RNA–Protein interactions for RNA: ENST00000522504.5

TRAPPC9-213, Transcript of trafficking protein particle complex 9, humanhuman

TSL 3

Gene TRAPPC9, Length 665 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-213ENST00000522504 POLR3GLQ9BT43 218 aa21.13■□□□□ 0.97
TRAPPC9-213ENST00000522504 ZNF526Q8TF50 670 aaPredicted RBP21.12■□□□□ 0.97
TRAPPC9-213ENST00000522504 KDRP35968 1356 aa21.1■□□□□ 0.97
TRAPPC9-213ENST00000522504 MMP10P09238 476 aa21.1■□□□□ 0.97
TRAPPC9-213ENST00000522504 GPBP1L1Q9HC44 474 aaPredicted RBP21.1■□□□□ 0.97
TRAPPC9-213ENST00000522504 TIMELESSQ9UNS1 1208 aa21.09■□□□□ 0.97
TRAPPC9-213ENST00000522504 ERVV-2B6SEH9 535 aa21.06■□□□□ 0.96
TRAPPC9-213ENST00000522504 PANK3Q9H999 370 aa21.06■□□□□ 0.96
TRAPPC9-213ENST00000522504 PXDNLA1KZ92 1463 aa21.06■□□□□ 0.96
TRAPPC9-213ENST00000522504 KDM6AO15550 1401 aaPredicted RBP21.05■□□□□ 0.96
TRAPPC9-213ENST00000522504 RBM42Q9BTD8 480 aaKnown RBP21.05■□□□□ 0.96
TRAPPC9-213ENST00000522504 TRAPPC3LQ5T215 181 aa21.04■□□□□ 0.96
TRAPPC9-213ENST00000522504 AEBP1Q8IUX7 1158 aa21.04■□□□□ 0.96
TRAPPC9-213ENST00000522504 ARHGEF1Q92888 912 aaKnown RBP21.04■□□□□ 0.96
TRAPPC9-213ENST00000522504 DCAF5Q96JK2 942 aa21.04■□□□□ 0.96
TRAPPC9-213ENST00000522504 RTCBQ9Y3I0 505 aaKnown RBP21.04■□□□□ 0.96
TRAPPC9-213ENST00000522504 PLEKHG2Q9H7P9 1386 aa21.04■□□□□ 0.96
TRAPPC9-213ENST00000522504 KIAA1551Q9HCM1 1747 aa21.02■□□□□ 0.96
TRAPPC9-213ENST00000522504 A0A0G2JLW4 131 aa21.02■□□□□ 0.96
TRAPPC9-213ENST00000522504 HSPA5P11021 654 aaKnown RBP21.02■□□□□ 0.96
TRAPPC9-213ENST00000522504 PLEKHO1Q53GL0 409 aaPredicted RBP21.02■□□□□ 0.96
TRAPPC9-213ENST00000522504 RC3H1Q5TC82 1133 aaKnown RBP21.02■□□□□ 0.96
TRAPPC9-213ENST00000522504 ZNF530Q6P9A1 599 aaPredicted RBP21.02■□□□□ 0.96
TRAPPC9-213ENST00000522504 CICQ96RK0 1608 aaPredicted RBP21.02■□□□□ 0.96
TRAPPC9-213ENST00000522504 KIF3CO14782 793 aa21.01■□□□□ 0.95
TRAPPC9-213ENST00000522504 GYS1P13807 737 aa21.01■□□□□ 0.95
TRAPPC9-213ENST00000522504 PCGF6Q9BYE7 350 aa21.01■□□□□ 0.95
TRAPPC9-213ENST00000522504 C10orf71Q711Q0 1435 aa21.01■□□□□ 0.95
TRAPPC9-213ENST00000522504 CNTNAP4Q9C0A0 1308 aa21.01■□□□□ 0.95
TRAPPC9-213ENST00000522504 HSP90AB1P08238 724 aaKnown RBP21■□□□□ 0.95
TRAPPC9-213ENST00000522504 HSPA6P17066 643 aa21■□□□□ 0.95
TRAPPC9-213ENST00000522504 NLGN1Q8N2Q7 840 aa21■□□□□ 0.95
TRAPPC9-213ENST00000522504 RPS6KA4O75676 772 aa20.99■□□□□ 0.95
TRAPPC9-213ENST00000522504 CABP4P57796 275 aa20.99■□□□□ 0.95
TRAPPC9-213ENST00000522504 KIF13BQ9NQT8 1826 aa20.99■□□□□ 0.95
TRAPPC9-213ENST00000522504 ZNF831Q5JPB2 1677 aa20.99■□□□□ 0.95
TRAPPC9-213ENST00000522504 COL5A3P25940 1745 aaPredicted RBP20.98■□□□□ 0.95
TRAPPC9-213ENST00000522504 PTCD1O75127 700 aaKnown RBP20.98■□□□□ 0.95
TRAPPC9-213ENST00000522504 DPEP1P16444 411 aa20.98■□□□□ 0.95
TRAPPC9-213ENST00000522504 ADRA2BP18089 450 aa20.98■□□□□ 0.95
TRAPPC9-213ENST00000522504 TGFB2P61812 414 aa20.98■□□□□ 0.95
TRAPPC9-213ENST00000522504 AMOTQ4VCS5 1084 aa20.98■□□□□ 0.95
TRAPPC9-213ENST00000522504 BCS1LQ9Y276 419 aa20.98■□□□□ 0.95
TRAPPC9-213ENST00000522504 CLSPNQ9HAW4 1339 aa20.98■□□□□ 0.95
TRAPPC9-213ENST00000522504 N4BP2Q86UW6 1770 aaPredicted RBP20.97■□□□□ 0.95
TRAPPC9-213ENST00000522504 RFC4P35249 363 aa20.97■□□□□ 0.95
TRAPPC9-213ENST00000522504 MTHFSP49914 203 aa20.97■□□□□ 0.95
TRAPPC9-213ENST00000522504 EIF4G2P78344 907 aaKnown RBP eCLIP20.97■□□□□ 0.958e-7■■■■■ 44
TRAPPC9-213ENST00000522504 NFATC2IPQ8NCF5 419 aa20.97■□□□□ 0.95
TRAPPC9-213ENST00000522504 MYH14Q7Z406 1995 aaKnown RBP20.97■□□□□ 0.95
TRAPPC9-213ENST00000522504 KCNA3P22001 575 aa20.96■□□□□ 0.95
TRAPPC9-213ENST00000522504 CRKLP46109 303 aaKnown RBP20.95■□□□□ 0.94
TRAPPC9-213ENST00000522504 SULT6B1Q6IMI4 303 aa20.95■□□□□ 0.94
TRAPPC9-213ENST00000522504 MORC1Q86VD1 984 aa20.95■□□□□ 0.94
TRAPPC9-213ENST00000522504 SRP68Q9UHB9 627 aaKnown RBP20.95■□□□□ 0.94
TRAPPC9-213ENST00000522504 C4AP0C0L4 1744 aa20.95■□□□□ 0.94
TRAPPC9-213ENST00000522504 IFFO2Q5TF58 517 aa20.94■□□□□ 0.94
TRAPPC9-213ENST00000522504 CCDC87Q9NVE4 849 aa20.94■□□□□ 0.94
TRAPPC9-213ENST00000522504 IL13P35225 146 aa20.93■□□□□ 0.94
TRAPPC9-213ENST00000522504 FKBP8Q14318 412 aa20.93■□□□□ 0.94
TRAPPC9-213ENST00000522504 ARHGAP27Q6ZUM4 889 aa20.93■□□□□ 0.94
TRAPPC9-213ENST00000522504 PARP3Q9Y6F1 533 aa20.93■□□□□ 0.94
TRAPPC9-213ENST00000522504 DDR1Q08345 913 aa20.92■□□□□ 0.94
TRAPPC9-213ENST00000522504 C1orf141Q5JVX7 400 aa20.92■□□□□ 0.94
TRAPPC9-213ENST00000522504 FCHSD2O94868 740 aa20.91■□□□□ 0.94
TRAPPC9-213ENST00000522504 INTS5Q6P9B9 1019 aaKnown RBP20.91■□□□□ 0.94
TRAPPC9-213ENST00000522504 USP42Q9H9J4 1324 aaKnown RBP20.9■□□□□ 0.94
TRAPPC9-213ENST00000522504 LGR6Q9HBX8 967 aa20.89■□□□□ 0.93
TRAPPC9-213ENST00000522504 NMRK2Q9NPI5 230 aa20.89■□□□□ 0.93
TRAPPC9-213ENST00000522504 TJP1Q07157 1748 aa20.88■□□□□ 0.93
TRAPPC9-213ENST00000522504 AMER1Q5JTC6 1135 aaPredicted RBP20.87■□□□□ 0.93
TRAPPC9-213ENST00000522504 DNAJC10Q8IXB1 793 aa20.87■□□□□ 0.93
TRAPPC9-213ENST00000522504 KNSTRNQ9Y448 316 aa20.87■□□□□ 0.93
TRAPPC9-213ENST00000522504 BRCA1P38398 1863 aaKnown RBP20.87■□□□□ 0.93
TRAPPC9-213ENST00000522504 CHRNA5P30532 468 aa20.86■□□□□ 0.93
TRAPPC9-213ENST00000522504 C9orf131Q5VYM1 1079 aa20.86■□□□□ 0.93
TRAPPC9-213ENST00000522504 ADAMTS7Q9UKP4 1686 aa20.86■□□□□ 0.93
TRAPPC9-213ENST00000522504 TM4SF1P30408 202 aa20.85■□□□□ 0.93
TRAPPC9-213ENST00000522504 SLC52A2Q9HAB3 445 aa20.85■□□□□ 0.93
TRAPPC9-213ENST00000522504 PIM2Q9P1W9 311 aa20.85■□□□□ 0.93
TRAPPC9-213ENST00000522504 POLRMTO00411 1230 aaKnown RBP20.84■□□□□ 0.93
TRAPPC9-213ENST00000522504 TOMM70O94826 608 aa20.84■□□□□ 0.93
TRAPPC9-213ENST00000522504 SLC39A6Q13433 755 aa20.84■□□□□ 0.93
TRAPPC9-213ENST00000522504 AKAP4Q5JQC9 854 aa20.84■□□□□ 0.93
TRAPPC9-213ENST00000522504 PCNTO95613 3336 aa20.84■□□□□ 0.93
TRAPPC9-213ENST00000522504 HMOX1P09601 288 aa20.83■□□□□ 0.93
TRAPPC9-213ENST00000522504 DALRD3Q5D0E6 543 aaKnown RBP20.83■□□□□ 0.93
TRAPPC9-213ENST00000522504 SCN11AQ9UI33 1791 aa20.82■□□□□ 0.92
TRAPPC9-213ENST00000522504 SOS1Q07889 1333 aaPredicted RBP20.82■□□□□ 0.92
TRAPPC9-213ENST00000522504 RNMTO43148 476 aaKnown RBP20.82■□□□□ 0.92
TRAPPC9-213ENST00000522504 CYP19A1P11511 503 aaPredicted RBP20.82■□□□□ 0.92
TRAPPC9-213ENST00000522504 USPL1Q5W0Q7 1092 aa20.82■□□□□ 0.92
TRAPPC9-213ENST00000522504 DNAJC5GQ8N7S2 189 aa20.82■□□□□ 0.92
TRAPPC9-213ENST00000522504 APLP1P51693 650 aa20.81■□□□□ 0.92
TRAPPC9-213ENST00000522504 MRC1P22897 1456 aa20.8■□□□□ 0.92
TRAPPC9-213ENST00000522504 KCPQ6ZWJ8 1503 aa20.79■□□□□ 0.92
TRAPPC9-213ENST00000522504 ARFGEF1Q9Y6D6 1849 aa20.79■□□□□ 0.92
TRAPPC9-213ENST00000522504 ZPR1O75312 459 aa20.79■□□□□ 0.92
TRAPPC9-213ENST00000522504 MTHFSDQ2M296 383 aaKnown RBP20.79■□□□□ 0.92
TRAPPC9-213ENST00000522504 ZBTB1Q9Y2K1 713 aa20.79■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 262.2 ms