RNA–Protein interactions for RNA: ENST00000520802.5

EFCAB13-209, Transcript of EF-hand calcium binding domain 13, humanhuman

TSL 3

Gene EFCAB13, Length 568 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFCAB13-209ENST00000520802 PCGF6Q9BYE7 350 aa24.17■■□□□ 1.46
EFCAB13-209ENST00000520802 ATG3Q9NT62 314 aa24.17■■□□□ 1.46
EFCAB13-209ENST00000520802 RBM42Q9BTD8 480 aaKnown RBP24.15■■□□□ 1.46
EFCAB13-209ENST00000520802 HSP90AB1P08238 724 aaKnown RBP24.14■■□□□ 1.45
EFCAB13-209ENST00000520802 RTCBQ9Y3I0 505 aaKnown RBP24.14■■□□□ 1.45
EFCAB13-209ENST00000520802 PLEKHO1Q53GL0 409 aaPredicted RBP24.13■■□□□ 1.45
EFCAB13-209ENST00000520802 TRAPPC3LQ5T215 181 aa24.13■■□□□ 1.45
EFCAB13-209ENST00000520802 ERVV-2B6SEH9 535 aa24.12■■□□□ 1.45
EFCAB13-209ENST00000520802 MMP10P09238 476 aa24.12■■□□□ 1.45
EFCAB13-209ENST00000520802 EIF4G2P78344 907 aaKnown RBP eCLIP24.11■■□□□ 1.45
EFCAB13-209ENST00000520802 DCAF5Q96JK2 942 aa24.11■■□□□ 1.45
EFCAB13-209ENST00000520802 CLSPNQ9HAW4 1339 aa24.1■■□□□ 1.45
EFCAB13-209ENST00000520802 CABP4P57796 275 aa24.1■■□□□ 1.45
EFCAB13-209ENST00000520802 PANK3Q9H999 370 aa24.1■■□□□ 1.45
EFCAB13-209ENST00000520802 PLEKHG2Q9H7P9 1386 aa24.09■■□□□ 1.45
EFCAB13-209ENST00000520802 ZNF530Q6P9A1 599 aaPredicted RBP24.09■■□□□ 1.45
EFCAB13-209ENST00000520802 NLGN1Q8N2Q7 840 aa24.09■■□□□ 1.45
EFCAB13-209ENST00000520802 AMOTQ4VCS5 1084 aa24.08■■□□□ 1.45
EFCAB13-209ENST00000520802 RFC4P35249 363 aa24.07■■□□□ 1.44
EFCAB13-209ENST00000520802 C1orf141Q5JVX7 400 aa24.07■■□□□ 1.44
EFCAB13-209ENST00000520802 MORC1Q86VD1 984 aa24.07■■□□□ 1.44
EFCAB13-209ENST00000520802 ADCY9O60503 1353 aa24.06■■□□□ 1.44
EFCAB13-209ENST00000520802 HSPA5P11021 654 aaKnown RBP24.05■■□□□ 1.44
EFCAB13-209ENST00000520802 ADRA2BP18089 450 aa24.05■■□□□ 1.44
EFCAB13-209ENST00000520802 MTHFSP49914 203 aa24.05■■□□□ 1.44
EFCAB13-209ENST00000520802 RC3H1Q5TC82 1133 aaKnown RBP24.05■■□□□ 1.44
EFCAB13-209ENST00000520802 ARHGEF1Q92888 912 aaKnown RBP24.05■■□□□ 1.44
EFCAB13-209ENST00000520802 KDRP35968 1356 aa24.04■■□□□ 1.44
EFCAB13-209ENST00000520802 TGFB2P61812 414 aa24.04■■□□□ 1.44
EFCAB13-209ENST00000520802 CCDC87Q9NVE4 849 aa24.04■■□□□ 1.44
EFCAB13-209ENST00000520802 BCS1LQ9Y276 419 aa24.04■■□□□ 1.44
EFCAB13-209ENST00000520802 SLC4A9Q96Q91 983 aa24.03■■□□□ 1.44
EFCAB13-209ENST00000520802 PARP3Q9Y6F1 533 aa24.03■■□□□ 1.44
EFCAB13-209ENST00000520802 CNTNAP4Q9C0A0 1308 aa24.03■■□□□ 1.44
EFCAB13-209ENST00000520802 A0A0G2JLW4 131 aa24.02■■□□□ 1.44
EFCAB13-209ENST00000520802 PTCD1O75127 700 aaKnown RBP24.02■■□□□ 1.44
EFCAB13-209ENST00000520802 RPS6KA4O75676 772 aa24.02■■□□□ 1.44
EFCAB13-209ENST00000520802 CICQ96RK0 1608 aaPredicted RBP24.01■■□□□ 1.43
EFCAB13-209ENST00000520802 HSPA6P17066 643 aa24■■□□□ 1.43
EFCAB13-209ENST00000520802 KNSTRNQ9Y448 316 aa24■■□□□ 1.43
EFCAB13-209ENST00000520802 PXDNLA1KZ92 1463 aa24■■□□□ 1.43
EFCAB13-209ENST00000520802 GYS1P13807 737 aa23.99■■□□□ 1.43
EFCAB13-209ENST00000520802 SULT6B1Q6IMI4 303 aa23.99■■□□□ 1.43
EFCAB13-209ENST00000520802 ARHGAP27Q6ZUM4 889 aa23.99■■□□□ 1.43
EFCAB13-209ENST00000520802 AEBP1Q8IUX7 1158 aa23.99■■□□□ 1.43
EFCAB13-209ENST00000520802 KDM6AO15550 1401 aaPredicted RBP23.99■■□□□ 1.43
EFCAB13-209ENST00000520802 NFATC2IPQ8NCF5 419 aa23.98■■□□□ 1.43
EFCAB13-209ENST00000520802 FCHSD2O94868 740 aa23.97■■□□□ 1.43
EFCAB13-209ENST00000520802 ZNF831Q5JPB2 1677 aa23.96■■□□□ 1.43
EFCAB13-209ENST00000520802 DPEP1P16444 411 aa23.96■■□□□ 1.43
EFCAB13-209ENST00000520802 C10orf71Q711Q0 1435 aa23.95■■□□□ 1.42
EFCAB13-209ENST00000520802 CRKLP46109 303 aaKnown RBP23.95■■□□□ 1.42
EFCAB13-209ENST00000520802 N4BP2Q86UW6 1770 aaPredicted RBP23.94■■□□□ 1.42
EFCAB13-209ENST00000520802 COL5A3P25940 1745 aaPredicted RBP23.93■■□□□ 1.42
EFCAB13-209ENST00000520802 KIF3CO14782 793 aa23.93■■□□□ 1.42
EFCAB13-209ENST00000520802 KIF13BQ9NQT8 1826 aa23.93■■□□□ 1.42
EFCAB13-209ENST00000520802 C4AP0C0L4 1744 aa23.93■■□□□ 1.42
EFCAB13-209ENST00000520802 CCER1Q8TC90 406 aaPredicted RBP23.92■■□□□ 1.42
EFCAB13-209ENST00000520802 IL13P35225 146 aa23.91■■□□□ 1.42
EFCAB13-209ENST00000520802 SRP68Q9UHB9 627 aaKnown RBP23.91■■□□□ 1.42
EFCAB13-209ENST00000520802 AKAP4Q5JQC9 854 aa23.9■■□□□ 1.42
EFCAB13-209ENST00000520802 PIM2Q9P1W9 311 aa23.9■■□□□ 1.42
EFCAB13-209ENST00000520802 USP42Q9H9J4 1324 aaKnown RBP23.89■■□□□ 1.42
EFCAB13-209ENST00000520802 FKBP8Q14318 412 aa23.89■■□□□ 1.41
EFCAB13-209ENST00000520802 IFFO2Q5TF58 517 aa23.89■■□□□ 1.41
EFCAB13-209ENST00000520802 ZPR1O75312 459 aa23.88■■□□□ 1.41
EFCAB13-209ENST00000520802 KIAA1551Q9HCM1 1747 aa23.87■■□□□ 1.41
EFCAB13-209ENST00000520802 DALRD3Q5D0E6 543 aaKnown RBP23.87■■□□□ 1.41
EFCAB13-209ENST00000520802 MYH14Q7Z406 1995 aaKnown RBP23.87■■□□□ 1.41
EFCAB13-209ENST00000520802 TOMM70O94826 608 aa23.86■■□□□ 1.41
EFCAB13-209ENST00000520802 SLC52A2Q9HAB3 445 aa23.86■■□□□ 1.41
EFCAB13-209ENST00000520802 KCNA3P22001 575 aa23.85■■□□□ 1.41
EFCAB13-209ENST00000520802 C9orf131Q5VYM1 1079 aa23.85■■□□□ 1.41
EFCAB13-209ENST00000520802 INTS5Q6P9B9 1019 aaKnown RBP23.85■■□□□ 1.41
EFCAB13-209ENST00000520802 DNAJC10Q8IXB1 793 aa23.85■■□□□ 1.41
EFCAB13-209ENST00000520802 C16orf71Q8IYS4 520 aaPredicted RBP23.85■■□□□ 1.41
EFCAB13-209ENST00000520802 CEP350Q5VT06 3117 aa23.85■■□□□ 1.41
EFCAB13-209ENST00000520802 HMOX1P09601 288 aa23.84■■□□□ 1.41
EFCAB13-209ENST00000520802 APLP1P51693 650 aa23.84■■□□□ 1.41
EFCAB13-209ENST00000520802 DDR1Q08345 913 aa23.84■■□□□ 1.41
EFCAB13-209ENST00000520802 LGR6Q9HBX8 967 aa23.84■■□□□ 1.41
EFCAB13-209ENST00000520802 USPL1Q5W0Q7 1092 aa23.83■■□□□ 1.41
EFCAB13-209ENST00000520802 NMRK2Q9NPI5 230 aa23.83■■□□□ 1.41
EFCAB13-209ENST00000520802 AMER1Q5JTC6 1135 aaPredicted RBP23.82■■□□□ 1.4
EFCAB13-209ENST00000520802 SCN11AQ9UI33 1791 aa23.81■■□□□ 1.4
EFCAB13-209ENST00000520802 RNMTO43148 476 aaKnown RBP23.81■■□□□ 1.4
EFCAB13-209ENST00000520802 CHRNA5P30532 468 aa23.81■■□□□ 1.4
EFCAB13-209ENST00000520802 SLC39A6Q13433 755 aa23.81■■□□□ 1.4
EFCAB13-209ENST00000520802 TJP1Q07157 1748 aa23.81■■□□□ 1.4
EFCAB13-209ENST00000520802 POLRMTO00411 1230 aaKnown RBP23.8■■□□□ 1.4
EFCAB13-209ENST00000520802 RNF181Q9P0P0 153 aa23.8■■□□□ 1.4
EFCAB13-209ENST00000520802 TM4SF1P30408 202 aa23.79■■□□□ 1.4
EFCAB13-209ENST00000520802 SOS1Q07889 1333 aaPredicted RBP23.79■■□□□ 1.4
EFCAB13-209ENST00000520802 KDM2BQ8NHM5 1336 aa23.79■■□□□ 1.4
EFCAB13-209ENST00000520802 DIAPH1O60610 1272 aaKnown RBP23.78■■□□□ 1.4
EFCAB13-209ENST00000520802 CYP19A1P11511 503 aaPredicted RBP23.78■■□□□ 1.4
EFCAB13-209ENST00000520802 BRCA1P38398 1863 aaKnown RBP23.78■■□□□ 1.4
EFCAB13-209ENST00000520802 CC2D1BQ5T0F9 858 aaKnown RBP23.77■■□□□ 1.4
EFCAB13-209ENST00000520802 ARFGEF1Q9Y6D6 1849 aa23.76■■□□□ 1.39
EFCAB13-209ENST00000520802 MTHFSDQ2M296 383 aaKnown RBP23.76■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms