RNA–Protein interactions for RNA: ENST00000521667.5

TRAPPC9-210, Transcript of trafficking protein particle complex 9, humanhuman

TSL 1 (best)

Gene TRAPPC9, Length 2,021 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-210ENST00000521667 IPO9Q96P70 1041 aaKnown RBP23.26■■□□□ 1.31
TRAPPC9-210ENST00000521667 KDM3BQ7LBC6 1761 aa23.25■■□□□ 1.31
TRAPPC9-210ENST00000521667 BTBD11A6QL63 1104 aa23.25■■□□□ 1.31
TRAPPC9-210ENST00000521667 HOXB7P09629 217 aa23.24■■□□□ 1.31
TRAPPC9-210ENST00000521667 TATP17735 454 aaPredicted RBP23.24■■□□□ 1.31
TRAPPC9-210ENST00000521667 GCC1Q96CN9 775 aa23.24■■□□□ 1.31
TRAPPC9-210ENST00000521667 NUCB1Q02818 461 aa23.23■■□□□ 1.31
TRAPPC9-210ENST00000521667 FLIIQ13045 1269 aa23.23■■□□□ 1.31
TRAPPC9-210ENST00000521667 HDGFL1Q5TGJ6 251 aa23.23■■□□□ 1.31
TRAPPC9-210ENST00000521667 SIRT2Q8IXJ6 389 aa23.23■■□□□ 1.31
TRAPPC9-210ENST00000521667 NECTIN2Q92692 538 aa23.23■■□□□ 1.31
TRAPPC9-210ENST00000521667 PLEKHG2Q9H7P9 1386 aa23.23■■□□□ 1.31
TRAPPC9-210ENST00000521667 CCT4P50991 539 aaKnown RBP23.23■■□□□ 1.31
TRAPPC9-210ENST00000521667 ABCA3Q99758 1704 aa23.22■■□□□ 1.31
TRAPPC9-210ENST00000521667 CHMP4AQ9BY43 222 aa23.21■■□□□ 1.31
TRAPPC9-210ENST00000521667 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP23.21■■□□□ 1.311e-6■■■□□ 17.1
TRAPPC9-210ENST00000521667 F6X3S4 739 aa23.21■■□□□ 1.31
TRAPPC9-210ENST00000521667 SPG7Q9UQ90 795 aa23.21■■□□□ 1.31
TRAPPC9-210ENST00000521667 MEGF6O75095 1541 aa23.2■■□□□ 1.31
TRAPPC9-210ENST00000521667 KCNQ3O43525 872 aa23.2■■□□□ 1.3
TRAPPC9-210ENST00000521667 FKBP5Q13451 457 aaPredicted RBP23.2■■□□□ 1.3
TRAPPC9-210ENST00000521667 SLC4A10Q6U841 1118 aa23.2■■□□□ 1.3
TRAPPC9-210ENST00000521667 ADAMTS7Q9UKP4 1686 aa23.2■■□□□ 1.3
TRAPPC9-210ENST00000521667 CHD1LQ86WJ1 897 aa23.19■■□□□ 1.3
TRAPPC9-210ENST00000521667 MEIS3Q99687 375 aa23.18■■□□□ 1.3
TRAPPC9-210ENST00000521667 PRDM11Q9NQV5 511 aa23.18■■□□□ 1.3
TRAPPC9-210ENST00000521667 ATP10DQ9P241 1426 aa23.18■■□□□ 1.3
TRAPPC9-210ENST00000521667 AHDC1Q5TGY3 1603 aaPredicted RBP23.18■■□□□ 1.3
TRAPPC9-210ENST00000521667 PIP4K2BP78356 416 aa23.18■■□□□ 1.3
TRAPPC9-210ENST00000521667 RPAP2Q8IXW5 612 aaPredicted RBP23.18■■□□□ 1.3
TRAPPC9-210ENST00000521667 PHKG2P15735 406 aa23.17■■□□□ 1.3
TRAPPC9-210ENST00000521667 ANKRD44Q8N8A2 993 aa23.17■■□□□ 1.3
TRAPPC9-210ENST00000521667 VIRMAQ69YN4 1812 aaKnown RBP23.17■■□□□ 1.3
TRAPPC9-210ENST00000521667 LNPKQ9C0E8 428 aa23.16■■□□□ 1.3
TRAPPC9-210ENST00000521667 EIF2S2P20042 333 aaKnown RBP23.16■■□□□ 1.3
TRAPPC9-210ENST00000521667 NOP58Q9Y2X3 529 aaKnown RBP23.16■■□□□ 1.3
TRAPPC9-210ENST00000521667 ANKRD45Q5TZF3 282 aa23.15■■□□□ 1.3
TRAPPC9-210ENST00000521667 CEP85Q6P2H3 762 aa23.15■■□□□ 1.3
TRAPPC9-210ENST00000521667 ERICH6Q7L0X2 663 aa23.15■■□□□ 1.3
TRAPPC9-210ENST00000521667 IFNL2Q8IZJ0 200 aa23.15■■□□□ 1.3
TRAPPC9-210ENST00000521667 KDM6AO15550 1401 aaPredicted RBP23.14■■□□□ 1.3
TRAPPC9-210ENST00000521667 PXDNLA1KZ92 1463 aa23.14■■□□□ 1.3
TRAPPC9-210ENST00000521667 CACNA1FO60840 1977 aa23.14■■□□□ 1.29
TRAPPC9-210ENST00000521667 WDR17Q8IZU2 1322 aa23.14■■□□□ 1.29
TRAPPC9-210ENST00000521667 SIPA1L3O60292 1781 aaPredicted RBP23.14■■□□□ 1.29
TRAPPC9-210ENST00000521667 HEG1Q9ULI3 1381 aa23.14■■□□□ 1.29
TRAPPC9-210ENST00000521667 DCTPP1Q9H773 170 aa23.13■■□□□ 1.29
TRAPPC9-210ENST00000521667 PHAXQ9H814 394 aaKnown RBP23.13■■□□□ 1.29
TRAPPC9-210ENST00000521667 CHPF2Q9P2E5 772 aa23.13■■□□□ 1.29
TRAPPC9-210ENST00000521667 ZBTB47Q9UFB7 747 aaPredicted RBP23.13■■□□□ 1.29
TRAPPC9-210ENST00000521667 PHLPP1O60346 1717 aa23.12■■□□□ 1.29
TRAPPC9-210ENST00000521667 TOM1O60784 492 aa23.12■■□□□ 1.29
TRAPPC9-210ENST00000521667 SLC52A2Q9HAB3 445 aa23.12■■□□□ 1.29
TRAPPC9-210ENST00000521667 GIGYF1O75420 1035 aaPredicted RBP23.11■■□□□ 1.29
TRAPPC9-210ENST00000521667 COL5A2P05997 1499 aaPredicted RBP23.11■■□□□ 1.29
TRAPPC9-210ENST00000521667 DDRGK1Q96HY6 314 aa23.11■■□□□ 1.29
TRAPPC9-210ENST00000521667 PKD1L3Q7Z443 1732 aa23.11■■□□□ 1.29
TRAPPC9-210ENST00000521667 UBAP1LF5GYI3 381 aa23.09■■□□□ 1.29
TRAPPC9-210ENST00000521667 CYP27B1O15528 508 aa23.09■■□□□ 1.29
TRAPPC9-210ENST00000521667 SEC24BO95487 1268 aa23.09■■□□□ 1.29
TRAPPC9-210ENST00000521667 TOM1L2Q6ZVM7 507 aa23.09■■□□□ 1.29
TRAPPC9-210ENST00000521667 DCAF5Q96JK2 942 aa23.09■■□□□ 1.29
TRAPPC9-210ENST00000521667 GNAI3P08754 354 aa23.09■■□□□ 1.29
TRAPPC9-210ENST00000521667 DBF4Q9UBU7 674 aaPredicted RBP23.09■■□□□ 1.29
TRAPPC9-210ENST00000521667 SCN11AQ9UI33 1791 aa23.09■■□□□ 1.29
TRAPPC9-210ENST00000521667 COL16A1Q07092 1604 aaPredicted RBP23.09■■□□□ 1.29
TRAPPC9-210ENST00000521667 GNAI2P04899 355 aa23.08■■□□□ 1.29
TRAPPC9-210ENST00000521667 HSP90AB1P08238 724 aaKnown RBP23.08■■□□□ 1.29
TRAPPC9-210ENST00000521667 N4BP2Q86UW6 1770 aaPredicted RBP23.07■■□□□ 1.28
TRAPPC9-210ENST00000521667 HMMRO75330 724 aa23.07■■□□□ 1.28
TRAPPC9-210ENST00000521667 ZNF790Q6PG37 636 aa23.07■■□□□ 1.28
TRAPPC9-210ENST00000521667 MRC1P22897 1456 aa23.07■■□□□ 1.28
TRAPPC9-210ENST00000521667 NFATC2IPQ8NCF5 419 aa23.06■■□□□ 1.28
TRAPPC9-210ENST00000521667 ANP32EQ9BTT0 268 aa23.06■■□□□ 1.28
TRAPPC9-210ENST00000521667 COL22A1Q8NFW1 1626 aaPredicted RBP23.06■■□□□ 1.28
TRAPPC9-210ENST00000521667 CARD10Q9BWT7 1032 aa23.04■■□□□ 1.28
TRAPPC9-210ENST00000521667 PARP4Q9UKK3 1724 aaKnown RBP23.04■■□□□ 1.28
TRAPPC9-210ENST00000521667 PRAMEF22A3QJZ6 481 aa23.04■■□□□ 1.28
TRAPPC9-210ENST00000521667 SLC39A6Q13433 755 aa23.04■■□□□ 1.28
TRAPPC9-210ENST00000521667 ANXA1P04083 346 aa23.03■■□□□ 1.28
TRAPPC9-210ENST00000521667 DNAAF4Q8WXU2 420 aa23.03■■□□□ 1.28
TRAPPC9-210ENST00000521667 SRCIN1Q9C0H9 1055 aa23.03■■□□□ 1.28
TRAPPC9-210ENST00000521667 UPF2Q9HAU5 1272 aaKnown RBP23.03■■□□□ 1.28
TRAPPC9-210ENST00000521667 STRN4Q9NRL3 753 aa23.03■■□□□ 1.28
TRAPPC9-210ENST00000521667 PI4KAP2A4QPH2 592 aa23.03■■□□□ 1.28
TRAPPC9-210ENST00000521667 BMP2KLQ5H9B9 411 aa23.03■■□□□ 1.28
TRAPPC9-210ENST00000521667 PI4KAP1Q8N8J0 262 aa23.03■■□□□ 1.28
TRAPPC9-210ENST00000521667 USP44Q9H0E7 712 aa23.03■■□□□ 1.28
TRAPPC9-210ENST00000521667 PCDH11XQ9BZA7 1347 aa23.02■■□□□ 1.28
TRAPPC9-210ENST00000521667 PCDH11YQ9BZA8 1340 aa23.02■■□□□ 1.28
TRAPPC9-210ENST00000521667 ZCRB1Q8TBF4 217 aaKnown RBP23.02■■□□□ 1.28
TRAPPC9-210ENST00000521667 EVA1CP58658 441 aa23.01■■□□□ 1.27
TRAPPC9-210ENST00000521667 HYPKQ9NX55 129 aa23.01■■□□□ 1.27
TRAPPC9-210ENST00000521667 ADCY9O60503 1353 aa23■■□□□ 1.27
TRAPPC9-210ENST00000521667 IL2RBP14784 551 aa23■■□□□ 1.27
TRAPPC9-210ENST00000521667 PROSER3Q2NL68 480 aa23■■□□□ 1.27
TRAPPC9-210ENST00000521667 BEND3Q5T5X7 828 aa23■■□□□ 1.27
TRAPPC9-210ENST00000521667 LARP1Q6PKG0 1096 aaKnown RBP23■■□□□ 1.27
TRAPPC9-210ENST00000521667 UBTFL1P0CB47 393 aaPredicted RBP22.99■■□□□ 1.27
TRAPPC9-210ENST00000521667 CABP4P57796 275 aa22.99■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms