1-218ENST00000523055 MTHFSP49914 203 aa20.46■□□□□ 0.87
PCM1-218ENST00000523055 AEBP1Q8IUX7 1158 aa20.46■□□□□ 0.87
PCM1-218ENST00000523055 CCDC87Q9NVE4 849 aa20.46■□□□□ 0.87
PCM1-218ENST00000523055 TNS4Q8IZW8 715 aa20.45■□□□□ 0.86
PCM1-218ENST00000523055 DCAF5Q96JK2 942 aa20.45■□□□□ 0.86
PCM1-218ENST00000523055 MYH14Q7Z406 1995 aaKnown RBP20.45■□□□□ 0.86
PCM1-218ENST00000523055 ZNF831Q5JPB2 1677 aa20.45■□□□□ 0.86
PCM1-218ENST00000523055 C16orf71Q8IYS4 520 aaPredicted RBP20.44■□□□□ 0.86
PCM1-218ENST00000523055 COL5A3P25940 1745 aaPredicted RBP20.44■□□□□ 0.86
PCM1-218ENST00000523055 ADRA2BP18089 450 aa20.44■□□□□ 0.86
PCM1-218ENST00000523055 IL13P35225 146 aa20.44■□□□□ 0.86
PCM1-218ENST00000523055 RC3H1Q5TC82 1133 aaKnown RBP20.44■□□□□ 0.86
PCM1-218ENST00000523055 IFNL2Q8IZJ0 200 aa20.44■□□□□ 0.86
PCM1-218ENST00000523055 RRAGCQ9HB90 399 aa20.44■□□□□ 0.86
PCM1-218ENST00000523055 COL3A1P02461 1466 aaPredicted RBP20.43■□□□□ 0.86
PCM1-218ENST00000523055 SBF1O95248 1867 aa20.42■□□□□ 0.86
PCM1-218ENST00000523055 CNTNAP4Q9C0A0 1308 aa20.42■□□□□ 0.86
PCM1-218ENST00000523055 RPS6KA4O75676 772 aa20.42■□□□□ 0.86
PCM1-218ENST00000523055 PIM2Q9P1W9 311 aa20.42■□□□□ 0.86
PCM1-218ENST00000523055 KDM2BQ8NHM5 1336 aa20.41■□□□□ 0.86
PCM1-218ENST00000523055 RNF181Q9P0P0 153 aa20.41■□□□□ 0.86
PCM1-218ENST00000523055 PARP3Q9Y6F1 533 aa20.41■□□□□ 0.86
PCM1-218ENST00000523055 SULT6B1Q6IMI4 303 aa20.4■□□□□ 0.86
PCM1-218ENST00000523055 TNRC6CQ9HCJ0 1690 aaKnown RBP20.4■□□□□ 0.86
PCM1-218ENST00000523055 RFC4P35249 363 aa20.39■□□□□ 0.85
PCM1-218ENST00000523055 DDR1Q08345 913 aa20.39■□□□□ 0.85
PCM1-218ENST00000523055 DALRD3Q5D0E6 543 aaKnown RBP20.38■□□□□ 0.85
PCM1-218ENST00000523055 SCN11AQ9UI33 1791 aa20.38■□□□□ 0.85
PCM1-218ENST00000523055 SMC1BQ8NDV3 1235 aa20.37■□□□□ 0.85
PCM1-218ENST00000523055 RBM42Q9BTD8 480 aaKnown RBP20.37■□□□□ 0.85
PCM1-218ENST00000523055 HSPA1AP0DMV8 641 aaKnown RBP20.36■□□□□ 0.85
PCM1-218ENST00000523055 HSPA1BP0DMV9 641 aaKnown RBP20.36■□□□□ 0.85
PCM1-218ENST00000523055 CHRNA5P30532 468 aa20.36■□□□□ 0.85
PCM1-218ENST00000523055 FKBP8Q14318 412 aa20.36■□□□□ 0.85
PCM1-218ENST00000523055 SRP68Q9UHB9 627 aaKnown RBP20.36■□□□□ 0.85
PCM1-218ENST00000523055 KDM6AO15550 1401 aaPredicted RBP20.36■□□□□ 0.85
PCM1-218ENST00000523055 ERVV-2B6SEH9 535 aa20.36■□□□□ 0.85
PCM1-218ENST00000523055 HMOX1P09601 288 aa20.36■□□□□ 0.85
PCM1-218ENST00000523055 DIAPH1O60610 1272 aaKnown RBP20.35■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 67 ms