RNA–Protein interactions for RNA: ENST00000519686.6

VNN3-212, Transcript of vanin 3, humanhuman

TSL 1 (best) BASIC

Gene VNN3, Length 1,377 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VNN3-212ENST00000519686 SPG7Q9UQ90 795 aa12.44□□□□□ -0.42
VNN3-212ENST00000519686 SGIP1Q9BQI5 828 aa12.43□□□□□ -0.42
VNN3-212ENST00000519686 ZBTB47Q9UFB7 747 aaPredicted RBP12.43□□□□□ -0.42
VNN3-212ENST00000519686 PKD1L3Q7Z443 1732 aa12.43□□□□□ -0.42
VNN3-212ENST00000519686 PNPLA7Q6ZV29 1317 aa12.43□□□□□ -0.42
VNN3-212ENST00000519686 PANK3Q9H999 370 aa12.43□□□□□ -0.42
VNN3-212ENST00000519686 POLKQ9UBT6 870 aa12.43□□□□□ -0.42
VNN3-212ENST00000519686 TUBGCP6Q96RT7 1819 aa12.43□□□□□ -0.42
VNN3-212ENST00000519686 CYP27B1O15528 508 aa12.42□□□□□ -0.42
VNN3-212ENST00000519686 EYA1Q99502 592 aa12.42□□□□□ -0.42
VNN3-212ENST00000519686 PALLDQ8WX93 1383 aa12.42□□□□□ -0.42
VNN3-212ENST00000519686 C5P01031 1676 aa12.42□□□□□ -0.42
VNN3-212ENST00000519686 SMARCC1Q92922 1105 aaPredicted RBP12.41□□□□□ -0.42
VNN3-212ENST00000519686 ITGB4P16144 1822 aa12.41□□□□□ -0.42
VNN3-212ENST00000519686 NCAPD2Q15021 1401 aa12.4□□□□□ -0.42
VNN3-212ENST00000519686 TOGARAM1Q9Y4F4 1720 aa12.4□□□□□ -0.42
VNN3-212ENST00000519686 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.4□□□□□ -0.42
VNN3-212ENST00000519686 MAP3K5Q99683 1374 aa12.39□□□□□ -0.43
VNN3-212ENST00000519686 EIF4A2Q14240 407 aaKnown RBP12.39□□□□□ -0.43
VNN3-212ENST00000519686 MORC1Q86VD1 984 aa12.39□□□□□ -0.43
VNN3-212ENST00000519686 TMOD3Q9NYL9 352 aa12.39□□□□□ -0.43
VNN3-212ENST00000519686 KNSTRNQ9Y448 316 aa12.39□□□□□ -0.43
VNN3-212ENST00000519686 NKX1-1Q15270 411 aaPredicted RBP12.38□□□□□ -0.43
VNN3-212ENST00000519686 GPR162Q16538 588 aa12.38□□□□□ -0.43
VNN3-212ENST00000519686 IFNL2Q8IZJ0 200 aa12.38□□□□□ -0.43
VNN3-212ENST00000519686 FLAD1Q8NFF5 587 aa12.38□□□□□ -0.43
VNN3-212ENST00000519686 PIGBQ92521 554 aa12.38□□□□□ -0.43
VNN3-212ENST00000519686 AK7Q96M32 723 aa12.38□□□□□ -0.43
VNN3-212ENST00000519686 TAF1LQ8IZX4 1826 aa12.37□□□□□ -0.43
VNN3-212ENST00000519686 COL23A1Q86Y22 540 aaPredicted RBP12.37□□□□□ -0.43
VNN3-212ENST00000519686 PELP1Q8IZL8 1130 aaKnown RBP12.37□□□□□ -0.43
VNN3-212ENST00000519686 COL24A1Q17RW2 1714 aa12.36□□□□□ -0.43
VNN3-212ENST00000519686 PHKG2P15735 406 aa12.36□□□□□ -0.43
VNN3-212ENST00000519686 MSL1Q68DK7 614 aa12.36□□□□□ -0.43
VNN3-212ENST00000519686 C4BP0C0L5 1744 aa12.36□□□□□ -0.43
VNN3-212ENST00000519686 PLEKHG2Q9H7P9 1386 aa12.36□□□□□ -0.43
VNN3-212ENST00000519686 IGSF1Q8N6C5 1336 aa12.35□□□□□ -0.43
VNN3-212ENST00000519686 PHF14O94880 888 aa12.34□□□□□ -0.43
VNN3-212ENST00000519686 HSP90AB1P08238 724 aaKnown RBP12.34□□□□□ -0.43
VNN3-212ENST00000519686 PLEKHO1Q53GL0 409 aaPredicted RBP12.34□□□□□ -0.43
VNN3-212ENST00000519686 LOC102724428A0A0B4J2F2 783 aa12.33□□□□□ -0.44
VNN3-212ENST00000519686 SIK1P57059 783 aa12.33□□□□□ -0.44
VNN3-212ENST00000519686 ASAP1Q9ULH1 1129 aa12.33□□□□□ -0.44
VNN3-212ENST00000519686 CHD4Q14839 1912 aa12.33□□□□□ -0.44
VNN3-212ENST00000519686 ATP6V1AP38606 617 aa12.32□□□□□ -0.44
VNN3-212ENST00000519686 AMOTQ4VCS5 1084 aa12.32□□□□□ -0.44
VNN3-212ENST00000519686 C1orf141Q5JVX7 400 aa12.32□□□□□ -0.44
VNN3-212ENST00000519686 ZNF530Q6P9A1 599 aaPredicted RBP12.32□□□□□ -0.44
VNN3-212ENST00000519686 NLGN2Q8NFZ4 835 aa12.32□□□□□ -0.44
VNN3-212ENST00000519686 SPOCK2Q92563 424 aa12.32□□□□□ -0.44
VNN3-212ENST00000519686 DCAF5Q96JK2 942 aa12.32□□□□□ -0.44
VNN3-212ENST00000519686 ERVV-2B6SEH9 535 aa12.31□□□□□ -0.44
VNN3-212ENST00000519686 NUBP1P53384 320 aa12.31□□□□□ -0.44
VNN3-212ENST00000519686 KIF7Q2M1P5 1343 aa12.31□□□□□ -0.44
VNN3-212ENST00000519686 UBR3Q6ZT12 1888 aa12.31□□□□□ -0.44
VNN3-212ENST00000519686 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.3□□□□□ -0.44
VNN3-212ENST00000519686 HAX1O00165 279 aa12.3□□□□□ -0.44
VNN3-212ENST00000519686 GNPATO15228 680 aa12.3□□□□□ -0.44
VNN3-212ENST00000519686 SSFA2P28290 1259 aa12.3□□□□□ -0.44
VNN3-212ENST00000519686 CABP4P57796 275 aa12.3□□□□□ -0.44
VNN3-212ENST00000519686 LINC00116Q8NCU8 138 aa12.3□□□□□ -0.44
VNN3-212ENST00000519686 ATG3Q9NT62 314 aa12.3□□□□□ -0.44
VNN3-212ENST00000519686 MTHFSP49914 203 aa12.3□□□□□ -0.44
VNN3-212ENST00000519686 SULT6B1Q6IMI4 303 aa12.3□□□□□ -0.44
VNN3-212ENST00000519686 ZNF784Q8NCA9 323 aaPredicted RBP12.3□□□□□ -0.44
VNN3-212ENST00000519686 C19orf67A6NJJ6 358 aa12.29□□□□□ -0.44
VNN3-212ENST00000519686 ITPK1Q13572 414 aa12.29□□□□□ -0.44
VNN3-212ENST00000519686 AEBP1Q8IUX7 1158 aa12.29□□□□□ -0.44
VNN3-212ENST00000519686 RASEFQ8IZ41 740 aa12.29□□□□□ -0.44
VNN3-212ENST00000519686 CD2APQ9Y5K6 639 aa12.29□□□□□ -0.44
VNN3-212ENST00000519686 GRIN3BO60391 1043 aa12.28□□□□□ -0.44
VNN3-212ENST00000519686 AMER1Q5JTC6 1135 aaPredicted RBP12.28□□□□□ -0.44
VNN3-212ENST00000519686 SMIM5Q71RC9 77 aa12.28□□□□□ -0.44
VNN3-212ENST00000519686 AMIGO3Q86WK7 504 aa12.28□□□□□ -0.44
VNN3-212ENST00000519686 UTRNP46939 3433 aa12.27□□□□□ -0.44
VNN3-212ENST00000519686 IL13P35225 146 aa12.27□□□□□ -0.45
VNN3-212ENST00000519686 CC2D1BQ5T0F9 858 aaKnown RBP12.27□□□□□ -0.45
VNN3-212ENST00000519686 TSPYL2Q9H2G4 693 aaPredicted RBP12.27□□□□□ -0.45
VNN3-212ENST00000519686 RTCBQ9Y3I0 505 aaKnown RBP12.27□□□□□ -0.45
VNN3-212ENST00000519686 KDM6AO15550 1401 aaPredicted RBP12.26□□□□□ -0.45
VNN3-212ENST00000519686 ZNF831Q5JPB2 1677 aa12.26□□□□□ -0.45
VNN3-212ENST00000519686 CD44P16070 742 aaKnown RBP12.26□□□□□ -0.45
VNN3-212ENST00000519686 TRAPPC3LQ5T215 181 aa12.26□□□□□ -0.45
VNN3-212ENST00000519686 KDRP35968 1356 aa12.25□□□□□ -0.45
VNN3-212ENST00000519686 PTCD1O75127 700 aaKnown RBP12.25□□□□□ -0.45
VNN3-212ENST00000519686 YBX3P16989 372 aaKnown RBP eCLIP12.25□□□□□ -0.45
VNN3-212ENST00000519686 EVX2Q03828 476 aa12.25□□□□□ -0.45
VNN3-212ENST00000519686 CNGB1Q14028 1251 aaPredicted RBP12.25□□□□□ -0.45
VNN3-212ENST00000519686 NFATC2IPQ8NCF5 419 aa12.25□□□□□ -0.45
VNN3-212ENST00000519686 COL5A3P25940 1745 aaPredicted RBP12.23□□□□□ -0.45
VNN3-212ENST00000519686 DIAPH1O60610 1272 aaKnown RBP12.23□□□□□ -0.45
VNN3-212ENST00000519686 HMOX1P09601 288 aa12.23□□□□□ -0.45
VNN3-212ENST00000519686 RFC4P35249 363 aa12.23□□□□□ -0.45
VNN3-212ENST00000519686 AKAP4Q5JQC9 854 aa12.23□□□□□ -0.45
VNN3-212ENST00000519686 RC3H1Q5TC82 1133 aaKnown RBP12.23□□□□□ -0.45
VNN3-212ENST00000519686 SCN11AQ9UI33 1791 aa12.23□□□□□ -0.45
VNN3-212ENST00000519686 CNTNAP4Q9C0A0 1308 aa12.22□□□□□ -0.45
VNN3-212ENST00000519686 PER1O15534 1290 aaPredicted RBP12.22□□□□□ -0.45
VNN3-212ENST00000519686 MMP10P09238 476 aa12.22□□□□□ -0.45
VNN3-212ENST00000519686 NLGN1Q8N2Q7 840 aa12.22□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms