RNA–Protein interactions for RNA: ENST00000519599.1

IGKV3D-25-201, Transcript of immunoglobulin kappa variable 3D-25 (pseudogene), humanhuman

BASIC

Gene IGKV3D-25, Length 235 nt, Biotype IG V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGKV3D-25-201ENST00000519599 SPG7Q9UQ90 795 aa8.45□□□□□ -1.06
IGKV3D-25-201ENST00000519599 AFDNP55196 1824 aaKnown RBP8.45□□□□□ -1.06
IGKV3D-25-201ENST00000519599 KCPQ6ZWJ8 1503 aa8.44□□□□□ -1.06
IGKV3D-25-201ENST00000519599 MORC1Q86VD1 984 aa8.44□□□□□ -1.06
IGKV3D-25-201ENST00000519599 NLGN2Q8NFZ4 835 aa8.44□□□□□ -1.06
IGKV3D-25-201ENST00000519599 GOLGB1Q14789 3259 aaKnown RBP8.43□□□□□ -1.06
IGKV3D-25-201ENST00000519599 LOC102724428A0A0B4J2F2 783 aa8.43□□□□□ -1.06
IGKV3D-25-201ENST00000519599 MTHFSP49914 203 aa8.43□□□□□ -1.06
IGKV3D-25-201ENST00000519599 SIK1P57059 783 aa8.43□□□□□ -1.06
IGKV3D-25-201ENST00000519599 TFCP2L1Q9NZI6 479 aa8.43□□□□□ -1.06
IGKV3D-25-201ENST00000519599 KNSTRNQ9Y448 316 aa8.43□□□□□ -1.06
IGKV3D-25-201ENST00000519599 MSL1Q68DK7 614 aa8.42□□□□□ -1.06
IGKV3D-25-201ENST00000519599 SULT6B1Q6IMI4 303 aa8.42□□□□□ -1.06
IGKV3D-25-201ENST00000519599 SMARCC1Q92922 1105 aaPredicted RBP8.42□□□□□ -1.06
IGKV3D-25-201ENST00000519599 NRXN2Q9P2S2 1712 aa8.42□□□□□ -1.06
IGKV3D-25-201ENST00000519599 ARFGEF1Q9Y6D6 1849 aa8.42□□□□□ -1.06
IGKV3D-25-201ENST00000519599 ERVV-2B6SEH9 535 aa8.41□□□□□ -1.06
IGKV3D-25-201ENST00000519599 TMOD3Q9NYL9 352 aa8.41□□□□□ -1.06
IGKV3D-25-201ENST00000519599 DLEC1Q9Y238 1755 aa8.4□□□□□ -1.06
IGKV3D-25-201ENST00000519599 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP8.4□□□□□ -1.06
IGKV3D-25-201ENST00000519599 YBX3P16989 372 aaKnown RBP eCLIP8.4□□□□□ -1.06
IGKV3D-25-201ENST00000519599 YY1P25490 414 aa8.4□□□□□ -1.06
IGKV3D-25-201ENST00000519599 PLEKHO1Q53GL0 409 aaPredicted RBP8.4□□□□□ -1.06
IGKV3D-25-201ENST00000519599 CC2D1BQ5T0F9 858 aaKnown RBP8.4□□□□□ -1.06
IGKV3D-25-201ENST00000519599 ZNF530Q6P9A1 599 aaPredicted RBP8.4□□□□□ -1.06
IGKV3D-25-201ENST00000519599 DCAF5Q96JK2 942 aa8.4□□□□□ -1.06
IGKV3D-25-201ENST00000519599 SBF1O95248 1867 aa8.39□□□□□ -1.07
IGKV3D-25-201ENST00000519599 ANKRD31Q8N7Z5 1873 aa8.39□□□□□ -1.07
IGKV3D-25-201ENST00000519599 CNTNAP4Q9C0A0 1308 aa8.39□□□□□ -1.07
IGKV3D-25-201ENST00000519599 HMOX1P09601 288 aa8.39□□□□□ -1.07
IGKV3D-25-201ENST00000519599 SSFA2P28290 1259 aa8.39□□□□□ -1.07
IGKV3D-25-201ENST00000519599 ATP6V1AP38606 617 aa8.39□□□□□ -1.07
IGKV3D-25-201ENST00000519599 MTHFSDQ2M296 383 aaKnown RBP8.39□□□□□ -1.07
IGKV3D-25-201ENST00000519599 AMOTQ4VCS5 1084 aa8.39□□□□□ -1.07
IGKV3D-25-201ENST00000519599 LGR6Q9HBX8 967 aa8.39□□□□□ -1.07
IGKV3D-25-201ENST00000519599 BCORQ6W2J9 1755 aa8.39□□□□□ -1.07
IGKV3D-25-201ENST00000519599 KDM3BQ7LBC6 1761 aa8.38□□□□□ -1.07
IGKV3D-25-201ENST00000519599 SCN7AQ01118 1682 aa8.38□□□□□ -1.07
IGKV3D-25-201ENST00000519599 NFATC2IPQ8NCF5 419 aa8.38□□□□□ -1.07
IGKV3D-25-201ENST00000519599 PXDNLA1KZ92 1463 aa8.38□□□□□ -1.07
IGKV3D-25-201ENST00000519599 CCDC88AQ3V6T2 1871 aa8.37□□□□□ -1.07
IGKV3D-25-201ENST00000519599 GNPATO15228 680 aa8.37□□□□□ -1.07
IGKV3D-25-201ENST00000519599 PHF14O94880 888 aa8.37□□□□□ -1.07
IGKV3D-25-201ENST00000519599 HSP90AB1P08238 724 aaKnown RBP8.37□□□□□ -1.07
IGKV3D-25-201ENST00000519599 POLD1P28340 1107 aa8.37□□□□□ -1.07
IGKV3D-25-201ENST00000519599 AKAP4Q5JQC9 854 aa8.37□□□□□ -1.07
IGKV3D-25-201ENST00000519599 RC3H1Q5TC82 1133 aaKnown RBP8.37□□□□□ -1.07
IGKV3D-25-201ENST00000519599 FLAD1Q8NFF5 587 aa8.37□□□□□ -1.07
IGKV3D-25-201ENST00000519599 AK7Q96M32 723 aa8.37□□□□□ -1.07
IGKV3D-25-201ENST00000519599 C10orf71Q711Q0 1435 aa8.37□□□□□ -1.07
IGKV3D-25-201ENST00000519599 LAMB4A4D0S4 1761 aa8.36□□□□□ -1.07
IGKV3D-25-201ENST00000519599 RNMTO43148 476 aaKnown RBP8.36□□□□□ -1.07
IGKV3D-25-201ENST00000519599 DIAPH1O60610 1272 aaKnown RBP8.36□□□□□ -1.07
IGKV3D-25-201ENST00000519599 INTS5Q6P9B9 1019 aaKnown RBP8.36□□□□□ -1.07
IGKV3D-25-201ENST00000519599 ZNF784Q8NCA9 323 aaPredicted RBP8.36□□□□□ -1.07
IGKV3D-25-201ENST00000519599 ARHGEF1Q92888 912 aaKnown RBP8.36□□□□□ -1.07
IGKV3D-25-201ENST00000519599 SLC52A2Q9HAB3 445 aa8.36□□□□□ -1.07
IGKV3D-25-201ENST00000519599 CD2APQ9Y5K6 639 aa8.36□□□□□ -1.07
IGKV3D-25-201ENST00000519599 COL11A2P13942 1736 aaPredicted RBP8.36□□□□□ -1.07
IGKV3D-25-201ENST00000519599 ADCY9O60503 1353 aa8.35□□□□□ -1.07
IGKV3D-25-201ENST00000519599 CEMIPQ8WUJ3 1361 aa8.35□□□□□ -1.07
IGKV3D-25-201ENST00000519599 CACNA1SQ13698 1873 aa8.35□□□□□ -1.07
IGKV3D-25-201ENST00000519599 MSH5O43196 834 aa8.35□□□□□ -1.07
IGKV3D-25-201ENST00000519599 RPS6KA4O75676 772 aa8.35□□□□□ -1.07
IGKV3D-25-201ENST00000519599 GYS1P13807 737 aa8.35□□□□□ -1.07
IGKV3D-25-201ENST00000519599 CABP4P57796 275 aa8.35□□□□□ -1.07
IGKV3D-25-201ENST00000519599 SLC39A6Q13433 755 aa8.35□□□□□ -1.07
IGKV3D-25-201ENST00000519599 IL17REQ8NFR9 667 aa8.35□□□□□ -1.07
IGKV3D-25-201ENST00000519599 PHACTR3Q96KR7 559 aa8.35□□□□□ -1.07
IGKV3D-25-201ENST00000519599 RBM42Q9BTD8 480 aaKnown RBP8.35□□□□□ -1.07
IGKV3D-25-201ENST00000519599 RSPH6AQ9H0K4 717 aa8.35□□□□□ -1.07
IGKV3D-25-201ENST00000519599 PTCD1O75127 700 aaKnown RBP8.34□□□□□ -1.07
IGKV3D-25-201ENST00000519599 PPP2R1AP30153 589 aa8.34□□□□□ -1.07
IGKV3D-25-201ENST00000519599 CRKLP46109 303 aaKnown RBP8.34□□□□□ -1.07
IGKV3D-25-201ENST00000519599 C1orf141Q5JVX7 400 aa8.34□□□□□ -1.07
IGKV3D-25-201ENST00000519599 DNAJC10Q8IXB1 793 aa8.34□□□□□ -1.07
IGKV3D-25-201ENST00000519599 KLHL34Q8N239 644 aa8.34□□□□□ -1.07
IGKV3D-25-201ENST00000519599 SOS1Q07889 1333 aaPredicted RBP8.33□□□□□ -1.08
IGKV3D-25-201ENST00000519599 USP42Q9H9J4 1324 aaKnown RBP8.33□□□□□ -1.08
IGKV3D-25-201ENST00000519599 ARFGEF2Q9Y6D5 1785 aa8.33□□□□□ -1.08
IGKV3D-25-201ENST00000519599 MMP10P09238 476 aa8.33□□□□□ -1.08
IGKV3D-25-201ENST00000519599 CYP19A1P11511 503 aaPredicted RBP8.33□□□□□ -1.08
IGKV3D-25-201ENST00000519599 ADRA2BP18089 450 aa8.33□□□□□ -1.08
IGKV3D-25-201ENST00000519599 DDR1Q08345 913 aa8.33□□□□□ -1.08
IGKV3D-25-201ENST00000519599 BCL2L12Q9HB09 334 aa8.33□□□□□ -1.08
IGKV3D-25-201ENST00000519599 SRP68Q9UHB9 627 aaKnown RBP8.33□□□□□ -1.08
IGKV3D-25-201ENST00000519599 RTCBQ9Y3I0 505 aaKnown RBP8.33□□□□□ -1.08
IGKV3D-25-201ENST00000519599 NUP98P52948 1817 aa8.32□□□□□ -1.08
IGKV3D-25-201ENST00000519599 KCNA3P22001 575 aa8.32□□□□□ -1.08
IGKV3D-25-201ENST00000519599 CNGB1Q14028 1251 aaPredicted RBP8.32□□□□□ -1.08
IGKV3D-25-201ENST00000519599 FKBP8Q14318 412 aa8.32□□□□□ -1.08
IGKV3D-25-201ENST00000519599 GPR162Q16538 588 aa8.32□□□□□ -1.08
IGKV3D-25-201ENST00000519599 TRAPPC3LQ5T215 181 aa8.32□□□□□ -1.08
IGKV3D-25-201ENST00000519599 DICER1Q9UPY3 1922 aaKnown RBP8.31□□□□□ -1.08
IGKV3D-25-201ENST00000519599 KCNQ3O43525 872 aa8.31□□□□□ -1.08
IGKV3D-25-201ENST00000519599 TM4SF1P30408 202 aa8.31□□□□□ -1.08
IGKV3D-25-201ENST00000519599 ZBTB1Q9Y2K1 713 aa8.31□□□□□ -1.08
IGKV3D-25-201ENST00000519599 FER1L6Q2WGJ9 1857 aa8.31□□□□□ -1.08
IGKV3D-25-201ENST00000519599 HMGB2P26583 209 aaKnown RBP8.3□□□□□ -1.08
IGKV3D-25-201ENST00000519599 PRKAR2BP31323 418 aa8.3□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 61.8 ms