RNA–Protein interactions for RNA: ENST00000519485.1

CSMD3-209, Transcript of CUB and Sushi multiple domains 3, humanhuman

TSL 3

Gene CSMD3, Length 452 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3-209ENST00000519485 PCDHB11Q9Y5F2 797 aa7.51□□□□□ -1.21
CSMD3-209ENST00000519485 GPR37L1O60883 481 aa7.5□□□□□ -1.21
CSMD3-209ENST00000519485 GALNT6Q8NCL4 622 aa7.5□□□□□ -1.21
CSMD3-209ENST00000519485 KLRG1Q96E93 195 aa7.5□□□□□ -1.21
CSMD3-209ENST00000519485 IL2RAP01589 272 aa7.49□□□□□ -1.21
CSMD3-209ENST00000519485 SNRPNP63162 240 aaKnown RBP7.49□□□□□ -1.21
CSMD3-209ENST00000519485 CENPCQ03188 943 aa7.49□□□□□ -1.21
CSMD3-209ENST00000519485 BANK1Q8NDB2 785 aa7.49□□□□□ -1.21
CSMD3-209ENST00000519485 CNKSR1Q969H4 720 aa7.49□□□□□ -1.21
CSMD3-209ENST00000519485 XAGE2Q96GT9 111 aa7.49□□□□□ -1.21
CSMD3-209ENST00000519485 KRBA1A5PL33 1030 aa7.48□□□□□ -1.21
CSMD3-209ENST00000519485 SHISA8B8ZZ34 492 aa7.48□□□□□ -1.21
CSMD3-209ENST00000519485 GOLGA6L1Q8N7Z2 621 aa7.48□□□□□ -1.21
CSMD3-209ENST00000519485 FHDC1Q9C0D6 1143 aaPredicted RBP7.48□□□□□ -1.21
CSMD3-209ENST00000519485 ESF1Q9H501 851 aaKnown RBP7.48□□□□□ -1.21
CSMD3-209ENST00000519485 K7ELQ4 463 aaPredicted RBP7.47□□□□□ -1.21
CSMD3-209ENST00000519485 HOXB4P17483 251 aaPredicted RBP7.47□□□□□ -1.21
CSMD3-209ENST00000519485 C1orf229Q6ZS94 237 aaPredicted RBP7.47□□□□□ -1.21
CSMD3-209ENST00000519485 ATXN7L1Q9ULK2 861 aaPredicted RBP7.47□□□□□ -1.21
CSMD3-209ENST00000519485 BAG6P46379 1132 aa7.46□□□□□ -1.22
CSMD3-209ENST00000519485 SLCO4C1Q6ZQN7 724 aa7.46□□□□□ -1.22
CSMD3-209ENST00000519485 EDARADDQ8WWZ3 215 aa7.46□□□□□ -1.22
CSMD3-209ENST00000519485 ZSCAN10Q96SZ4 725 aaPredicted RBP7.46□□□□□ -1.22
CSMD3-209ENST00000519485 NDFIP2Q9NV92 336 aa7.46□□□□□ -1.22
CSMD3-209ENST00000519485 NDUFB9Q9Y6M9 179 aa7.46□□□□□ -1.22
CSMD3-209ENST00000519485 PIK3R2O00459 728 aa7.45□□□□□ -1.22
CSMD3-209ENST00000519485 MYCP01106 439 aaPredicted RBP7.45□□□□□ -1.22
CSMD3-209ENST00000519485 COL8A1P27658 744 aa7.45□□□□□ -1.22
CSMD3-209ENST00000519485 ESCO1Q5FWF5 840 aa7.45□□□□□ -1.22
CSMD3-209ENST00000519485 GNASQ5JWF2 1037 aa7.45□□□□□ -1.22
CSMD3-209ENST00000519485 LINC00114Q6XXX2 140 aa7.45□□□□□ -1.22
CSMD3-209ENST00000519485 CRISPLD1Q9H336 500 aa7.45□□□□□ -1.22
CSMD3-209ENST00000519485 GPAMQ9HCL2 828 aa7.45□□□□□ -1.22
CSMD3-209ENST00000519485 RAB6BQ9NRW1 208 aa7.45□□□□□ -1.22
CSMD3-209ENST00000519485 APBB1O00213 710 aa7.44□□□□□ -1.22
CSMD3-209ENST00000519485 C4orf17Q53FE4 359 aa7.44□□□□□ -1.22
CSMD3-209ENST00000519485 CEP126Q9P2H0 1117 aa7.44□□□□□ -1.22
CSMD3-209ENST00000519485 CSB-PGBD3P0DP91 1061 aa7.43□□□□□ -1.22
CSMD3-209ENST00000519485 GTF2E1P29083 439 aaPredicted RBP7.43□□□□□ -1.22
CSMD3-209ENST00000519485 EFHC2Q5JST6 749 aa7.43□□□□□ -1.22
CSMD3-209ENST00000519485 PGBD3Q8N328 593 aa7.43□□□□□ -1.22
CSMD3-209ENST00000519485 MTMR14Q8NCE2 650 aa7.43□□□□□ -1.22
CSMD3-209ENST00000519485 C2CD2LO14523 706 aa7.42□□□□□ -1.22
CSMD3-209ENST00000519485 MSX1P28360 303 aa7.42□□□□□ -1.22
CSMD3-209ENST00000519485 TMEM214Q6NUQ4 689 aaKnown RBP7.42□□□□□ -1.22
CSMD3-209ENST00000519485 PPARGC1BQ86YN6 1023 aaKnown RBP7.42□□□□□ -1.22
CSMD3-209ENST00000519485 RHBDD1Q8TEB9 315 aa7.42□□□□□ -1.22
CSMD3-209ENST00000519485 CCDC85AQ96PX6 553 aaPredicted RBP7.42□□□□□ -1.22
CSMD3-209ENST00000519485 GNB5O14775 395 aa7.41□□□□□ -1.22
CSMD3-209ENST00000519485 ARAFP10398 606 aa7.41□□□□□ -1.22
CSMD3-209ENST00000519485 BMP4P12644 408 aa7.41□□□□□ -1.22
CSMD3-209ENST00000519485 FGFR3P22607 806 aa7.41□□□□□ -1.22
CSMD3-209ENST00000519485 PHKA2P46019 1235 aa7.41□□□□□ -1.22
CSMD3-209ENST00000519485 CDCA7Q9BWT1 371 aaPredicted RBP7.41□□□□□ -1.22
CSMD3-209ENST00000519485 BNIP3LO60238 219 aa7.4□□□□□ -1.22
CSMD3-209ENST00000519485 EPXP11678 715 aa7.4□□□□□ -1.22
CSMD3-209ENST00000519485 DGKGP49619 791 aa7.4□□□□□ -1.22
CSMD3-209ENST00000519485 PHTF2Q8N3S3 785 aa7.4□□□□□ -1.22
CSMD3-209ENST00000519485 C1orf216Q8TAB5 229 aa7.4□□□□□ -1.22
CSMD3-209ENST00000519485 RUBCNLQ9H714 662 aa7.4□□□□□ -1.22
CSMD3-209ENST00000519485 RRAGCQ9HB90 399 aa7.4□□□□□ -1.22
CSMD3-209ENST00000519485 GGA1Q9UJY5 639 aa7.4□□□□□ -1.22
CSMD3-209ENST00000519485 CHIC2Q9UKJ5 165 aa7.4□□□□□ -1.22
CSMD3-209ENST00000519485 USP4Q13107 963 aa7.39□□□□□ -1.23
CSMD3-209ENST00000519485 FIGNL1Q6PIW4 674 aa7.39□□□□□ -1.23
CSMD3-209ENST00000519485 ABHD17AQ96GS6 310 aa7.39□□□□□ -1.23
CSMD3-209ENST00000519485 DNAAF2Q9NVR5 837 aaKnown RBP7.39□□□□□ -1.23
CSMD3-209ENST00000519485 NOP53Q9NZM5 478 aaKnown RBP7.39□□□□□ -1.23
CSMD3-209ENST00000519485 CTBSQ01459 385 aa7.38□□□□□ -1.23
CSMD3-209ENST00000519485 NLRP8Q86W28 1048 aa7.38□□□□□ -1.23
CSMD3-209ENST00000519485 BTBD6Q96KE9 485 aa7.38□□□□□ -1.23
CSMD3-209ENST00000519485 ETNK1Q9HBU6 452 aa7.38□□□□□ -1.23
CSMD3-209ENST00000519485 AVENQ9NQS1 362 aaPredicted RBP7.38□□□□□ -1.23
CSMD3-209ENST00000519485 FAM182BQ5T319 152 aa7.37□□□□□ -1.23
CSMD3-209ENST00000519485 Q8N3U1 123 aa7.37□□□□□ -1.23
CSMD3-209ENST00000519485 SUV39H2Q9H5I1 410 aa7.37□□□□□ -1.23
CSMD3-209ENST00000519485 PCDHGC4Q9Y5F7 938 aa7.37□□□□□ -1.23
CSMD3-209ENST00000519485 FURINP09958 794 aa7.36□□□□□ -1.23
CSMD3-209ENST00000519485 AMPD1P23109 780 aa7.36□□□□□ -1.23
CSMD3-209ENST00000519485 GRIN2CQ14957 1233 aa7.36□□□□□ -1.23
CSMD3-209ENST00000519485 RNF135Q8IUD6 432 aa7.36□□□□□ -1.23
CSMD3-209ENST00000519485 SIRT1Q96EB6 747 aa7.36□□□□□ -1.23
CSMD3-209ENST00000519485 BCANQ96GW7 911 aa7.36□□□□□ -1.23
CSMD3-209ENST00000519485 KRTAP4-8Q9BYQ9 185 aa7.36□□□□□ -1.23
CSMD3-209ENST00000519485 C1QTNF9BB2RNN3 333 aa7.35□□□□□ -1.23
CSMD3-209ENST00000519485 ATP4AP20648 1035 aa7.35□□□□□ -1.23
CSMD3-209ENST00000519485 EIF4G2P78344 907 aaKnown RBP eCLIP7.35□□□□□ -1.23
CSMD3-209ENST00000519485 TLR1Q15399 786 aa7.35□□□□□ -1.23
CSMD3-209ENST00000519485 TBC1D9Q6ZT07 1266 aa7.35□□□□□ -1.23
CSMD3-209ENST00000519485 CD163Q86VB7 1156 aa7.35□□□□□ -1.23
CSMD3-209ENST00000519485 IL27Q8NEV9 243 aa7.35□□□□□ -1.23
CSMD3-209ENST00000519485 DOLKQ9UPQ8 538 aa7.35□□□□□ -1.23
CSMD3-209ENST00000519485 ZCCHC2Q9C0B9 1178 aaKnown RBP7.34□□□□□ -1.23
CSMD3-209ENST00000519485 SNRKQ9NRH2 765 aa7.34□□□□□ -1.23
CSMD3-209ENST00000519485 INHAP05111 366 aa7.33□□□□□ -1.24
CSMD3-209ENST00000519485 ADH6P28332 368 aa7.33□□□□□ -1.24
CSMD3-209ENST00000519485 SCNN1DP51172 638 aa7.33□□□□□ -1.24
CSMD3-209ENST00000519485 NEUROD2Q15784 382 aa7.33□□□□□ -1.24
CSMD3-209ENST00000519485 ZNF295-AS1Q8N0V1 137 aa7.33□□□□□ -1.24
CSMD3-209ENST00000519485 NEURL1BA8MQ27 555 aa7.32□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms