RNA–Protein interactions for RNA: ENST00000521127.1

SNHG6-204, Transcript of small nucleolar RNA host gene 6, humanhuman

TSL 2

Gene SNHG6, Length 560 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG6-204ENST00000521127 SLC4A9Q96Q91 983 aa25.77■■□□□ 1.72
SNHG6-204ENST00000521127 IFFO2Q5TF58 517 aa25.76■■□□□ 1.71
SNHG6-204ENST00000521127 KDRP35968 1356 aa25.75■■□□□ 1.71
SNHG6-204ENST00000521127 HSPA6P17066 643 aa25.75■■□□□ 1.71
SNHG6-204ENST00000521127 TNNT2P45379 298 aaPredicted RBP25.74■■□□□ 1.71
SNHG6-204ENST00000521127 PXDNLA1KZ92 1463 aa25.72■■□□□ 1.71
SNHG6-204ENST00000521127 KIAA1551Q9HCM1 1747 aa25.72■■□□□ 1.71
SNHG6-204ENST00000521127 KIF3CO14782 793 aa25.72■■□□□ 1.71
SNHG6-204ENST00000521127 CICQ96RK0 1608 aaPredicted RBP25.72■■□□□ 1.71
SNHG6-204ENST00000521127 KIF13BQ9NQT8 1826 aa25.72■■□□□ 1.71
SNHG6-204ENST00000521127 TRAPPC3LQ5T215 181 aa25.71■■□□□ 1.71
SNHG6-204ENST00000521127 RTCBQ9Y3I0 505 aaKnown RBP25.71■■□□□ 1.71
SNHG6-204ENST00000521127 ERVV-2B6SEH9 535 aa25.7■■□□□ 1.7
SNHG6-204ENST00000521127 RBM42Q9BTD8 480 aaKnown RBP25.7■■□□□ 1.7
SNHG6-204ENST00000521127 PLEKHG2Q9H7P9 1386 aa25.69■■□□□ 1.7
SNHG6-204ENST00000521127 N4BP2Q86UW6 1770 aaPredicted RBP25.69■■□□□ 1.7
SNHG6-204ENST00000521127 ARHGEF1Q92888 912 aaKnown RBP25.69■■□□□ 1.7
SNHG6-204ENST00000521127 POLR3GLQ9BT43 218 aa25.69■■□□□ 1.7
SNHG6-204ENST00000521127 A0A0G2JLW4 131 aa25.68■■□□□ 1.7
SNHG6-204ENST00000521127 TGFB2P61812 414 aa25.68■■□□□ 1.7
SNHG6-204ENST00000521127 RC3H1Q5TC82 1133 aaKnown RBP25.68■■□□□ 1.7
SNHG6-204ENST00000521127 NLGN1Q8N2Q7 840 aa25.68■■□□□ 1.7
SNHG6-204ENST00000521127 TRIM26Q12899 539 aaPredicted RBP25.67■■□□□ 1.7
SNHG6-204ENST00000521127 C10orf71Q711Q0 1435 aa25.67■■□□□ 1.7
SNHG6-204ENST00000521127 DCAF5Q96JK2 942 aa25.67■■□□□ 1.7
SNHG6-204ENST00000521127 ZNF831Q5JPB2 1677 aa25.67■■□□□ 1.7
SNHG6-204ENST00000521127 GYS1P13807 737 aa25.66■■□□□ 1.7
SNHG6-204ENST00000521127 BCS1LQ9Y276 419 aa25.66■■□□□ 1.7
SNHG6-204ENST00000521127 COL5A3P25940 1745 aaPredicted RBP25.66■■□□□ 1.7
SNHG6-204ENST00000521127 MYH14Q7Z406 1995 aaKnown RBP25.65■■□□□ 1.7
SNHG6-204ENST00000521127 CNTNAP4Q9C0A0 1308 aa25.65■■□□□ 1.7
SNHG6-204ENST00000521127 KDM6AO15550 1401 aaPredicted RBP25.65■■□□□ 1.7
SNHG6-204ENST00000521127 RPS6KA4O75676 772 aa25.65■■□□□ 1.7
SNHG6-204ENST00000521127 TIMELESSQ9UNS1 1208 aa25.65■■□□□ 1.7
SNHG6-204ENST00000521127 HSP90AB1P08238 724 aaKnown RBP25.64■■□□□ 1.7
SNHG6-204ENST00000521127 ADRA2BP18089 450 aa25.64■■□□□ 1.7
SNHG6-204ENST00000521127 PLEKHO1Q53GL0 409 aaPredicted RBP25.64■■□□□ 1.7
SNHG6-204ENST00000521127 DPEP1P16444 411 aa25.63■■□□□ 1.69
SNHG6-204ENST00000521127 ZNF530Q6P9A1 599 aaPredicted RBP25.63■■□□□ 1.69
SNHG6-204ENST00000521127 CABP4P57796 275 aa25.62■■□□□ 1.69
SNHG6-204ENST00000521127 CCDC87Q9NVE4 849 aa25.62■■□□□ 1.69
SNHG6-204ENST00000521127 C4AP0C0L4 1744 aa25.62■■□□□ 1.69
SNHG6-204ENST00000521127 RFC4P35249 363 aa25.61■■□□□ 1.69
SNHG6-204ENST00000521127 ARHGAP27Q6ZUM4 889 aa25.6■■□□□ 1.69
SNHG6-204ENST00000521127 AEBP1Q8IUX7 1158 aa25.6■■□□□ 1.69
SNHG6-204ENST00000521127 PANK3Q9H999 370 aa25.6■■□□□ 1.69
SNHG6-204ENST00000521127 KCNA3P22001 575 aa25.59■■□□□ 1.69
SNHG6-204ENST00000521127 AMOTQ4VCS5 1084 aa25.59■■□□□ 1.69
SNHG6-204ENST00000521127 PARP3Q9Y6F1 533 aa25.59■■□□□ 1.69
SNHG6-204ENST00000521127 BRCA1P38398 1863 aaKnown RBP25.59■■□□□ 1.69
SNHG6-204ENST00000521127 PTCD1O75127 700 aaKnown RBP25.58■■□□□ 1.69
SNHG6-204ENST00000521127 FCHSD2O94868 740 aa25.58■■□□□ 1.69
SNHG6-204ENST00000521127 MTHFSP49914 203 aa25.57■■□□□ 1.68
SNHG6-204ENST00000521127 CRKLP46109 303 aaKnown RBP25.56■■□□□ 1.68
SNHG6-204ENST00000521127 NFATC2IPQ8NCF5 419 aa25.56■■□□□ 1.68
SNHG6-204ENST00000521127 NMRK2Q9NPI5 230 aa25.56■■□□□ 1.68
SNHG6-204ENST00000521127 SRP68Q9UHB9 627 aaKnown RBP25.56■■□□□ 1.68
SNHG6-204ENST00000521127 TOMM70O94826 608 aa25.54■■□□□ 1.68
SNHG6-204ENST00000521127 HSPA5P11021 654 aaKnown RBP25.53■■□□□ 1.68
SNHG6-204ENST00000521127 DDR1Q08345 913 aa25.53■■□□□ 1.68
SNHG6-204ENST00000521127 FKBP8Q14318 412 aa25.53■■□□□ 1.68
SNHG6-204ENST00000521127 C1orf141Q5JVX7 400 aa25.53■■□□□ 1.68
SNHG6-204ENST00000521127 APLP1P51693 650 aa25.52■■□□□ 1.68
SNHG6-204ENST00000521127 USP42Q9H9J4 1324 aaKnown RBP25.52■■□□□ 1.68
SNHG6-204ENST00000521127 TJP1Q07157 1748 aa25.51■■□□□ 1.68
SNHG6-204ENST00000521127 ARFGEF1Q9Y6D6 1849 aa25.51■■□□□ 1.67
SNHG6-204ENST00000521127 C9orf131Q5VYM1 1079 aa25.51■■□□□ 1.67
SNHG6-204ENST00000521127 SULT6B1Q6IMI4 303 aa25.51■■□□□ 1.67
SNHG6-204ENST00000521127 MORC1Q86VD1 984 aa25.51■■□□□ 1.67
SNHG6-204ENST00000521127 EIF4G2P78344 907 aaKnown RBP eCLIP25.5■■□□□ 1.67
SNHG6-204ENST00000521127 INTS5Q6P9B9 1019 aaKnown RBP25.5■■□□□ 1.67
SNHG6-204ENST00000521127 DNAJC5GQ8N7S2 189 aa25.5■■□□□ 1.67
SNHG6-204ENST00000521127 PIM2Q9P1W9 311 aa25.5■■□□□ 1.67
SNHG6-204ENST00000521127 CLSPNQ9HAW4 1339 aa25.48■■□□□ 1.67
SNHG6-204ENST00000521127 IL13P35225 146 aa25.48■■□□□ 1.67
SNHG6-204ENST00000521127 ADAMTS7Q9UKP4 1686 aa25.48■■□□□ 1.67
SNHG6-204ENST00000521127 SCN11AQ9UI33 1791 aa25.47■■□□□ 1.67
SNHG6-204ENST00000521127 CHRNA5P30532 468 aa25.47■■□□□ 1.67
SNHG6-204ENST00000521127 TM4SF1P30408 202 aa25.46■■□□□ 1.67
SNHG6-204ENST00000521127 DALRD3Q5D0E6 543 aaKnown RBP25.46■■□□□ 1.67
SNHG6-204ENST00000521127 POLRMTO00411 1230 aaKnown RBP25.45■■□□□ 1.66
SNHG6-204ENST00000521127 DNAJC10Q8IXB1 793 aa25.45■■□□□ 1.66
SNHG6-204ENST00000521127 PCGF6Q9BYE7 350 aa25.45■■□□□ 1.66
SNHG6-204ENST00000521127 RBM46Q8TBY0 533 aaKnown RBP25.44■■□□□ 1.66
SNHG6-204ENST00000521127 LGR6Q9HBX8 967 aa25.44■■□□□ 1.66
SNHG6-204ENST00000521127 AKAP4Q5JQC9 854 aa25.42■■□□□ 1.66
SNHG6-204ENST00000521127 USPL1Q5W0Q7 1092 aa25.42■■□□□ 1.66
SNHG6-204ENST00000521127 SLC52A2Q9HAB3 445 aa25.42■■□□□ 1.66
SNHG6-204ENST00000521127 RNF181Q9P0P0 153 aa25.42■■□□□ 1.66
SNHG6-204ENST00000521127 KCPQ6ZWJ8 1503 aa25.41■■□□□ 1.66
SNHG6-204ENST00000521127 SBF1O95248 1867 aa25.4■■□□□ 1.66
SNHG6-204ENST00000521127 SOS1Q07889 1333 aaPredicted RBP25.4■■□□□ 1.66
SNHG6-204ENST00000521127 CYP19A1P11511 503 aaPredicted RBP25.4■■□□□ 1.66
SNHG6-204ENST00000521127 KNSTRNQ9Y448 316 aa25.4■■□□□ 1.66
SNHG6-204ENST00000521127 ZPR1O75312 459 aa25.39■■□□□ 1.66
SNHG6-204ENST00000521127 HTRA3P83110 453 aa25.39■■□□□ 1.66
SNHG6-204ENST00000521127 SLC39A6Q13433 755 aa25.39■■□□□ 1.66
SNHG6-204ENST00000521127 WDR90Q96KV7 1748 aa25.38■■□□□ 1.65
SNHG6-204ENST00000521127 RNMTO43148 476 aaKnown RBP25.38■■□□□ 1.65
SNHG6-204ENST00000521127 NFIXQ14938 502 aa25.37■■□□□ 1.65
Retrieved 100 of 20,778 RNA–protein pairs in 91.5 ms