RNA–Protein interactions for RNA: ENST00000519540.5

FAM49B-214, Transcript of family with sequence similarity 49 member B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FAM49B, Length 2,021 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM49B-214ENST00000519540 NECTIN2Q92692 538 aa23.28■■□□□ 1.32
FAM49B-214ENST00000519540 MEGF6O75095 1541 aa23.28■■□□□ 1.32
FAM49B-214ENST00000519540 PLEKHG2Q9H7P9 1386 aa23.28■■□□□ 1.32
FAM49B-214ENST00000519540 KCNQ3O43525 872 aa23.28■■□□□ 1.32
FAM49B-214ENST00000519540 PRDM11Q9NQV5 511 aa23.28■■□□□ 1.32
FAM49B-214ENST00000519540 SPG7Q9UQ90 795 aa23.28■■□□□ 1.32
FAM49B-214ENST00000519540 HOXB7P09629 217 aa23.27■■□□□ 1.32
FAM49B-214ENST00000519540 FLIIQ13045 1269 aa23.26■■□□□ 1.31
FAM49B-214ENST00000519540 HDGFL1Q5TGJ6 251 aa23.26■■□□□ 1.31
FAM49B-214ENST00000519540 SIRT2Q8IXJ6 389 aa23.26■■□□□ 1.31
FAM49B-214ENST00000519540 ANP32AP39687 249 aaKnown RBP23.26■■□□□ 1.31
FAM49B-214ENST00000519540 F6X3S4 739 aa23.25■■□□□ 1.31
FAM49B-214ENST00000519540 MSH5O43196 834 aa23.25■■□□□ 1.31
FAM49B-214ENST00000519540 SIPA1L3O60292 1781 aaPredicted RBP23.25■■□□□ 1.31
FAM49B-214ENST00000519540 ABCA3Q99758 1704 aa23.25■■□□□ 1.31
FAM49B-214ENST00000519540 PHKG2P15735 406 aa23.24■■□□□ 1.31
FAM49B-214ENST00000519540 CCT4P50991 539 aaKnown RBP23.24■■□□□ 1.31
FAM49B-214ENST00000519540 CHMP4AQ9BY43 222 aa23.23■■□□□ 1.31
FAM49B-214ENST00000519540 NUCB1Q02818 461 aa23.23■■□□□ 1.31
FAM49B-214ENST00000519540 FKBP5Q13451 457 aaPredicted RBP23.23■■□□□ 1.31
FAM49B-214ENST00000519540 SLC4A10Q6U841 1118 aa23.23■■□□□ 1.31
FAM49B-214ENST00000519540 GCC1Q96CN9 775 aa23.23■■□□□ 1.31
FAM49B-214ENST00000519540 WDR17Q8IZU2 1322 aa23.22■■□□□ 1.31
FAM49B-214ENST00000519540 IFNL2Q8IZJ0 200 aa23.22■■□□□ 1.31
FAM49B-214ENST00000519540 SCN11AQ9UI33 1791 aa23.21■■□□□ 1.31
FAM49B-214ENST00000519540 KDM6AO15550 1401 aaPredicted RBP23.21■■□□□ 1.31
FAM49B-214ENST00000519540 EIF2S2P20042 333 aaKnown RBP23.21■■□□□ 1.31
FAM49B-214ENST00000519540 MEIS3Q99687 375 aa23.21■■□□□ 1.31
FAM49B-214ENST00000519540 HEG1Q9ULI3 1381 aa23.21■■□□□ 1.31
FAM49B-214ENST00000519540 PKD1L3Q7Z443 1732 aa23.2■■□□□ 1.31
FAM49B-214ENST00000519540 NPM2Q86SE8 214 aaKnown RBP23.2■■□□□ 1.3
FAM49B-214ENST00000519540 COL5A2P05997 1499 aaPredicted RBP23.2■■□□□ 1.3
FAM49B-214ENST00000519540 RPAP2Q8IXW5 612 aaPredicted RBP23.19■■□□□ 1.3
FAM49B-214ENST00000519540 SLC52A2Q9HAB3 445 aa23.19■■□□□ 1.3
FAM49B-214ENST00000519540 CYP27B1O15528 508 aa23.18■■□□□ 1.3
FAM49B-214ENST00000519540 TOM1L2Q6ZVM7 507 aa23.18■■□□□ 1.3
FAM49B-214ENST00000519540 CHD1LQ86WJ1 897 aa23.18■■□□□ 1.3
FAM49B-214ENST00000519540 ANKRD44Q8N8A2 993 aa23.18■■□□□ 1.3
FAM49B-214ENST00000519540 PHAXQ9H814 394 aaKnown RBP23.18■■□□□ 1.3
FAM49B-214ENST00000519540 ATP10DQ9P241 1426 aa23.18■■□□□ 1.3
FAM49B-214ENST00000519540 GIGYF1O75420 1035 aaPredicted RBP23.18■■□□□ 1.3
FAM49B-214ENST00000519540 IPO9Q96P70 1041 aaKnown RBP23.18■■□□□ 1.3
FAM49B-214ENST00000519540 DCAF5Q96JK2 942 aa23.16■■□□□ 1.3
FAM49B-214ENST00000519540 CHPF2Q9P2E5 772 aa23.16■■□□□ 1.3
FAM49B-214ENST00000519540 CEP85Q6P2H3 762 aa23.16■■□□□ 1.3
FAM49B-214ENST00000519540 LNPKQ9C0E8 428 aa23.16■■□□□ 1.3
FAM49B-214ENST00000519540 ANKRD45Q5TZF3 282 aa23.15■■□□□ 1.3
FAM49B-214ENST00000519540 NFATC2IPQ8NCF5 419 aa23.15■■□□□ 1.3
FAM49B-214ENST00000519540 PXDNLA1KZ92 1463 aa23.15■■□□□ 1.3
FAM49B-214ENST00000519540 DCTPP1Q9H773 170 aa23.15■■□□□ 1.3
FAM49B-214ENST00000519540 HSP90AB1P08238 724 aaKnown RBP23.14■■□□□ 1.29
FAM49B-214ENST00000519540 CARD10Q9BWT7 1032 aa23.14■■□□□ 1.29
FAM49B-214ENST00000519540 LTBP4Q8N2S1 1624 aa23.13■■□□□ 1.29
FAM49B-214ENST00000519540 ROBO1Q9Y6N7 1651 aa23.13■■□□□ 1.29
FAM49B-214ENST00000519540 PARP4Q9UKK3 1724 aaKnown RBP23.13■■□□□ 1.29
FAM49B-214ENST00000519540 N4BP2Q86UW6 1770 aaPredicted RBP23.13■■□□□ 1.29
FAM49B-214ENST00000519540 ZNF790Q6PG37 636 aa23.13■■□□□ 1.29
FAM49B-214ENST00000519540 DBF4Q9UBU7 674 aaPredicted RBP23.13■■□□□ 1.29
FAM49B-214ENST00000519540 MRC1P22897 1456 aa23.12■■□□□ 1.29
FAM49B-214ENST00000519540 EVA1CP58658 441 aa23.11■■□□□ 1.29
FAM49B-214ENST00000519540 SLC39A6Q13433 755 aa23.11■■□□□ 1.29
FAM49B-214ENST00000519540 PRAMEF22A3QJZ6 481 aa23.11■■□□□ 1.29
FAM49B-214ENST00000519540 LARP1Q6PKG0 1096 aaKnown RBP23.11■■□□□ 1.29
FAM49B-214ENST00000519540 ZCRB1Q8TBF4 217 aaKnown RBP23.11■■□□□ 1.29
FAM49B-214ENST00000519540 STRN4Q9NRL3 753 aa23.11■■□□□ 1.29
FAM49B-214ENST00000519540 GNAI3P08754 354 aa23.1■■□□□ 1.29
FAM49B-214ENST00000519540 ANXA1P04083 346 aa23.09■■□□□ 1.29
FAM49B-214ENST00000519540 GNAI2P04899 355 aa23.09■■□□□ 1.29
FAM49B-214ENST00000519540 AHDC1Q5TGY3 1603 aaPredicted RBP23.09■■□□□ 1.29
FAM49B-214ENST00000519540 IL2RBP14784 551 aa23.09■■□□□ 1.29
FAM49B-214ENST00000519540 PCDH11XQ9BZA7 1347 aa23.08■■□□□ 1.29
FAM49B-214ENST00000519540 PCDH11YQ9BZA8 1340 aa23.08■■□□□ 1.29
FAM49B-214ENST00000519540 SEC24BO95487 1268 aa23.08■■□□□ 1.29
FAM49B-214ENST00000519540 PI4KAP2A4QPH2 592 aa23.07■■□□□ 1.28
FAM49B-214ENST00000519540 PI4KAP1Q8N8J0 262 aa23.07■■□□□ 1.28
FAM49B-214ENST00000519540 USP44Q9H0E7 712 aa23.07■■□□□ 1.28
FAM49B-214ENST00000519540 CABP4P57796 275 aa23.06■■□□□ 1.28
FAM49B-214ENST00000519540 DNAAF4Q8WXU2 420 aa23.06■■□□□ 1.28
FAM49B-214ENST00000519540 HMMRO75330 724 aa23.06■■□□□ 1.28
FAM49B-214ENST00000519540 PROSER3Q2NL68 480 aa23.06■■□□□ 1.28
FAM49B-214ENST00000519540 SRCIN1Q9C0H9 1055 aa23.06■■□□□ 1.28
FAM49B-214ENST00000519540 ZNF496Q96IT1 587 aaPredicted RBP23.05■■□□□ 1.28
FAM49B-214ENST00000519540 HYPKQ9NX55 129 aa23.05■■□□□ 1.28
FAM49B-214ENST00000519540 ADCY9O60503 1353 aa23.05■■□□□ 1.28
FAM49B-214ENST00000519540 DDX21Q9NR30 783 aaKnown RBP eCLIP23.04■■□□□ 1.28
FAM49B-214ENST00000519540 NKX1-1Q15270 411 aaPredicted RBP23.04■■□□□ 1.28
FAM49B-214ENST00000519540 BEND3Q5T5X7 828 aa23.04■■□□□ 1.28
FAM49B-214ENST00000519540 TTC5Q8N0Z6 440 aa23.04■■□□□ 1.28
FAM49B-214ENST00000519540 BTG4Q9NY30 223 aa23.04■■□□□ 1.28
FAM49B-214ENST00000519540 ZBTB47Q9UFB7 747 aaPredicted RBP23.04■■□□□ 1.28
FAM49B-214ENST00000519540 NOP58Q9Y2X3 529 aaKnown RBP23.04■■□□□ 1.28
FAM49B-214ENST00000519540 COL22A1Q8NFW1 1626 aaPredicted RBP23.04■■□□□ 1.28
FAM49B-214ENST00000519540 C5P01031 1676 aa23.03■■□□□ 1.28
FAM49B-214ENST00000519540 PDIA6Q15084 440 aa23.03■■□□□ 1.28
FAM49B-214ENST00000519540 ATP8B2P98198 1209 aa23.02■■□□□ 1.28
FAM49B-214ENST00000519540 UBTFL1P0CB47 393 aaPredicted RBP23.01■■□□□ 1.27
FAM49B-214ENST00000519540 KSR2Q6VAB6 950 aa23.01■■□□□ 1.27
FAM49B-214ENST00000519540 COL14A1Q05707 1796 aaKnown RBP23.01■■□□□ 1.27
FAM49B-214ENST00000519540 SHANK3Q9BYB0 1731 aa23.01■■□□□ 1.27
FAM49B-214ENST00000519540 ERVV-2B6SEH9 535 aa23.01■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms