RNA–Protein interactions for RNA: ENST00000522875.5

PVT1-214, Transcript of Pvt1 oncogene, humanhuman

TSL 5 BASIC

Gene PVT1, Length 922 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-214ENST00000522875 USP17L20D6RJB6 530 aa10.64□□□□□ -0.71
PVT1-214ENST00000522875 LILRA1O75019 489 aa10.64□□□□□ -0.71
PVT1-214ENST00000522875 ADD1P35611 737 aaKnown RBP10.64□□□□□ -0.71
PVT1-214ENST00000522875 GTF2IP78347 998 aa10.64□□□□□ -0.71
PVT1-214ENST00000522875 USP17L24Q0WX57 530 aa10.64□□□□□ -0.71
PVT1-214ENST00000522875 PTK7Q13308 1070 aa10.64□□□□□ -0.71
PVT1-214ENST00000522875 SIRT1Q96EB6 747 aa10.64□□□□□ -0.71
PVT1-214ENST00000522875 KLF16Q9BXK1 252 aaPredicted RBP10.64□□□□□ -0.71
PVT1-214ENST00000522875 PCDHGA11Q9Y5H2 935 aa10.64□□□□□ -0.71
PVT1-214ENST00000522875 EMILIN1Q9Y6C2 1016 aa10.64□□□□□ -0.71
PVT1-214ENST00000522875 FAM196BA6NMK8 535 aa10.63□□□□□ -0.71
PVT1-214ENST00000522875 ZBTB7BO15156 539 aaPredicted RBP10.63□□□□□ -0.71
PVT1-214ENST00000522875 MYCP01106 439 aaPredicted RBP10.63□□□□□ -0.71
PVT1-214ENST00000522875 MYT1Q01538 1121 aa10.63□□□□□ -0.71
PVT1-214ENST00000522875 LARP1Q6PKG0 1096 aaKnown RBP10.63□□□□□ -0.71
PVT1-214ENST00000522875 HPS1Q92902 700 aa10.63□□□□□ -0.71
PVT1-214ENST00000522875 ITPKCQ96DU7 683 aa10.63□□□□□ -0.71
PVT1-214ENST00000522875 ZNF594Q96JF6 807 aaPredicted RBP10.63□□□□□ -0.71
PVT1-214ENST00000522875 OSBPL3Q9H4L5 887 aa10.63□□□□□ -0.71
PVT1-214ENST00000522875 NUP160Q12769 1436 aa10.63□□□□□ -0.71
PVT1-214ENST00000522875 CARNS1A5YM72 827 aa10.62□□□□□ -0.71
PVT1-214ENST00000522875 TRIM50Q86XT4 487 aa10.62□□□□□ -0.71
PVT1-214ENST00000522875 DNAAF2Q9NVR5 837 aaKnown RBP10.62□□□□□ -0.71
PVT1-214ENST00000522875 PGPEP1Q9NXJ5 209 aa10.62□□□□□ -0.71
PVT1-214ENST00000522875 ZMIZ1Q9ULJ6 1067 aa10.62□□□□□ -0.71
PVT1-214ENST00000522875 KIAA0586Q9BVV6 1533 aa10.62□□□□□ -0.71
PVT1-214ENST00000522875 ZIC2O95409 532 aaPredicted RBP10.61□□□□□ -0.71
PVT1-214ENST00000522875 STAU1O95793 577 aaKnown RBP10.61□□□□□ -0.71
PVT1-214ENST00000522875 ATP1A2P50993 1020 aa10.61□□□□□ -0.71
PVT1-214ENST00000522875 WDR4P57081 412 aaKnown RBP10.61□□□□□ -0.71
PVT1-214ENST00000522875 CBLBQ13191 982 aa10.61□□□□□ -0.71
PVT1-214ENST00000522875 ZFAND3Q9H8U3 227 aa10.61□□□□□ -0.71
PVT1-214ENST00000522875 NOVA2Q9UNW9 492 aaKnown RBP10.61□□□□□ -0.71
PVT1-214ENST00000522875 IQGAP2Q13576 1575 aa10.6□□□□□ -0.71
PVT1-214ENST00000522875 DKK1O94907 266 aa10.6□□□□□ -0.71
PVT1-214ENST00000522875 TIMP2P16035 220 aa10.6□□□□□ -0.71
PVT1-214ENST00000522875 STK32AQ8WU08 396 aa10.6□□□□□ -0.71
PVT1-214ENST00000522875 ESF1Q9H501 851 aaKnown RBP10.6□□□□□ -0.71
PVT1-214ENST00000522875 CEP162Q5TB80 1403 aa10.59□□□□□ -0.71
PVT1-214ENST00000522875 PSME1Q06323 249 aa10.59□□□□□ -0.71
PVT1-214ENST00000522875 DPYDQ12882 1025 aa10.59□□□□□ -0.71
PVT1-214ENST00000522875 ELOAQ14241 798 aaKnown RBP10.59□□□□□ -0.71
PVT1-214ENST00000522875 LARGE2Q8N3Y3 721 aa10.59□□□□□ -0.71
PVT1-214ENST00000522875 TTBK1Q5TCY1 1321 aaPredicted RBP10.58□□□□□ -0.71
PVT1-214ENST00000522875 CLIP1P30622 1438 aa10.58□□□□□ -0.72
PVT1-214ENST00000522875 CSB-PGBD3P0DP91 1061 aa10.58□□□□□ -0.72
PVT1-214ENST00000522875 CCDC102BQ68D86 513 aa10.58□□□□□ -0.72
PVT1-214ENST00000522875 ANKMY2Q8IV38 441 aa10.58□□□□□ -0.72
PVT1-214ENST00000522875 TMEM164Q5U3C3 297 aa10.57□□□□□ -0.72
PVT1-214ENST00000522875 SIX5Q8N196 739 aa10.57□□□□□ -0.72
PVT1-214ENST00000522875 TPCN2Q8NHX9 752 aa10.57□□□□□ -0.72
PVT1-214ENST00000522875 FAM187AA6NFU0 413 aa10.56□□□□□ -0.72
PVT1-214ENST00000522875 CLASP1Q7Z460 1538 aa10.56□□□□□ -0.72
PVT1-214ENST00000522875 TMEM88BA6NKF7 163 aa10.55□□□□□ -0.72
PVT1-214ENST00000522875 SFI1A8K8P3 1242 aa10.55□□□□□ -0.72
PVT1-214ENST00000522875 Q6ZVU0 165 aa10.55□□□□□ -0.72
PVT1-214ENST00000522875 KDF1Q8NAX2 398 aaPredicted RBP10.55□□□□□ -0.72
PVT1-214ENST00000522875 SERBP1Q8NC51 408 aaKnown RBP eCLIP10.55□□□□□ -0.72
PVT1-214ENST00000522875 FAM200AQ8TCP9 573 aa10.55□□□□□ -0.72
PVT1-214ENST00000522875 TRIM52Q96A61 297 aa10.55□□□□□ -0.72
PVT1-214ENST00000522875 ARHGEF11O15085 1522 aa10.54□□□□□ -0.72
PVT1-214ENST00000522875 TMEM229AB2RXF0 380 aa10.54□□□□□ -0.72
PVT1-214ENST00000522875 GFRA3O60609 400 aa10.54□□□□□ -0.72
PVT1-214ENST00000522875 SCNN1DP51172 638 aa10.54□□□□□ -0.72
PVT1-214ENST00000522875 CYP2U1Q7Z449 544 aa10.54□□□□□ -0.72
PVT1-214ENST00000522875 PRG4Q92954 1404 aaPredicted RBP10.54□□□□□ -0.72
PVT1-214ENST00000522875 AGBL1Q96MI9 1066 aa10.54□□□□□ -0.72
PVT1-214ENST00000522875 RAB6BQ9NRW1 208 aa10.54□□□□□ -0.72
PVT1-214ENST00000522875 UGGT2Q9NYU1 1516 aa10.53□□□□□ -0.72
PVT1-214ENST00000522875 CARMIL2Q6F5E8 1435 aa10.53□□□□□ -0.72
PVT1-214ENST00000522875 ADH1AP07327 375 aa10.53□□□□□ -0.72
PVT1-214ENST00000522875 ETNK1Q9HBU6 452 aa10.53□□□□□ -0.72
PVT1-214ENST00000522875 ARHGAP35Q9NRY4 1499 aa10.53□□□□□ -0.72
PVT1-214ENST00000522875 FHOD3Q2V2M9 1422 aa10.52□□□□□ -0.73
PVT1-214ENST00000522875 GDF10P55107 478 aa10.52□□□□□ -0.73
PVT1-214ENST00000522875 SEC13P55735 322 aa10.52□□□□□ -0.73
PVT1-214ENST00000522875 ARHGEF10LQ9HCE6 1279 aa10.52□□□□□ -0.73
PVT1-214ENST00000522875 EFCAB5A4FU69 1503 aa10.52□□□□□ -0.73
PVT1-214ENST00000522875 CAPN5O15484 640 aaPredicted RBP10.51□□□□□ -0.73
PVT1-214ENST00000522875 LGR5O75473 907 aa10.51□□□□□ -0.73
PVT1-214ENST00000522875 GNRH1P01148 92 aa10.51□□□□□ -0.73
PVT1-214ENST00000522875 PDIA4P13667 645 aaKnown RBP10.51□□□□□ -0.73
PVT1-214ENST00000522875 RELBQ01201 579 aa10.51□□□□□ -0.73
PVT1-214ENST00000522875 FAM69CQ0P6D2 419 aa10.51□□□□□ -0.73
PVT1-214ENST00000522875 ZNF358Q9NW07 568 aa10.51□□□□□ -0.73
PVT1-214ENST00000522875 USTQ9Y2C2 406 aa10.51□□□□□ -0.73
PVT1-214ENST00000522875 RBM19Q9Y4C8 960 aaKnown RBP10.51□□□□□ -0.73
PVT1-214ENST00000522875 SHROOM2Q13796 1616 aa10.51□□□□□ -0.73
PVT1-214ENST00000522875 INHAP05111 366 aa10.5□□□□□ -0.73
PVT1-214ENST00000522875 MEIOBQ8N635 442 aa10.5□□□□□ -0.73
PVT1-214ENST00000522875 ZNF395Q9H8N7 513 aaPredicted RBP10.5□□□□□ -0.73
PVT1-214ENST00000522875 SERTAD1Q9UHV2 236 aa10.5□□□□□ -0.73
PVT1-214ENST00000522875 KIAA0556O60303 1618 aa10.5□□□□□ -0.73
PVT1-214ENST00000522875 DISP1Q96F81 1524 aa10.49□□□□□ -0.73
PVT1-214ENST00000522875 SAMD9Q5K651 1589 aa10.49□□□□□ -0.73
PVT1-214ENST00000522875 A0A1W2PRU2 124 aa10.49□□□□□ -0.73
PVT1-214ENST00000522875 NRG2O14511 850 aaPredicted RBP10.49□□□□□ -0.73
PVT1-214ENST00000522875 AVPP01185 164 aa10.49□□□□□ -0.73
PVT1-214ENST00000522875 PTGIRP43119 386 aa10.49□□□□□ -0.73
PVT1-214ENST00000522875 TSEN2Q8NCE0 465 aaKnown RBP10.49□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms