RNA–Protein interactions for RNA: ENST00000520119.1

IGHV1-17-201, Transcript of immunoglobulin heavy variable 1-17 (pseudogene), humanhuman

BASIC

Gene IGHV1-17, Length 334 nt, Biotype IG V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV1-17-201ENST00000520119 PKD1L3Q7Z443 1732 aa15.18■□□□□ 0.02
IGHV1-17-201ENST00000520119 TUBGCP6Q96RT7 1819 aa15.18■□□□□ 0.02
IGHV1-17-201ENST00000520119 NKX1-1Q15270 411 aaPredicted RBP15.18■□□□□ 0.02
IGHV1-17-201ENST00000520119 MPRIPQ6WCQ1 1025 aa15.18■□□□□ 0.02
IGHV1-17-201ENST00000520119 EYA1Q99502 592 aa15.18■□□□□ 0.02
IGHV1-17-201ENST00000520119 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP15.18■□□□□ 0.02
IGHV1-17-201ENST00000520119 ZBTB47Q9UFB7 747 aaPredicted RBP15.18■□□□□ 0.02
IGHV1-17-201ENST00000520119 PALLDQ8WX93 1383 aa15.17■□□□□ 0.02
IGHV1-17-201ENST00000520119 SMARCC1Q92922 1105 aaPredicted RBP15.17■□□□□ 0.02
IGHV1-17-201ENST00000520119 COL24A1Q17RW2 1714 aa15.17■□□□□ 0.02
IGHV1-17-201ENST00000520119 PANK3Q9H999 370 aa15.16■□□□□ 0.02
IGHV1-17-201ENST00000520119 ITGB4P16144 1822 aa15.15■□□□□ 0.02
IGHV1-17-201ENST00000520119 TNNT2P45379 298 aaPredicted RBP15.15■□□□□ 0.02
IGHV1-17-201ENST00000520119 COL23A1Q86Y22 540 aaPredicted RBP15.15■□□□□ 0.02
IGHV1-17-201ENST00000520119 FLAD1Q8NFF5 587 aa15.15■□□□□ 0.02
IGHV1-17-201ENST00000520119 CREBZFQ9NS37 354 aa15.15■□□□□ 0.02
IGHV1-17-201ENST00000520119 GOLGB1Q14789 3259 aaKnown RBP15.14■□□□□ 0.01
IGHV1-17-201ENST00000520119 PLEKHG2Q9H7P9 1386 aa15.14■□□□□ 0.01
IGHV1-17-201ENST00000520119 C5P01031 1676 aa15.14■□□□□ 0.01
IGHV1-17-201ENST00000520119 EIF4A2Q14240 407 aaKnown RBP15.14■□□□□ 0.01
IGHV1-17-201ENST00000520119 IFNL2Q8IZJ0 200 aa15.14■□□□□ 0.01
IGHV1-17-201ENST00000520119 PIGBQ92521 554 aa15.14■□□□□ 0.01
IGHV1-17-201ENST00000520119 TOGARAM1Q9Y4F4 1720 aa15.14■□□□□ 0.01
IGHV1-17-201ENST00000520119 CHD4Q14839 1912 aa15.13■□□□□ 0.01
IGHV1-17-201ENST00000520119 TAF1LQ8IZX4 1826 aa15.13■□□□□ 0.01
IGHV1-17-201ENST00000520119 PHKG2P15735 406 aa15.11■□□□□ 0.01
IGHV1-17-201ENST00000520119 GPR162Q16538 588 aa15.11■□□□□ 0.01
IGHV1-17-201ENST00000520119 TMOD3Q9NYL9 352 aa15.11■□□□□ 0.01
IGHV1-17-201ENST00000520119 IGSF1Q8N6C5 1336 aa15.11■□□□□ 0.01
IGHV1-17-201ENST00000520119 MORC1Q86VD1 984 aa15.1■□□□□ 0.01
IGHV1-17-201ENST00000520119 AK7Q96M32 723 aa15.1■□□□□ 0.01
IGHV1-17-201ENST00000520119 LOC102724428A0A0B4J2F2 783 aa15.09■□□□□ 0.01
IGHV1-17-201ENST00000520119 SIK1P57059 783 aa15.09■□□□□ 0.01
IGHV1-17-201ENST00000520119 KNSTRNQ9Y448 316 aa15.09■□□□□ 0.01
IGHV1-17-201ENST00000520119 C4BP0C0L5 1744 aa15.09■□□□□ 0.01
IGHV1-17-201ENST00000520119 HSP90AB1P08238 724 aaKnown RBP15.08■□□□□ 0
IGHV1-17-201ENST00000520119 MSL1Q68DK7 614 aa15.08■□□□□ 0
IGHV1-17-201ENST00000520119 ZNF784Q8NCA9 323 aaPredicted RBP15.08■□□□□ 0
IGHV1-17-201ENST00000520119 PLEKHO1Q53GL0 409 aaPredicted RBP15.07■□□□□ 0
IGHV1-17-201ENST00000520119 NLGN2Q8NFZ4 835 aa15.07■□□□□ 0
IGHV1-17-201ENST00000520119 ASAP1Q9ULH1 1129 aa15.07■□□□□ 0
IGHV1-17-201ENST00000520119 ERVV-2B6SEH9 535 aa15.06■□□□□ 0
IGHV1-17-201ENST00000520119 SSFA2P28290 1259 aa15.06■□□□□ 0
IGHV1-17-201ENST00000520119 AMOTQ4VCS5 1084 aa15.06■□□□□ 0
IGHV1-17-201ENST00000520119 PELP1Q8IZL8 1130 aaKnown RBP15.06■□□□□ 0
IGHV1-17-201ENST00000520119 DCAF5Q96JK2 942 aa15.06■□□□□ 0
IGHV1-17-201ENST00000520119 UBR3Q6ZT12 1888 aa15.06■□□□□ 0
IGHV1-17-201ENST00000520119 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP15.05■□□□□ -0
IGHV1-17-201ENST00000520119 ATP6V1AP38606 617 aa15.05■□□□□ -0
IGHV1-17-201ENST00000520119 LINC00116Q8NCU8 138 aa15.05■□□□□ -0
IGHV1-17-201ENST00000520119 ATG3Q9NT62 314 aa15.05■□□□□ -0
IGHV1-17-201ENST00000520119 CD2APQ9Y5K6 639 aa15.05■□□□□ -0
IGHV1-17-201ENST00000520119 GRIN3BO60391 1043 aa15.04■□□□□ -0
IGHV1-17-201ENST00000520119 PHF14O94880 888 aa15.04■□□□□ -0
IGHV1-17-201ENST00000520119 AMIGO3Q86WK7 504 aa15.04■□□□□ -0
IGHV1-17-201ENST00000520119 MNX1P50219 401 aaPredicted RBP15.03■□□□□ -0
IGHV1-17-201ENST00000520119 ITPK1Q13572 414 aa15.03■□□□□ -0
IGHV1-17-201ENST00000520119 ZNF530Q6P9A1 599 aaPredicted RBP15.03■□□□□ -0
IGHV1-17-201ENST00000520119 GNPATO15228 680 aa15.02■□□□□ -0
IGHV1-17-201ENST00000520119 KIF7Q2M1P5 1343 aa15.01□□□□□ -0.01
IGHV1-17-201ENST00000520119 CABP4P57796 275 aa15.01□□□□□ -0.01
IGHV1-17-201ENST00000520119 C1orf141Q5JVX7 400 aa15.01□□□□□ -0.01
IGHV1-17-201ENST00000520119 SULT6B1Q6IMI4 303 aa15.01□□□□□ -0.01
IGHV1-17-201ENST00000520119 AEBP1Q8IUX7 1158 aa15.01□□□□□ -0.01
IGHV1-17-201ENST00000520119 KDRP35968 1356 aa15□□□□□ -0.01
IGHV1-17-201ENST00000520119 YBX3P16989 372 aaKnown RBP eCLIP15□□□□□ -0.01
IGHV1-17-201ENST00000520119 IL13P35225 146 aa15□□□□□ -0.01
IGHV1-17-201ENST00000520119 MTHFSP49914 203 aa15□□□□□ -0.01
IGHV1-17-201ENST00000520119 CHADLQ6NUI6 762 aa15□□□□□ -0.01
IGHV1-17-201ENST00000520119 SMIM5Q71RC9 77 aa15□□□□□ -0.01
IGHV1-17-201ENST00000520119 KDM6AO15550 1401 aaPredicted RBP15□□□□□ -0.01
IGHV1-17-201ENST00000520119 ZNF831Q5JPB2 1677 aa15□□□□□ -0.01
IGHV1-17-201ENST00000520119 RC3H1Q5TC82 1133 aaKnown RBP14.99□□□□□ -0.01
IGHV1-17-201ENST00000520119 TRAPPC3LQ5T215 181 aa14.98□□□□□ -0.01
IGHV1-17-201ENST00000520119 SLC4A9Q96Q91 983 aa14.98□□□□□ -0.01
IGHV1-17-201ENST00000520119 CIZ1Q9ULV3 898 aaPredicted RBP14.98□□□□□ -0.01
IGHV1-17-201ENST00000520119 RTCBQ9Y3I0 505 aaKnown RBP14.98□□□□□ -0.01
IGHV1-17-201ENST00000520119 PER1O15534 1290 aaPredicted RBP14.97□□□□□ -0.01
IGHV1-17-201ENST00000520119 CNTNAP4Q9C0A0 1308 aa14.96□□□□□ -0.01
IGHV1-17-201ENST00000520119 NUBP1P53384 320 aa14.96□□□□□ -0.01
IGHV1-17-201ENST00000520119 CHRDL2Q6WN34 429 aa14.96□□□□□ -0.01
IGHV1-17-201ENST00000520119 NFATC2IPQ8NCF5 419 aa14.96□□□□□ -0.01
IGHV1-17-201ENST00000520119 RPS6KA4O75676 772 aa14.95□□□□□ -0.02
IGHV1-17-201ENST00000520119 ECM2O94769 699 aaPredicted RBP14.95□□□□□ -0.02
IGHV1-17-201ENST00000520119 AKAP4Q5JQC9 854 aa14.95□□□□□ -0.02
IGHV1-17-201ENST00000520119 NLGN1Q8N2Q7 840 aa14.95□□□□□ -0.02
IGHV1-17-201ENST00000520119 COL5A3P25940 1745 aaPredicted RBP14.95□□□□□ -0.02
IGHV1-17-201ENST00000520119 PTCD1O75127 700 aaKnown RBP14.94□□□□□ -0.02
IGHV1-17-201ENST00000520119 MMP10P09238 476 aa14.94□□□□□ -0.02
IGHV1-17-201ENST00000520119 ARHGEF1Q92888 912 aaKnown RBP14.94□□□□□ -0.02
IGHV1-17-201ENST00000520119 RFC4P35249 363 aa14.93□□□□□ -0.02
IGHV1-17-201ENST00000520119 CC2D1BQ5T0F9 858 aaKnown RBP14.93□□□□□ -0.02
IGHV1-17-201ENST00000520119 SCN11AQ9UI33 1791 aa14.93□□□□□ -0.02
IGHV1-17-201ENST00000520119 MYH14Q7Z406 1995 aaKnown RBP14.93□□□□□ -0.02
IGHV1-17-201ENST00000520119 DIAPH1O60610 1272 aaKnown RBP14.92□□□□□ -0.02
IGHV1-17-201ENST00000520119 FXR2P51116 673 aaKnown RBP eCLIP14.92□□□□□ -0.02
IGHV1-17-201ENST00000520119 C1QTNF8P60827 252 aa14.92□□□□□ -0.02
IGHV1-17-201ENST00000520119 NPC1L1Q9UHC9 1359 aa14.92□□□□□ -0.02
IGHV1-17-201ENST00000520119 GIGYF1O75420 1035 aaPredicted RBP14.91□□□□□ -0.02
IGHV1-17-201ENST00000520119 HMOX1P09601 288 aa14.91□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 355.8 ms