RNA–Protein interactions for RNA: ENST00000521175.1

MCPH1-205, Transcript of microcephalin 1, humanhuman

TSL 3

Gene MCPH1, Length 777 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCPH1-205ENST00000521175 VASPP50552 380 aaPredicted RBP17.17■□□□□ 0.34
MCPH1-205ENST00000521175 NCAPD2Q15021 1401 aa17.17■□□□□ 0.34
MCPH1-205ENST00000521175 PANK3Q9H999 370 aa17.17■□□□□ 0.34
MCPH1-205ENST00000521175 CHD4Q14839 1912 aa17.17■□□□□ 0.34
MCPH1-205ENST00000521175 EIF4A2Q14240 407 aaKnown RBP17.16■□□□□ 0.34
MCPH1-205ENST00000521175 SMARCC1Q92922 1105 aaPredicted RBP17.16■□□□□ 0.34
MCPH1-205ENST00000521175 C4BP0C0L5 1744 aa17.16■□□□□ 0.34
MCPH1-205ENST00000521175 PIGBQ92521 554 aa17.15■□□□□ 0.34
MCPH1-205ENST00000521175 AK7Q96M32 723 aa17.15■□□□□ 0.34
MCPH1-205ENST00000521175 PHF14O94880 888 aa17.14■□□□□ 0.33
MCPH1-205ENST00000521175 NLGN2Q8NFZ4 835 aa17.14■□□□□ 0.33
MCPH1-205ENST00000521175 TMOD3Q9NYL9 352 aa17.14■□□□□ 0.33
MCPH1-205ENST00000521175 AMER1Q5JTC6 1135 aaPredicted RBP17.13■□□□□ 0.33
MCPH1-205ENST00000521175 IFNL2Q8IZJ0 200 aa17.13■□□□□ 0.33
MCPH1-205ENST00000521175 PHKG2P15735 406 aa17.12■□□□□ 0.33
MCPH1-205ENST00000521175 HMGB2P26583 209 aaKnown RBP17.12■□□□□ 0.33
MCPH1-205ENST00000521175 NKX1-1Q15270 411 aaPredicted RBP17.12■□□□□ 0.33
MCPH1-205ENST00000521175 ZNF784Q8NCA9 323 aaPredicted RBP17.12■□□□□ 0.33
MCPH1-205ENST00000521175 SMIM5Q71RC9 77 aa17.11■□□□□ 0.33
MCPH1-205ENST00000521175 MORC1Q86VD1 984 aa17.11■□□□□ 0.33
MCPH1-205ENST00000521175 FLAD1Q8NFF5 587 aa17.11■□□□□ 0.33
MCPH1-205ENST00000521175 LOC102724428A0A0B4J2F2 783 aa17.1■□□□□ 0.33
MCPH1-205ENST00000521175 SIK1P57059 783 aa17.1■□□□□ 0.33
MCPH1-205ENST00000521175 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP17.1■□□□□ 0.33
MCPH1-205ENST00000521175 UBR3Q6ZT12 1888 aa17.1■□□□□ 0.33
MCPH1-205ENST00000521175 ASAP1Q9ULH1 1129 aa17.09■□□□□ 0.33
MCPH1-205ENST00000521175 IGSF1Q8N6C5 1336 aa17.08■□□□□ 0.32
MCPH1-205ENST00000521175 AMIGO3Q86WK7 504 aa17.08■□□□□ 0.32
MCPH1-205ENST00000521175 LINC00116Q8NCU8 138 aa17.08■□□□□ 0.32
MCPH1-205ENST00000521175 KNSTRNQ9Y448 316 aa17.08■□□□□ 0.32
MCPH1-205ENST00000521175 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP17.07■□□□□ 0.32
MCPH1-205ENST00000521175 ATP6V1AP38606 617 aa17.07■□□□□ 0.32
MCPH1-205ENST00000521175 RTN4Q9NQC3 1192 aaKnown RBP17.07■□□□□ 0.32
MCPH1-205ENST00000521175 GNPATO15228 680 aa17.06■□□□□ 0.32
MCPH1-205ENST00000521175 PLEKHO1Q53GL0 409 aaPredicted RBP17.06■□□□□ 0.32
MCPH1-205ENST00000521175 ZNF530Q6P9A1 599 aaPredicted RBP17.06■□□□□ 0.32
MCPH1-205ENST00000521175 UTRNP46939 3433 aa17.06■□□□□ 0.32
MCPH1-205ENST00000521175 ITPK1Q13572 414 aa17.05■□□□□ 0.32
MCPH1-205ENST00000521175 ATG3Q9NT62 314 aa17.05■□□□□ 0.32
MCPH1-205ENST00000521175 HSP90AB1P08238 724 aaKnown RBP17.04■□□□□ 0.32
MCPH1-205ENST00000521175 YBX3P16989 372 aaKnown RBP eCLIP17.04■□□□□ 0.32
MCPH1-205ENST00000521175 AEBP1Q8IUX7 1158 aa17.04■□□□□ 0.32
MCPH1-205ENST00000521175 SSFA2P28290 1259 aa17.03■□□□□ 0.32
MCPH1-205ENST00000521175 C1orf141Q5JVX7 400 aa17.03■□□□□ 0.32
MCPH1-205ENST00000521175 WWC3Q9ULE0 1092 aa17.03■□□□□ 0.32
MCPH1-205ENST00000521175 CABP4P57796 275 aa17.02■□□□□ 0.32
MCPH1-205ENST00000521175 SULT6B1Q6IMI4 303 aa17.02■□□□□ 0.32
MCPH1-205ENST00000521175 DCAF5Q96JK2 942 aa17.02■□□□□ 0.32
MCPH1-205ENST00000521175 ERVV-2B6SEH9 535 aa17.01■□□□□ 0.31
MCPH1-205ENST00000521175 GRIN3BO60391 1043 aa17.01■□□□□ 0.31
MCPH1-205ENST00000521175 AMOTQ4VCS5 1084 aa17.01■□□□□ 0.31
MCPH1-205ENST00000521175 CD2APQ9Y5K6 639 aa17.01■□□□□ 0.31
MCPH1-205ENST00000521175 KDM6AO15550 1401 aaPredicted RBP17.01■□□□□ 0.31
MCPH1-205ENST00000521175 PLEKHG2Q9H7P9 1386 aa17.01■□□□□ 0.31
MCPH1-205ENST00000521175 KIF7Q2M1P5 1343 aa17■□□□□ 0.31
MCPH1-205ENST00000521175 MTHFSP49914 203 aa17■□□□□ 0.31
MCPH1-205ENST00000521175 CNGB1Q14028 1251 aaPredicted RBP17■□□□□ 0.31
MCPH1-205ENST00000521175 RTCBQ9Y3I0 505 aaKnown RBP16.99■□□□□ 0.31
MCPH1-205ENST00000521175 KDRP35968 1356 aa16.99■□□□□ 0.31
MCPH1-205ENST00000521175 COL5A3P25940 1745 aaPredicted RBP16.98■□□□□ 0.31
MCPH1-205ENST00000521175 PTCD1O75127 700 aaKnown RBP16.97■□□□□ 0.31
MCPH1-205ENST00000521175 IL13P35225 146 aa16.97■□□□□ 0.31
MCPH1-205ENST00000521175 CC2D1BQ5T0F9 858 aaKnown RBP16.97■□□□□ 0.31
MCPH1-205ENST00000521175 TRAPPC3LQ5T215 181 aa16.97■□□□□ 0.31
MCPH1-205ENST00000521175 SLC4A9Q96Q91 983 aa16.97■□□□□ 0.31
MCPH1-205ENST00000521175 GOLGB1Q14789 3259 aaKnown RBP16.96■□□□□ 0.31
MCPH1-205ENST00000521175 IFNLR1Q8IU57 520 aaPredicted RBP16.96■□□□□ 0.31
MCPH1-205ENST00000521175 SCN11AQ9UI33 1791 aa16.95■□□□□ 0.3
MCPH1-205ENST00000521175 ZNF831Q5JPB2 1677 aa16.95■□□□□ 0.3
MCPH1-205ENST00000521175 GIGYF1O75420 1035 aaPredicted RBP16.95■□□□□ 0.3
MCPH1-205ENST00000521175 MMP10P09238 476 aa16.95■□□□□ 0.3
MCPH1-205ENST00000521175 HMOX1P09601 288 aa16.95■□□□□ 0.3
MCPH1-205ENST00000521175 NFATC2IPQ8NCF5 419 aa16.95■□□□□ 0.3
MCPH1-205ENST00000521175 SENP3-EIF4A1A0A087X0R7 540 aa16.94■□□□□ 0.3
MCPH1-205ENST00000521175 CICQ96RK0 1608 aaPredicted RBP16.94■□□□□ 0.3
MCPH1-205ENST00000521175 RFC4P35249 363 aa16.93■□□□□ 0.3
MCPH1-205ENST00000521175 C1QTNF8P60827 252 aa16.93■□□□□ 0.3
MCPH1-205ENST00000521175 SPDYE1Q8NFV5 336 aaPredicted RBP16.93■□□□□ 0.3
MCPH1-205ENST00000521175 VIRMAQ69YN4 1812 aaKnown RBP16.93■□□□□ 0.3
MCPH1-205ENST00000521175 CNTNAP4Q9C0A0 1308 aa16.93■□□□□ 0.3
MCPH1-205ENST00000521175 C4AP0C0L4 1744 aa16.93■□□□□ 0.3
MCPH1-205ENST00000521175 RC3H1Q5TC82 1133 aaKnown RBP16.92■□□□□ 0.3
MCPH1-205ENST00000521175 REM2Q8IYK8 340 aaPredicted RBP16.92■□□□□ 0.3
MCPH1-205ENST00000521175 ARHGEF1Q92888 912 aaKnown RBP16.92■□□□□ 0.3
MCPH1-205ENST00000521175 MYH14Q7Z406 1995 aaKnown RBP16.91■□□□□ 0.3
MCPH1-205ENST00000521175 TJP1Q07157 1748 aa16.91■□□□□ 0.3
MCPH1-205ENST00000521175 ATP10DQ9P241 1426 aa16.91■□□□□ 0.3
MCPH1-205ENST00000521175 RPS6KA4O75676 772 aa16.91■□□□□ 0.3
MCPH1-205ENST00000521175 AKAP4Q5JQC9 854 aa16.91■□□□□ 0.3
MCPH1-205ENST00000521175 N4BP2Q86UW6 1770 aaPredicted RBP16.91■□□□□ 0.3
MCPH1-205ENST00000521175 DIAPH1O60610 1272 aaKnown RBP16.9■□□□□ 0.3
MCPH1-205ENST00000521175 CRKLP46109 303 aaKnown RBP16.9■□□□□ 0.3
MCPH1-205ENST00000521175 NLGN1Q8N2Q7 840 aa16.9■□□□□ 0.3
MCPH1-205ENST00000521175 ZNF526Q8TF50 670 aaPredicted RBP16.9■□□□□ 0.3
MCPH1-205ENST00000521175 LGR6Q9HBX8 967 aa16.89■□□□□ 0.29
MCPH1-205ENST00000521175 GYS1P13807 737 aa16.88■□□□□ 0.29
MCPH1-205ENST00000521175 SLC52A2Q9HAB3 445 aa16.88■□□□□ 0.29
MCPH1-205ENST00000521175 CCDC87Q9NVE4 849 aa16.88■□□□□ 0.29
MCPH1-205ENST00000521175 PARP3Q9Y6F1 533 aa16.88■□□□□ 0.29
MCPH1-205ENST00000521175 KIF13BQ9NQT8 1826 aa16.88■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms