RNA–Protein interactions for RNA: ENST00000521589.5

NPIPB3-205, Transcript of nuclear pore complex interacting protein family member B3, humanhuman

TSL 3

Gene NPIPB3, Length 679 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB3-205ENST00000521589 ITPK1Q13572 414 aa11.91□□□□□ -0.5
NPIPB3-205ENST00000521589 LINC00116Q8NCU8 138 aa11.91□□□□□ -0.5
NPIPB3-205ENST00000521589 AK7Q96M32 723 aa11.91□□□□□ -0.5
NPIPB3-205ENST00000521589 COL3A1P02461 1466 aaPredicted RBP11.9□□□□□ -0.5
NPIPB3-205ENST00000521589 YY1P25490 414 aa11.9□□□□□ -0.5
NPIPB3-205ENST00000521589 C1orf141Q5JVX7 400 aa11.9□□□□□ -0.5
NPIPB3-205ENST00000521589 CC2D1BQ5T0F9 858 aaKnown RBP11.9□□□□□ -0.5
NPIPB3-205ENST00000521589 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.89□□□□□ -0.51
NPIPB3-205ENST00000521589 MSH5O43196 834 aa11.89□□□□□ -0.51
NPIPB3-205ENST00000521589 ATP6V1AP38606 617 aa11.89□□□□□ -0.51
NPIPB3-205ENST00000521589 SLC4A9Q96Q91 983 aa11.89□□□□□ -0.51
NPIPB3-205ENST00000521589 DIAPH1O60610 1272 aaKnown RBP11.88□□□□□ -0.51
NPIPB3-205ENST00000521589 CABP4P57796 275 aa11.88□□□□□ -0.51
NPIPB3-205ENST00000521589 MRC1P22897 1456 aa11.88□□□□□ -0.51
NPIPB3-205ENST00000521589 CNTNAP4Q9C0A0 1308 aa11.87□□□□□ -0.51
NPIPB3-205ENST00000521589 CICQ96RK0 1608 aaPredicted RBP11.87□□□□□ -0.51
NPIPB3-205ENST00000521589 AKAP4Q5JQC9 854 aa11.87□□□□□ -0.51
NPIPB3-205ENST00000521589 RC3H1Q5TC82 1133 aaKnown RBP11.87□□□□□ -0.51
NPIPB3-205ENST00000521589 MSL1Q68DK7 614 aa11.87□□□□□ -0.51
NPIPB3-205ENST00000521589 ADAMTS7Q9UKP4 1686 aa11.87□□□□□ -0.51
NPIPB3-205ENST00000521589 SCN11AQ9UI33 1791 aa11.87□□□□□ -0.51
NPIPB3-205ENST00000521589 GNPATO15228 680 aa11.86□□□□□ -0.51
NPIPB3-205ENST00000521589 HMOX1P09601 288 aa11.86□□□□□ -0.51
NPIPB3-205ENST00000521589 NFATC2IPQ8NCF5 419 aa11.86□□□□□ -0.51
NPIPB3-205ENST00000521589 NLGN2Q8NFZ4 835 aa11.86□□□□□ -0.51
NPIPB3-205ENST00000521589 COL5A3P25940 1745 aaPredicted RBP11.86□□□□□ -0.51
NPIPB3-205ENST00000521589 PHF14O94880 888 aa11.85□□□□□ -0.51
NPIPB3-205ENST00000521589 ADRA2BP18089 450 aa11.85□□□□□ -0.51
NPIPB3-205ENST00000521589 SMIM5Q71RC9 77 aa11.85□□□□□ -0.51
NPIPB3-205ENST00000521589 CD2APQ9Y5K6 639 aa11.85□□□□□ -0.51
NPIPB3-205ENST00000521589 MTHFSDQ2M296 383 aaKnown RBP11.84□□□□□ -0.51
NPIPB3-205ENST00000521589 KLHL34Q8N239 644 aa11.84□□□□□ -0.51
NPIPB3-205ENST00000521589 RBM42Q9BTD8 480 aaKnown RBP11.84□□□□□ -0.51
NPIPB3-205ENST00000521589 SLC52A2Q9HAB3 445 aa11.84□□□□□ -0.51
NPIPB3-205ENST00000521589 RTCBQ9Y3I0 505 aaKnown RBP11.84□□□□□ -0.51
NPIPB3-205ENST00000521589 RNMTO43148 476 aaKnown RBP11.83□□□□□ -0.52
NPIPB3-205ENST00000521589 RPS6KA4O75676 772 aa11.83□□□□□ -0.52
NPIPB3-205ENST00000521589 GPR162Q16538 588 aa11.83□□□□□ -0.52
NPIPB3-205ENST00000521589 LGR6Q9HBX8 967 aa11.83□□□□□ -0.52
NPIPB3-205ENST00000521589 CHD4Q14839 1912 aa11.83□□□□□ -0.52
NPIPB3-205ENST00000521589 MYH14Q7Z406 1995 aaKnown RBP11.83□□□□□ -0.52
NPIPB3-205ENST00000521589 PTCD1O75127 700 aaKnown RBP11.82□□□□□ -0.52
NPIPB3-205ENST00000521589 TRAPPC3LQ5T215 181 aa11.82□□□□□ -0.52
NPIPB3-205ENST00000521589 TJP1Q07157 1748 aa11.81□□□□□ -0.52
NPIPB3-205ENST00000521589 CRKLP46109 303 aaKnown RBP11.81□□□□□ -0.52
NPIPB3-205ENST00000521589 NLGN1Q8N2Q7 840 aa11.81□□□□□ -0.52
NPIPB3-205ENST00000521589 GAS2L2Q8NHY3 880 aa11.81□□□□□ -0.52
NPIPB3-205ENST00000521589 KCPQ6ZWJ8 1503 aa11.81□□□□□ -0.52
NPIPB3-205ENST00000521589 U2SURPO15042 1029 aaKnown RBP11.8□□□□□ -0.52
NPIPB3-205ENST00000521589 GRIN3BO60391 1043 aa11.8□□□□□ -0.52
NPIPB3-205ENST00000521589 MMP10P09238 476 aa11.8□□□□□ -0.52
NPIPB3-205ENST00000521589 YBX3P16989 372 aaKnown RBP eCLIP11.8□□□□□ -0.52
NPIPB3-205ENST00000521589 PPP2R1AP30153 589 aa11.8□□□□□ -0.52
NPIPB3-205ENST00000521589 ZNF784Q8NCA9 323 aaPredicted RBP11.8□□□□□ -0.52
NPIPB3-205ENST00000521589 ARHGEF1Q92888 912 aaKnown RBP11.8□□□□□ -0.52
NPIPB3-205ENST00000521589 CFAP53Q96M91 514 aa11.8□□□□□ -0.52
NPIPB3-205ENST00000521589 GYS1P13807 737 aa11.79□□□□□ -0.52
NPIPB3-205ENST00000521589 INTS5Q6P9B9 1019 aaKnown RBP11.79□□□□□ -0.52
NPIPB3-205ENST00000521589 VSIG10Q8N0Z9 540 aa11.79□□□□□ -0.52
NPIPB3-205ENST00000521589 RSPH6AQ9H0K4 717 aa11.79□□□□□ -0.52
NPIPB3-205ENST00000521589 C4AP0C0L4 1744 aa11.79□□□□□ -0.52
NPIPB3-205ENST00000521589 VIRMAQ69YN4 1812 aaKnown RBP11.79□□□□□ -0.52
NPIPB3-205ENST00000521589 CEMIPQ8WUJ3 1361 aa11.79□□□□□ -0.52
NPIPB3-205ENST00000521589 UBR2Q8IWV8 1755 aa11.78□□□□□ -0.52
NPIPB3-205ENST00000521589 RFC4P35249 363 aa11.78□□□□□ -0.52
NPIPB3-205ENST00000521589 CNGB1Q14028 1251 aaPredicted RBP11.78□□□□□ -0.52
NPIPB3-205ENST00000521589 USP42Q9H9J4 1324 aaKnown RBP11.78□□□□□ -0.52
NPIPB3-205ENST00000521589 C10orf71Q711Q0 1435 aa11.77□□□□□ -0.52
NPIPB3-205ENST00000521589 KIF13BQ9NQT8 1826 aa11.77□□□□□ -0.52
NPIPB3-205ENST00000521589 GNAT3A8MTJ3 354 aa11.77□□□□□ -0.53
NPIPB3-205ENST00000521589 CYP19A1P11511 503 aaPredicted RBP11.77□□□□□ -0.53
NPIPB3-205ENST00000521589 SLC39A6Q13433 755 aa11.77□□□□□ -0.53
NPIPB3-205ENST00000521589 DNAJC10Q8IXB1 793 aa11.77□□□□□ -0.53
NPIPB3-205ENST00000521589 PELP1Q8IZL8 1130 aaKnown RBP11.77□□□□□ -0.53
NPIPB3-205ENST00000521589 IL17REQ8NFR9 667 aa11.77□□□□□ -0.53
NPIPB3-205ENST00000521589 CCDC87Q9NVE4 849 aa11.77□□□□□ -0.53
NPIPB3-205ENST00000521589 NUDCQ9Y266 331 aa11.77□□□□□ -0.53
NPIPB3-205ENST00000521589 SOS1Q07889 1333 aaPredicted RBP11.77□□□□□ -0.53
NPIPB3-205ENST00000521589 PRKAR2BP31323 418 aa11.76□□□□□ -0.53
NPIPB3-205ENST00000521589 PHACTR3Q96KR7 559 aa11.76□□□□□ -0.53
NPIPB3-205ENST00000521589 SIPA1L3O60292 1781 aaPredicted RBP11.76□□□□□ -0.53
NPIPB3-205ENST00000521589 PXDNLA1KZ92 1463 aa11.76□□□□□ -0.53
NPIPB3-205ENST00000521589 FCHSD2O94868 740 aa11.75□□□□□ -0.53
NPIPB3-205ENST00000521589 TEFQ10587 303 aa11.75□□□□□ -0.53
NPIPB3-205ENST00000521589 KIAA1551Q9HCM1 1747 aa11.74□□□□□ -0.53
NPIPB3-205ENST00000521589 TGFB2P61812 414 aa11.74□□□□□ -0.53
NPIPB3-205ENST00000521589 FKBP8Q14318 412 aa11.74□□□□□ -0.53
NPIPB3-205ENST00000521589 ZNF790Q6PG37 636 aa11.74□□□□□ -0.53
NPIPB3-205ENST00000521589 SRP68Q9UHB9 627 aaKnown RBP11.74□□□□□ -0.53
NPIPB3-205ENST00000521589 U2AF1L5P0DN76 240 aaPredicted RBP11.73□□□□□ -0.53
NPIPB3-205ENST00000521589 COL15A1P39059 1388 aa11.73□□□□□ -0.53
NPIPB3-205ENST00000521589 U2AF1Q01081 240 aaKnown RBP eCLIP11.73□□□□□ -0.53
NPIPB3-205ENST00000521589 TTC5Q8N0Z6 440 aa11.73□□□□□ -0.53
NPIPB3-205ENST00000521589 ZNF496Q96IT1 587 aaPredicted RBP11.73□□□□□ -0.53
NPIPB3-205ENST00000521589 HEG1Q9ULI3 1381 aa11.73□□□□□ -0.53
NPIPB3-205ENST00000521589 ZBTB1Q9Y2K1 713 aa11.73□□□□□ -0.53
NPIPB3-205ENST00000521589 PARP3Q9Y6F1 533 aa11.73□□□□□ -0.53
NPIPB3-205ENST00000521589 ADCY9O60503 1353 aa11.72□□□□□ -0.53
NPIPB3-205ENST00000521589 STARD3NLO95772 234 aa11.72□□□□□ -0.53
NPIPB3-205ENST00000521589 TM4SF1P30408 202 aa11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms