RNA–Protein interactions for RNA: ENST00000520608.2

ZNF260-201, Transcript of zinc finger protein 260, humanhuman

TSL 3

Gene ZNF260, Length 330 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF260-201ENST00000520608 INSRP06213 1382 aa11.84□□□□□ -0.51
ZNF260-201ENST00000520608 NSD3Q9BZ95 1437 aa11.84□□□□□ -0.51
ZNF260-201ENST00000520608 PPM1GO15355 546 aaPredicted RBP11.83□□□□□ -0.52
ZNF260-201ENST00000520608 TRIM26Q12899 539 aaPredicted RBP11.83□□□□□ -0.52
ZNF260-201ENST00000520608 MSL1Q68DK7 614 aa11.82□□□□□ -0.52
ZNF260-201ENST00000520608 MPRIPQ6WCQ1 1025 aa11.82□□□□□ -0.52
ZNF260-201ENST00000520608 METRNQ9UJH8 293 aa11.82□□□□□ -0.52
ZNF260-201ENST00000520608 EMILIN1Q9Y6C2 1016 aa11.82□□□□□ -0.52
ZNF260-201ENST00000520608 CHD4Q14839 1912 aa11.82□□□□□ -0.52
ZNF260-201ENST00000520608 C5P01031 1676 aa11.81□□□□□ -0.52
ZNF260-201ENST00000520608 KIF24Q5T7B8 1368 aa11.81□□□□□ -0.52
ZNF260-201ENST00000520608 PALLDQ8WX93 1383 aa11.81□□□□□ -0.52
ZNF260-201ENST00000520608 NLGN2Q8NFZ4 835 aa11.81□□□□□ -0.52
ZNF260-201ENST00000520608 COL24A1Q17RW2 1714 aa11.8□□□□□ -0.52
ZNF260-201ENST00000520608 COL23A1Q86Y22 540 aaPredicted RBP11.8□□□□□ -0.52
ZNF260-201ENST00000520608 POLR3GLQ9BT43 218 aa11.8□□□□□ -0.52
ZNF260-201ENST00000520608 CARD14Q9BXL6 1004 aa11.8□□□□□ -0.52
ZNF260-201ENST00000520608 CYP27B1O15528 508 aa11.79□□□□□ -0.52
ZNF260-201ENST00000520608 MAMSTRQ6ZN01 415 aa11.79□□□□□ -0.52
ZNF260-201ENST00000520608 GOLGB1Q14789 3259 aaKnown RBP11.79□□□□□ -0.52
ZNF260-201ENST00000520608 TOGARAM1Q9Y4F4 1720 aa11.78□□□□□ -0.52
ZNF260-201ENST00000520608 SLC39A7Q92504 469 aa11.78□□□□□ -0.52
ZNF260-201ENST00000520608 AK7Q96M32 723 aa11.78□□□□□ -0.52
ZNF260-201ENST00000520608 PKD1L3Q7Z443 1732 aa11.77□□□□□ -0.52
ZNF260-201ENST00000520608 C7P10643 843 aa11.77□□□□□ -0.53
ZNF260-201ENST00000520608 HMGB2P26583 209 aaKnown RBP11.77□□□□□ -0.53
ZNF260-201ENST00000520608 SMARCC1Q92922 1105 aaPredicted RBP11.77□□□□□ -0.53
ZNF260-201ENST00000520608 SPG7Q9UQ90 795 aa11.77□□□□□ -0.53
ZNF260-201ENST00000520608 SENP3-EIF4A1A0A087X0R7 540 aa11.76□□□□□ -0.53
ZNF260-201ENST00000520608 PHF14O94880 888 aa11.76□□□□□ -0.53
ZNF260-201ENST00000520608 TNNT2P45379 298 aaPredicted RBP11.76□□□□□ -0.53
ZNF260-201ENST00000520608 ASTLQ6HA08 431 aaPredicted RBP11.76□□□□□ -0.53
ZNF260-201ENST00000520608 FLAD1Q8NFF5 587 aa11.76□□□□□ -0.53
ZNF260-201ENST00000520608 C4BP0C0L5 1744 aa11.76□□□□□ -0.53
ZNF260-201ENST00000520608 ANKRD26Q9UPS8 1709 aa11.76□□□□□ -0.53
ZNF260-201ENST00000520608 ITGB4P16144 1822 aa11.76□□□□□ -0.53
ZNF260-201ENST00000520608 TAF1LQ8IZX4 1826 aa11.76□□□□□ -0.53
ZNF260-201ENST00000520608 GIGYF1O75420 1035 aaPredicted RBP11.75□□□□□ -0.53
ZNF260-201ENST00000520608 YBX3P16989 372 aaKnown RBP eCLIP11.75□□□□□ -0.53
ZNF260-201ENST00000520608 MNX1P50219 401 aaPredicted RBP11.75□□□□□ -0.53
ZNF260-201ENST00000520608 C1QTNF8P60827 252 aa11.75□□□□□ -0.53
ZNF260-201ENST00000520608 PIGBQ92521 554 aa11.75□□□□□ -0.53
ZNF260-201ENST00000520608 WASHC2AQ641Q2 1341 aa11.75□□□□□ -0.53
ZNF260-201ENST00000520608 GRIN3BO60391 1043 aa11.74□□□□□ -0.53
ZNF260-201ENST00000520608 EYA1Q99502 592 aa11.74□□□□□ -0.53
ZNF260-201ENST00000520608 PCGF6Q9BYE7 350 aa11.74□□□□□ -0.53
ZNF260-201ENST00000520608 TMOD3Q9NYL9 352 aa11.74□□□□□ -0.53
ZNF260-201ENST00000520608 NCAPD2Q15021 1401 aa11.74□□□□□ -0.53
ZNF260-201ENST00000520608 NKX1-1Q15270 411 aaPredicted RBP11.73□□□□□ -0.53
ZNF260-201ENST00000520608 SMIM5Q71RC9 77 aa11.73□□□□□ -0.53
ZNF260-201ENST00000520608 POLKQ9UBT6 870 aa11.73□□□□□ -0.53
ZNF260-201ENST00000520608 TIMELESSQ9UNS1 1208 aa11.73□□□□□ -0.53
ZNF260-201ENST00000520608 MAP2P11137 1827 aaKnown RBP11.72□□□□□ -0.53
ZNF260-201ENST00000520608 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.72□□□□□ -0.53
ZNF260-201ENST00000520608 LOC102724428A0A0B4J2F2 783 aa11.72□□□□□ -0.53
ZNF260-201ENST00000520608 ATMINO43313 823 aaPredicted RBP11.72□□□□□ -0.53
ZNF260-201ENST00000520608 SIK1P57059 783 aa11.72□□□□□ -0.53
ZNF260-201ENST00000520608 AMIGO3Q86WK7 504 aa11.72□□□□□ -0.53
ZNF260-201ENST00000520608 IFNL2Q8IZJ0 200 aa11.72□□□□□ -0.53
ZNF260-201ENST00000520608 MS4A3Q96HJ5 214 aa11.72□□□□□ -0.53
ZNF260-201ENST00000520608 CD2APQ9Y5K6 639 aa11.72□□□□□ -0.53
ZNF260-201ENST00000520608 GNPATO15228 680 aa11.71□□□□□ -0.53
ZNF260-201ENST00000520608 POTEJP0CG39 1038 aa11.71□□□□□ -0.53
ZNF260-201ENST00000520608 PHKG2P15735 406 aa11.71□□□□□ -0.53
ZNF260-201ENST00000520608 EIF4A2Q14240 407 aaKnown RBP11.71□□□□□ -0.53
ZNF260-201ENST00000520608 LINC00116Q8NCU8 138 aa11.71□□□□□ -0.53
ZNF260-201ENST00000520608 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.71□□□□□ -0.53
ZNF260-201ENST00000520608 WWC3Q9ULE0 1092 aa11.71□□□□□ -0.53
ZNF260-201ENST00000520608 ASAP1Q9ULH1 1129 aa11.71□□□□□ -0.53
ZNF260-201ENST00000520608 UBR3Q6ZT12 1888 aa11.71□□□□□ -0.53
ZNF260-201ENST00000520608 SSFA2P28290 1259 aa11.7□□□□□ -0.54
ZNF260-201ENST00000520608 ATP6V1AP38606 617 aa11.7□□□□□ -0.54
ZNF260-201ENST00000520608 FAM163AQ96GL9 167 aaPredicted RBP11.7□□□□□ -0.54
ZNF260-201ENST00000520608 SCUBE2Q9NQ36 999 aa11.7□□□□□ -0.54
ZNF260-201ENST00000520608 CLSPNQ9HAW4 1339 aa11.69□□□□□ -0.54
ZNF260-201ENST00000520608 ITPK1Q13572 414 aa11.69□□□□□ -0.54
ZNF260-201ENST00000520608 ATP10DQ9P241 1426 aa11.69□□□□□ -0.54
ZNF260-201ENST00000520608 IGSF1Q8N6C5 1336 aa11.68□□□□□ -0.54
ZNF260-201ENST00000520608 EIF4G2P78344 907 aaKnown RBP eCLIP11.68□□□□□ -0.54
ZNF260-201ENST00000520608 ATG3Q9NT62 314 aa11.68□□□□□ -0.54
ZNF260-201ENST00000520608 HSPA5P11021 654 aaKnown RBP11.67□□□□□ -0.54
ZNF260-201ENST00000520608 ZNF526Q8TF50 670 aaPredicted RBP11.67□□□□□ -0.54
ZNF260-201ENST00000520608 PANK3Q9H999 370 aa11.67□□□□□ -0.54
ZNF260-201ENST00000520608 HSP90AB1P08238 724 aaKnown RBP11.66□□□□□ -0.54
ZNF260-201ENST00000520608 LCE2DQ5TA82 110 aaPredicted RBP11.66□□□□□ -0.54
ZNF260-201ENST00000520608 ZNF530Q6P9A1 599 aaPredicted RBP11.66□□□□□ -0.54
ZNF260-201ENST00000520608 GPBP1L1Q9HC44 474 aaPredicted RBP11.66□□□□□ -0.54
ZNF260-201ENST00000520608 PLEKHG2Q9H7P9 1386 aa11.66□□□□□ -0.54
ZNF260-201ENST00000520608 ERVV-2B6SEH9 535 aa11.65□□□□□ -0.54
ZNF260-201ENST00000520608 MMP10P09238 476 aa11.65□□□□□ -0.54
ZNF260-201ENST00000520608 PLEKHO1Q53GL0 409 aaPredicted RBP11.65□□□□□ -0.54
ZNF260-201ENST00000520608 MORC1Q86VD1 984 aa11.65□□□□□ -0.54
ZNF260-201ENST00000520608 DCAF5Q96JK2 942 aa11.65□□□□□ -0.54
ZNF260-201ENST00000520608 RTCBQ9Y3I0 505 aaKnown RBP11.65□□□□□ -0.54
ZNF260-201ENST00000520608 KDRP35968 1356 aa11.65□□□□□ -0.55
ZNF260-201ENST00000520608 CABP4P57796 275 aa11.64□□□□□ -0.55
ZNF260-201ENST00000520608 TRAPPC3LQ5T215 181 aa11.64□□□□□ -0.55
ZNF260-201ENST00000520608 CICQ96RK0 1608 aaPredicted RBP11.64□□□□□ -0.55
ZNF260-201ENST00000520608 KDM6AO15550 1401 aaPredicted RBP11.63□□□□□ -0.55
ZNF260-201ENST00000520608 AMOTQ4VCS5 1084 aa11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms