RNA–Protein interactions for RNA: ENST00000520417.1

SKP1-207, Transcript of S-phase kinase associated protein 1, humanhuman

TSL 3

Gene SKP1, Length 610 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-207ENST00000520417 DBN1Q16643 649 aa9.39□□□□□ -0.91
SKP1-207ENST00000520417 TRIM22Q8IYM9 498 aa9.39□□□□□ -0.91
SKP1-207ENST00000520417 NOD1Q9Y239 953 aa9.39□□□□□ -0.91
SKP1-207ENST00000520417 INHAP05111 366 aa9.38□□□□□ -0.91
SKP1-207ENST00000520417 LORP23490 312 aaPredicted RBP9.38□□□□□ -0.91
SKP1-207ENST00000520417 PROSER2Q86WR7 435 aaPredicted RBP9.38□□□□□ -0.91
SKP1-207ENST00000520417 GTPBP3Q969Y2 492 aaKnown RBP9.38□□□□□ -0.91
SKP1-207ENST00000520417 ZNF837Q96EG3 531 aaPredicted RBP9.38□□□□□ -0.91
SKP1-207ENST00000520417 FHDC1Q9C0D6 1143 aaPredicted RBP9.38□□□□□ -0.91
SKP1-207ENST00000520417 USP17L5A8MUK1 530 aa9.37□□□□□ -0.91
SKP1-207ENST00000520417 F11P03951 625 aa9.37□□□□□ -0.91
SKP1-207ENST00000520417 SCNN1DP51172 638 aa9.37□□□□□ -0.91
SKP1-207ENST00000520417 C4orf17Q53FE4 359 aa9.37□□□□□ -0.91
SKP1-207ENST00000520417 ADAMTS19Q8TE59 1207 aa9.37□□□□□ -0.91
SKP1-207ENST00000520417 HRH3Q9Y5N1 445 aa9.37□□□□□ -0.91
SKP1-207ENST00000520417 GTF2IP78347 998 aa9.36□□□□□ -0.91
SKP1-207ENST00000520417 WDR44Q5JSH3 913 aa9.36□□□□□ -0.91
SKP1-207ENST00000520417 RHBDD1Q8TEB9 315 aa9.36□□□□□ -0.91
SKP1-207ENST00000520417 AIDAQ96BJ3 306 aa9.36□□□□□ -0.91
SKP1-207ENST00000520417 NUCKS1Q9H1E3 243 aaKnown RBP9.36□□□□□ -0.91
SKP1-207ENST00000520417 CSB-PGBD3P0DP91 1061 aa9.35□□□□□ -0.91
SKP1-207ENST00000520417 PLA2G4AP47712 749 aa9.35□□□□□ -0.91
SKP1-207ENST00000520417 PGBD3Q8N328 593 aa9.35□□□□□ -0.91
SKP1-207ENST00000520417 NFATC2IPQ8NCF5 419 aa9.35□□□□□ -0.91
SKP1-207ENST00000520417 TRERF1Q96PN7 1200 aa9.35□□□□□ -0.91
SKP1-207ENST00000520417 A0A1B0GTH6 734 aa9.34□□□□□ -0.91
SKP1-207ENST00000520417 LZTS3O60299 673 aaPredicted RBP9.34□□□□□ -0.91
SKP1-207ENST00000520417 SMTNP53814 917 aa9.34□□□□□ -0.91
SKP1-207ENST00000520417 TBC1D9Q6ZT07 1266 aa9.34□□□□□ -0.91
SKP1-207ENST00000520417 PPARGC1BQ86YN6 1023 aaKnown RBP9.34□□□□□ -0.91
SKP1-207ENST00000520417 SVOPQ8N4V2 548 aa9.34□□□□□ -0.91
SKP1-207ENST00000520417 GMCL1Q96IK5 515 aa9.34□□□□□ -0.91
SKP1-207ENST00000520417 RUBCNLQ9H714 662 aa9.34□□□□□ -0.91
SKP1-207ENST00000520417 PCDHGA11Q9Y5H2 935 aa9.34□□□□□ -0.91
SKP1-207ENST00000520417 TMEM229AB2RXF0 380 aa9.33□□□□□ -0.92
SKP1-207ENST00000520417 GLMNQ92990 594 aa9.33□□□□□ -0.92
SKP1-207ENST00000520417 USP17L3A6NCW0 530 aa9.32□□□□□ -0.92
SKP1-207ENST00000520417 USP17L4A6NCW7 530 aa9.32□□□□□ -0.92
SKP1-207ENST00000520417 MSX1P28360 303 aa9.32□□□□□ -0.92
SKP1-207ENST00000520417 USP17L2Q6R6M4 530 aa9.32□□□□□ -0.92
SKP1-207ENST00000520417 USP17L1Q7RTZ2 530 aa9.32□□□□□ -0.92
SKP1-207ENST00000520417 SERBP1Q8NC51 408 aaKnown RBP eCLIP9.32□□□□□ -0.92
SKP1-207ENST00000520417 ATP9BO43861 1147 aa9.31□□□□□ -0.92
SKP1-207ENST00000520417 ADAMTS2O95450 1211 aa9.31□□□□□ -0.92
SKP1-207ENST00000520417 GAS6Q14393 721 aa9.31□□□□□ -0.92
SKP1-207ENST00000520417 CALR3Q96L12 384 aaKnown RBP9.31□□□□□ -0.92
SKP1-207ENST00000520417 UCN2Q96RP3 112 aa9.31□□□□□ -0.92
SKP1-207ENST00000520417 NIFKQ9BYG3 293 aaKnown RBP9.31□□□□□ -0.92
SKP1-207ENST00000520417 CABP1Q9NZU7 370 aa9.31□□□□□ -0.92
SKP1-207ENST00000520417 A6NJY4 79 aa9.3□□□□□ -0.92
SKP1-207ENST00000520417 BACH1O14867 736 aa9.3□□□□□ -0.92
SKP1-207ENST00000520417 TRIM50Q86XT4 487 aa9.3□□□□□ -0.92
SKP1-207ENST00000520417 WHAMMQ8TF30 809 aa9.3□□□□□ -0.92
SKP1-207ENST00000520417 EFHC2Q5JST6 749 aa9.29□□□□□ -0.92
SKP1-207ENST00000520417 FNBP4Q8N3X1 1017 aaPredicted RBP9.29□□□□□ -0.92
SKP1-207ENST00000520417 TPCN2Q8NHX9 752 aa9.29□□□□□ -0.92
SKP1-207ENST00000520417 MBIPQ9NS73 344 aa9.29□□□□□ -0.92
SKP1-207ENST00000520417 ZNF358Q9NW07 568 aa9.29□□□□□ -0.92
SKP1-207ENST00000520417 MX2P20592 715 aa9.28□□□□□ -0.92
SKP1-207ENST00000520417 ATP1A2P50993 1020 aa9.28□□□□□ -0.92
SKP1-207ENST00000520417 SRSF11Q05519 484 aaKnown RBP9.28□□□□□ -0.92
SKP1-207ENST00000520417 ZNF385CQ66K41 422 aaPredicted RBP9.28□□□□□ -0.92
SKP1-207ENST00000520417 TFIP11Q9UBB9 837 aaKnown RBP9.28□□□□□ -0.92
SKP1-207ENST00000520417 MKRN1Q9UHC7 482 aaKnown RBP9.28□□□□□ -0.92
SKP1-207ENST00000520417 RBM19Q9Y4C8 960 aaKnown RBP9.28□□□□□ -0.92
SKP1-207ENST00000520417 PARP3Q9Y6F1 533 aa9.28□□□□□ -0.92
SKP1-207ENST00000520417 IGF1RP08069 1367 aa9.27□□□□□ -0.93
SKP1-207ENST00000520417 SLURP2P0DP57 97 aa9.27□□□□□ -0.93
SKP1-207ENST00000520417 MAP3K10Q02779 954 aa9.27□□□□□ -0.93
SKP1-207ENST00000520417 ARSJQ5FYB0 599 aaPredicted RBP9.27□□□□□ -0.93
SKP1-207ENST00000520417 ZNF594Q96JF6 807 aaPredicted RBP9.27□□□□□ -0.93
SKP1-207ENST00000520417 SLC4A9Q96Q91 983 aa9.27□□□□□ -0.93
SKP1-207ENST00000520417 DNAAF2Q9NVR5 837 aaKnown RBP9.27□□□□□ -0.93
SKP1-207ENST00000520417 USP3Q9Y6I4 520 aa9.27□□□□□ -0.93
SKP1-207ENST00000520417 A6NJR5 290 aa9.26□□□□□ -0.93
SKP1-207ENST00000520417 CDK2AP1O14519 115 aa9.26□□□□□ -0.93
SKP1-207ENST00000520417 NBPF1Q3BBV0 1214 aa9.26□□□□□ -0.93
SKP1-207ENST00000520417 TBCELQ5QJ74 424 aa9.26□□□□□ -0.93
SKP1-207ENST00000520417 CCDC102BQ68D86 513 aa9.26□□□□□ -0.93
SKP1-207ENST00000520417 LYPD4Q6UWN0 246 aa9.26□□□□□ -0.93
SKP1-207ENST00000520417 PLEKHM2Q8IWE5 1019 aa9.26□□□□□ -0.93
SKP1-207ENST00000520417 TNS4Q8IZW8 715 aa9.26□□□□□ -0.93
SKP1-207ENST00000520417 OGFOD1Q8N543 542 aa9.26□□□□□ -0.93
SKP1-207ENST00000520417 NSFL1CQ9UNZ2 370 aaKnown RBP9.26□□□□□ -0.93
SKP1-207ENST00000520417 PHF24Q9UPV7 400 aa9.26□□□□□ -0.93
SKP1-207ENST00000520417 CLDN10P78369 228 aa9.25□□□□□ -0.93
SKP1-207ENST00000520417 ZNF777Q9ULD5 760 aaPredicted RBP9.25□□□□□ -0.93
SKP1-207ENST00000520417 ADAMTS8Q9UP79 889 aa9.25□□□□□ -0.93
SKP1-207ENST00000520417 KIAA1024Q9UPX6 916 aa9.25□□□□□ -0.93
SKP1-207ENST00000520417 THBS1P07996 1170 aa9.24□□□□□ -0.93
SKP1-207ENST00000520417 TATP17735 454 aaPredicted RBP9.24□□□□□ -0.93
SKP1-207ENST00000520417 MTFR1Q15390 333 aa9.24□□□□□ -0.93
SKP1-207ENST00000520417 BICDL1Q6ZP65 573 aa9.24□□□□□ -0.93
SKP1-207ENST00000520417 ZNF232Q9UNY5 417 aa9.24□□□□□ -0.93
SKP1-207ENST00000520417 GJA3Q9Y6H8 435 aa9.24□□□□□ -0.93
SKP1-207ENST00000520417 RASA1P20936 1047 aa9.23□□□□□ -0.93
SKP1-207ENST00000520417 MARSP56192 900 aaKnown RBP9.23□□□□□ -0.93
SKP1-207ENST00000520417 ABHD17AQ96GS6 310 aa9.23□□□□□ -0.93
SKP1-207ENST00000520417 SCHIP1Q9P0W5 487 aaPredicted RBP9.23□□□□□ -0.93
SKP1-207ENST00000520417 PALM3A6NDB9 673 aaPredicted RBP9.22□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 98.1 ms