RNA–Protein interactions for RNA: ENST00000520410.2

IGHV3-42-201, Transcript of immunoglobulin heavy variable 3-42 (pseudogene), humanhuman

BASIC

Gene IGHV3-42, Length 361 nt, Biotype IG V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV3-42-201ENST00000520410 LINC00116Q8NCU8 138 aa21.86■■□□□ 1.09
IGHV3-42-201ENST00000520410 ATG3Q9NT62 314 aa21.86■■□□□ 1.09
IGHV3-42-201ENST00000520410 PLEKHG2Q9H7P9 1386 aa21.86■■□□□ 1.09
IGHV3-42-201ENST00000520410 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP21.85■■□□□ 1.09
IGHV3-42-201ENST00000520410 HMOX1P09601 288 aa21.85■■□□□ 1.09
IGHV3-42-201ENST00000520410 IL13P35225 146 aa21.85■■□□□ 1.09
IGHV3-42-201ENST00000520410 MAP3K5Q99683 1374 aa21.85■■□□□ 1.09
IGHV3-42-201ENST00000520410 ERVV-2B6SEH9 535 aa21.84■■□□□ 1.09
IGHV3-42-201ENST00000520410 NLGN2Q8NFZ4 835 aa21.84■■□□□ 1.09
IGHV3-42-201ENST00000520410 ITPK1Q13572 414 aa21.83■■□□□ 1.09
IGHV3-42-201ENST00000520410 KDM6AO15550 1401 aaPredicted RBP21.82■■□□□ 1.08
IGHV3-42-201ENST00000520410 DIAPH1O60610 1272 aaKnown RBP21.82■■□□□ 1.08
IGHV3-42-201ENST00000520410 SSFA2P28290 1259 aa21.81■■□□□ 1.08
IGHV3-42-201ENST00000520410 U2SURPO15042 1029 aaKnown RBP21.8■■□□□ 1.08
IGHV3-42-201ENST00000520410 PTCD1O75127 700 aaKnown RBP21.8■■□□□ 1.08
IGHV3-42-201ENST00000520410 AMIGO3Q86WK7 504 aa21.8■■□□□ 1.08
IGHV3-42-201ENST00000520410 COL24A1Q17RW2 1714 aa21.78■■□□□ 1.08
IGHV3-42-201ENST00000520410 PER1O15534 1290 aaPredicted RBP21.78■■□□□ 1.08
IGHV3-42-201ENST00000520410 RTCBQ9Y3I0 505 aaKnown RBP21.78■■□□□ 1.08
IGHV3-42-201ENST00000520410 UBR3Q6ZT12 1888 aa21.77■■□□□ 1.08
IGHV3-42-201ENST00000520410 KDRP35968 1356 aa21.77■■□□□ 1.08
IGHV3-42-201ENST00000520410 NFATC2IPQ8NCF5 419 aa21.77■■□□□ 1.08
IGHV3-42-201ENST00000520410 AKAP4Q5JQC9 854 aa21.76■■□□□ 1.07
IGHV3-42-201ENST00000520410 WWC3Q9ULE0 1092 aa21.75■■□□□ 1.07
IGHV3-42-201ENST00000520410 TRAPPC3LQ5T215 181 aa21.74■■□□□ 1.07
IGHV3-42-201ENST00000520410 CFAP53Q96M91 514 aa21.72■■□□□ 1.07
IGHV3-42-201ENST00000520410 SLC4A9Q96Q91 983 aa21.72■■□□□ 1.07
IGHV3-42-201ENST00000520410 RFC4P35249 363 aa21.71■■□□□ 1.07
IGHV3-42-201ENST00000520410 CD2APQ9Y5K6 639 aa21.71■■□□□ 1.07
IGHV3-42-201ENST00000520410 MTHFSDQ2M296 383 aaKnown RBP21.7■■□□□ 1.06
IGHV3-42-201ENST00000520410 LGR6Q9HBX8 967 aa21.7■■□□□ 1.06
IGHV3-42-201ENST00000520410 NPC1L1Q9UHC9 1359 aa21.7■■□□□ 1.06
IGHV3-42-201ENST00000520410 RNMTO43148 476 aaKnown RBP21.69■■□□□ 1.06
IGHV3-42-201ENST00000520410 GRIN3BO60391 1043 aa21.69■■□□□ 1.06
IGHV3-42-201ENST00000520410 MMP10P09238 476 aa21.69■■□□□ 1.06
IGHV3-42-201ENST00000520410 ZNF784Q8NCA9 323 aaPredicted RBP21.69■■□□□ 1.06
IGHV3-42-201ENST00000520410 SLC52A2Q9HAB3 445 aa21.69■■□□□ 1.06
IGHV3-42-201ENST00000520410 CNTNAP4Q9C0A0 1308 aa21.69■■□□□ 1.06
IGHV3-42-201ENST00000520410 SCN11AQ9UI33 1791 aa21.69■■□□□ 1.06
IGHV3-42-201ENST00000520410 YBX3P16989 372 aaKnown RBP eCLIP21.68■■□□□ 1.06
IGHV3-42-201ENST00000520410 COL5A3P25940 1745 aaPredicted RBP21.67■■□□□ 1.06
IGHV3-42-201ENST00000520410 CRKLP46109 303 aaKnown RBP21.67■■□□□ 1.06
IGHV3-42-201ENST00000520410 SLC39A6Q13433 755 aa21.67■■□□□ 1.06
IGHV3-42-201ENST00000520410 RC3H1Q5TC82 1133 aaKnown RBP21.67■■□□□ 1.06
IGHV3-42-201ENST00000520410 ARHGEF1Q92888 912 aaKnown RBP21.67■■□□□ 1.06
IGHV3-42-201ENST00000520410 RPS6KA4O75676 772 aa21.66■■□□□ 1.06
IGHV3-42-201ENST00000520410 ADRA2BP18089 450 aa21.66■■□□□ 1.06
IGHV3-42-201ENST00000520410 CHD4Q14839 1912 aa21.66■■□□□ 1.06
IGHV3-42-201ENST00000520410 ZNF831Q5JPB2 1677 aa21.66■■□□□ 1.06
IGHV3-42-201ENST00000520410 COL3A1P02461 1466 aaPredicted RBP21.65■■□□□ 1.06
IGHV3-42-201ENST00000520410 TTC5Q8N0Z6 440 aa21.65■■□□□ 1.06
IGHV3-42-201ENST00000520410 NLGN1Q8N2Q7 840 aa21.65■■□□□ 1.06
IGHV3-42-201ENST00000520410 TEFQ10587 303 aa21.64■■□□□ 1.05
IGHV3-42-201ENST00000520410 DNAJC10Q8IXB1 793 aa21.64■■□□□ 1.05
IGHV3-42-201ENST00000520410 GAS2L2Q8NHY3 880 aa21.64■■□□□ 1.05
IGHV3-42-201ENST00000520410 NUDCQ9Y266 331 aa21.64■■□□□ 1.05
IGHV3-42-201ENST00000520410 PARP3Q9Y6F1 533 aa21.64■■□□□ 1.05
IGHV3-42-201ENST00000520410 CICQ96RK0 1608 aaPredicted RBP21.63■■□□□ 1.05
IGHV3-42-201ENST00000520410 TJP1Q07157 1748 aa21.63■■□□□ 1.05
IGHV3-42-201ENST00000520410 MRC1P22897 1456 aa21.61■■□□□ 1.05
IGHV3-42-201ENST00000520410 GNAT3A8MTJ3 354 aa21.61■■□□□ 1.05
IGHV3-42-201ENST00000520410 PRKAR2BP31323 418 aa21.61■■□□□ 1.05
IGHV3-42-201ENST00000520410 CCDC87Q9NVE4 849 aa21.61■■□□□ 1.05
IGHV3-42-201ENST00000520410 SRP68Q9UHB9 627 aaKnown RBP21.61■■□□□ 1.05
IGHV3-42-201ENST00000520410 U2AF1L5P0DN76 240 aaPredicted RBP21.6■■□□□ 1.05
IGHV3-42-201ENST00000520410 GYS1P13807 737 aa21.6■■□□□ 1.05
IGHV3-42-201ENST00000520410 U2AF1Q01081 240 aaKnown RBP eCLIP21.6■■□□□ 1.05
IGHV3-42-201ENST00000520410 VIRMAQ69YN4 1812 aaKnown RBP21.59■■□□□ 1.05
IGHV3-42-201ENST00000520410 ZPR1O75312 459 aa21.59■■□□□ 1.05
IGHV3-42-201ENST00000520410 C4AP0C0L4 1744 aa21.59■■□□□ 1.05
IGHV3-42-201ENST00000520410 PPP2R1AP30153 589 aa21.59■■□□□ 1.05
IGHV3-42-201ENST00000520410 ZNF330Q9Y3S2 320 aaPredicted RBP21.57■■□□□ 1.04
IGHV3-42-201ENST00000520410 USP42Q9H9J4 1324 aaKnown RBP21.56■■□□□ 1.04
IGHV3-42-201ENST00000520410 INTS5Q6P9B9 1019 aaKnown RBP21.56■■□□□ 1.04
IGHV3-42-201ENST00000520410 BCS1LQ9Y276 419 aa21.56■■□□□ 1.04
IGHV3-42-201ENST00000520410 KCPQ6ZWJ8 1503 aa21.55■■□□□ 1.04
IGHV3-42-201ENST00000520410 CANXP27824 592 aaKnown RBP21.55■■□□□ 1.04
IGHV3-42-201ENST00000520410 MYH14Q7Z406 1995 aaKnown RBP21.55■■□□□ 1.04
IGHV3-42-201ENST00000520410 A0A0G2JLW4 131 aa21.54■■□□□ 1.04
IGHV3-42-201ENST00000520410 GIGYF1O75420 1035 aaPredicted RBP21.54■■□□□ 1.04
IGHV3-42-201ENST00000520410 CYP19A1P11511 503 aaPredicted RBP21.54■■□□□ 1.04
IGHV3-42-201ENST00000520410 FKBP8Q14318 412 aa21.54■■□□□ 1.04
IGHV3-42-201ENST00000520410 USPL1Q5W0Q7 1092 aa21.54■■□□□ 1.04
IGHV3-42-201ENST00000520410 RTF1Q92541 710 aaKnown RBP21.54■■□□□ 1.04
IGHV3-42-201ENST00000520410 RSPH6AQ9H0K4 717 aa21.54■■□□□ 1.04
IGHV3-42-201ENST00000520410 ZBTB1Q9Y2K1 713 aa21.54■■□□□ 1.04
IGHV3-42-201ENST00000520410 PXDNLA1KZ92 1463 aa21.53■■□□□ 1.04
IGHV3-42-201ENST00000520410 COL15A1P39059 1388 aa21.53■■□□□ 1.04
IGHV3-42-201ENST00000520410 NEFMP07197 916 aa21.53■■□□□ 1.04
IGHV3-42-201ENST00000520410 ZNF526Q8TF50 670 aaPredicted RBP21.53■■□□□ 1.04
IGHV3-42-201ENST00000520410 PHACTR3Q96KR7 559 aa21.53■■□□□ 1.04
IGHV3-42-201ENST00000520410 C10orf71Q711Q0 1435 aa21.53■■□□□ 1.04
IGHV3-42-201ENST00000520410 SOS1Q07889 1333 aaPredicted RBP21.53■■□□□ 1.04
IGHV3-42-201ENST00000520410 STARD3NLO95772 234 aa21.52■■□□□ 1.04
IGHV3-42-201ENST00000520410 TGFB2P61812 414 aa21.52■■□□□ 1.04
IGHV3-42-201ENST00000520410 NPM2Q86SE8 214 aaKnown RBP21.52■■□□□ 1.04
IGHV3-42-201ENST00000520410 IL17REQ8NFR9 667 aa21.52■■□□□ 1.04
IGHV3-42-201ENST00000520410 ADAMTS7Q9UKP4 1686 aa21.52■■□□□ 1.04
IGHV3-42-201ENST00000520410 N4BP2Q86UW6 1770 aaPredicted RBP21.51■■□□□ 1.03
IGHV3-42-201ENST00000520410 ATP10DQ9P241 1426 aa21.5■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms