RNA–Protein interactions for RNA: ENST00000519309.5

CTNNA1-215, Transcript of catenin alpha 1, humanhuman

TSL 3

Gene CTNNA1, Length 869 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-215ENST00000519309 MMP10P09238 476 aa11.86□□□□□ -0.51
CTNNA1-215ENST00000519309 FSTL1Q12841 308 aa11.86□□□□□ -0.51
CTNNA1-215ENST00000519309 SMIM5Q71RC9 77 aa11.86□□□□□ -0.51
CTNNA1-215ENST00000519309 DLEC1Q9Y238 1755 aa11.86□□□□□ -0.51
CTNNA1-215ENST00000519309 MYH14Q7Z406 1995 aaKnown RBP11.86□□□□□ -0.51
CTNNA1-215ENST00000519309 KCPQ6ZWJ8 1503 aa11.86□□□□□ -0.51
CTNNA1-215ENST00000519309 TONSLQ96HA7 1378 aa11.85□□□□□ -0.51
CTNNA1-215ENST00000519309 GNPATO15228 680 aa11.85□□□□□ -0.51
CTNNA1-215ENST00000519309 ITPK1Q13572 414 aa11.85□□□□□ -0.51
CTNNA1-215ENST00000519309 COL13A1Q5TAT6 717 aaPredicted RBP11.85□□□□□ -0.51
CTNNA1-215ENST00000519309 TIAM2Q8IVF5 1701 aa11.85□□□□□ -0.51
CTNNA1-215ENST00000519309 ADAMTS7Q9UKP4 1686 aa11.84□□□□□ -0.51
CTNNA1-215ENST00000519309 FYB1O15117 783 aa11.84□□□□□ -0.51
CTNNA1-215ENST00000519309 HSP90AB2PQ58FF8 381 aa11.84□□□□□ -0.51
CTNNA1-215ENST00000519309 BCS1LQ9Y276 419 aa11.84□□□□□ -0.51
CTNNA1-215ENST00000519309 TJP1Q07157 1748 aa11.83□□□□□ -0.52
CTNNA1-215ENST00000519309 ADRA2BP18089 450 aa11.83□□□□□ -0.52
CTNNA1-215ENST00000519309 GGNBP2Q9H3C7 697 aa11.83□□□□□ -0.52
CTNNA1-215ENST00000519309 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.83□□□□□ -0.527e-9■□□□□ 10.5
CTNNA1-215ENST00000519309 SLC24A1O60721 1099 aa11.82□□□□□ -0.52
CTNNA1-215ENST00000519309 PRELPP51888 382 aa11.82□□□□□ -0.52
CTNNA1-215ENST00000519309 NEUROD1Q13562 356 aa11.82□□□□□ -0.52
CTNNA1-215ENST00000519309 TMOD3Q9NYL9 352 aa11.82□□□□□ -0.52
CTNNA1-215ENST00000519309 KDM6AO15550 1401 aaPredicted RBP11.82□□□□□ -0.52
CTNNA1-215ENST00000519309 CNTNAP4Q9C0A0 1308 aa11.82□□□□□ -0.52
CTNNA1-215ENST00000519309 NRXN2Q9P2S2 1712 aa11.81□□□□□ -0.52
CTNNA1-215ENST00000519309 DPEP1P16444 411 aa11.81□□□□□ -0.52
CTNNA1-215ENST00000519309 C9orf131Q5VYM1 1079 aa11.81□□□□□ -0.52
CTNNA1-215ENST00000519309 NLGN1Q8N2Q7 840 aa11.81□□□□□ -0.52
CTNNA1-215ENST00000519309 CCDC87Q9NVE4 849 aa11.81□□□□□ -0.52
CTNNA1-215ENST00000519309 ASAP1Q9ULH1 1129 aa11.81□□□□□ -0.52
CTNNA1-215ENST00000519309 SPG7Q9UQ90 795 aa11.81□□□□□ -0.52
CTNNA1-215ENST00000519309 KDM2BQ8NHM5 1336 aa11.81□□□□□ -0.52
CTNNA1-215ENST00000519309 ZC3H4Q9UPT8 1303 aaKnown RBP11.81□□□□□ -0.52
CTNNA1-215ENST00000519309 A0A0G2JLW4 131 aa11.8□□□□□ -0.52
CTNNA1-215ENST00000519309 FCHSD2O94868 740 aa11.8□□□□□ -0.52
CTNNA1-215ENST00000519309 ATP6V1AP38606 617 aa11.8□□□□□ -0.52
CTNNA1-215ENST00000519309 HTRA3P83110 453 aa11.8□□□□□ -0.52
CTNNA1-215ENST00000519309 ARHGAP27Q6ZUM4 889 aa11.8□□□□□ -0.52
CTNNA1-215ENST00000519309 C16orf71Q8IYS4 520 aaPredicted RBP11.8□□□□□ -0.52
CTNNA1-215ENST00000519309 TNS4Q8IZW8 715 aa11.8□□□□□ -0.52
CTNNA1-215ENST00000519309 DCAF5Q96JK2 942 aa11.8□□□□□ -0.52
CTNNA1-215ENST00000519309 ST20-MTHFSA0A0A6YYL1 179 aa11.79□□□□□ -0.52
CTNNA1-215ENST00000519309 GYS1P13807 737 aa11.79□□□□□ -0.52
CTNNA1-215ENST00000519309 KCNA3P22001 575 aa11.79□□□□□ -0.52
CTNNA1-215ENST00000519309 TMF1P82094 1093 aa11.79□□□□□ -0.52
CTNNA1-215ENST00000519309 RC3H1Q5TC82 1133 aaKnown RBP11.79□□□□□ -0.52
CTNNA1-215ENST00000519309 RTCBQ9Y3I0 505 aaKnown RBP11.79□□□□□ -0.52
CTNNA1-215ENST00000519309 AFDNP55196 1824 aaKnown RBP11.79□□□□□ -0.52
CTNNA1-215ENST00000519309 PHKG2P15735 406 aa11.78□□□□□ -0.52
CTNNA1-215ENST00000519309 SLC4A9Q96Q91 983 aa11.78□□□□□ -0.52
CTNNA1-215ENST00000519309 ATG3Q9NT62 314 aa11.78□□□□□ -0.52
CTNNA1-215ENST00000519309 EMILIN1Q9Y6C2 1016 aa11.78□□□□□ -0.52
CTNNA1-215ENST00000519309 TRAPPC3LQ5T215 181 aa11.77□□□□□ -0.53
CTNNA1-215ENST00000519309 IFNL2Q8IZJ0 200 aa11.77□□□□□ -0.53
CTNNA1-215ENST00000519309 SMC1BQ8NDV3 1235 aa11.77□□□□□ -0.53
CTNNA1-215ENST00000519309 ARHGEF1Q92888 912 aaKnown RBP11.77□□□□□ -0.53
CTNNA1-215ENST00000519309 WASHC2AQ641Q2 1341 aa11.77□□□□□ -0.53
CTNNA1-215ENST00000519309 CCDC88AQ3V6T2 1871 aa11.76□□□□□ -0.53
CTNNA1-215ENST00000519309 DICER1Q9UPY3 1922 aaKnown RBP11.76□□□□□ -0.53
CTNNA1-215ENST00000519309 RNF181Q9P0P0 153 aa11.76□□□□□ -0.53
CTNNA1-215ENST00000519309 PIM2Q9P1W9 311 aa11.76□□□□□ -0.53
CTNNA1-215ENST00000519309 PARP3Q9Y6F1 533 aa11.76□□□□□ -0.53
CTNNA1-215ENST00000519309 SCN11AQ9UI33 1791 aa11.76□□□□□ -0.53
CTNNA1-215ENST00000519309 RPS6KA4O75676 772 aa11.75□□□□□ -0.53
CTNNA1-215ENST00000519309 CAPN15O75808 1086 aa11.75□□□□□ -0.53
CTNNA1-215ENST00000519309 DALRD3Q5D0E6 543 aaKnown RBP11.75□□□□□ -0.53
CTNNA1-215ENST00000519309 EYA1Q99502 592 aa11.75□□□□□ -0.53
CTNNA1-215ENST00000519309 ERVV-2B6SEH9 535 aa11.74□□□□□ -0.53
CTNNA1-215ENST00000519309 USP42Q9H9J4 1324 aaKnown RBP11.74□□□□□ -0.53
CTNNA1-215ENST00000519309 VIRMAQ69YN4 1812 aaKnown RBP11.74□□□□□ -0.53
CTNNA1-215ENST00000519309 HSPA1AP0DMV8 641 aaKnown RBP11.73□□□□□ -0.53
CTNNA1-215ENST00000519309 HSPA1BP0DMV9 641 aaKnown RBP11.73□□□□□ -0.53
CTNNA1-215ENST00000519309 RFC4P35249 363 aa11.73□□□□□ -0.53
CTNNA1-215ENST00000519309 DDR1Q08345 913 aa11.73□□□□□ -0.53
CTNNA1-215ENST00000519309 RRAGCQ9HB90 399 aa11.72□□□□□ -0.53
CTNNA1-215ENST00000519309 FER1L6Q2WGJ9 1857 aa11.72□□□□□ -0.53
CTNNA1-215ENST00000519309 MRC1P22897 1456 aa11.71□□□□□ -0.53
CTNNA1-215ENST00000519309 CARD14Q9BXL6 1004 aa11.71□□□□□ -0.53
CTNNA1-215ENST00000519309 ANKRD31Q8N7Z5 1873 aa11.71□□□□□ -0.53
CTNNA1-215ENST00000519309 ARFGEF2Q9Y6D5 1785 aa11.71□□□□□ -0.54
CTNNA1-215ENST00000519309 COL11A2P13942 1736 aaPredicted RBP11.71□□□□□ -0.54
CTNNA1-215ENST00000519309 SCN7AQ01118 1682 aa11.71□□□□□ -0.54
CTNNA1-215ENST00000519309 UBR2Q8IWV8 1755 aa11.7□□□□□ -0.54
CTNNA1-215ENST00000519309 POLRMTO00411 1230 aaKnown RBP11.7□□□□□ -0.54
CTNNA1-215ENST00000519309 HSP90AB1P08238 724 aaKnown RBP11.7□□□□□ -0.54
CTNNA1-215ENST00000519309 CRKLP46109 303 aaKnown RBP11.7□□□□□ -0.54
CTNNA1-215ENST00000519309 FKBP8Q14318 412 aa11.7□□□□□ -0.54
CTNNA1-215ENST00000519309 CDCA8Q53HL2 280 aa11.7□□□□□ -0.54
CTNNA1-215ENST00000519309 RBM42Q9BTD8 480 aaKnown RBP11.7□□□□□ -0.54
CTNNA1-215ENST00000519309 GLTPD2A6NH11 291 aa11.69□□□□□ -0.54
CTNNA1-215ENST00000519309 CHRNA5P30532 468 aa11.69□□□□□ -0.54
CTNNA1-215ENST00000519309 RASSF7Q02833 373 aa11.69□□□□□ -0.54
CTNNA1-215ENST00000519309 SRP68Q9UHB9 627 aaKnown RBP11.69□□□□□ -0.54
CTNNA1-215ENST00000519309 VEGFAP15692 232 aaPredicted RBP11.68□□□□□ -0.54
CTNNA1-215ENST00000519309 LMNB1P20700 586 aa11.68□□□□□ -0.54
CTNNA1-215ENST00000519309 EIF4A2Q14240 407 aaKnown RBP11.68□□□□□ -0.54
CTNNA1-215ENST00000519309 POLKQ9UBT6 870 aa11.68□□□□□ -0.54
CTNNA1-215ENST00000519309 TM4SF1P30408 202 aa11.67□□□□□ -0.54
CTNNA1-215ENST00000519309 SOS1Q07889 1333 aaPredicted RBP11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms