RNA–Protein interactions for RNA: ENST00000519254.2

CLN8-204, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CLN8, Length 1,769 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-204ENST00000519254 CHL1O00533 1208 aa18.6■□□□□ 0.57
CLN8-204ENST00000519254 HSP90AB1P08238 724 aaKnown RBP18.6■□□□□ 0.57
CLN8-204ENST00000519254 MYT1Q01538 1121 aa18.6■□□□□ 0.57
CLN8-204ENST00000519254 BARGINQ6ZT62 677 aa18.6■□□□□ 0.57
CLN8-204ENST00000519254 FRAT1Q92837 279 aaPredicted RBP18.6■□□□□ 0.57
CLN8-204ENST00000519254 SCN11AQ9UI33 1791 aa18.59■□□□□ 0.57
CLN8-204ENST00000519254 CANXP27824 592 aaKnown RBP18.59■□□□□ 0.57
CLN8-204ENST00000519254 TAF7Q15545 349 aaPredicted RBP18.59■□□□□ 0.57
CLN8-204ENST00000519254 DCAF5Q96JK2 942 aa18.59■□□□□ 0.57
CLN8-204ENST00000519254 TNS2Q63HR2 1409 aa18.59■□□□□ 0.57
CLN8-204ENST00000519254 ADAMTS7Q9UKP4 1686 aa18.58■□□□□ 0.57
CLN8-204ENST00000519254 DDB1Q16531 1140 aa18.58■□□□□ 0.57
CLN8-204ENST00000519254 PANK1Q8TE04 598 aa18.58■□□□□ 0.57
CLN8-204ENST00000519254 SSH1Q8WYL5 1049 aa18.58■□□□□ 0.57
CLN8-204ENST00000519254 TRPC5Q9UL62 973 aaPredicted RBP18.58■□□□□ 0.56
CLN8-204ENST00000519254 TNNQ9UQP3 1299 aa18.57■□□□□ 0.56
CLN8-204ENST00000519254 ELL2O00472 640 aaPredicted RBP18.56■□□□□ 0.56
CLN8-204ENST00000519254 ATRNO75882 1429 aa18.56■□□□□ 0.56
CLN8-204ENST00000519254 GJD4Q96KN9 370 aaPredicted RBP18.56■□□□□ 0.56
CLN8-204ENST00000519254 GLI3P10071 1580 aa18.56■□□□□ 0.56
CLN8-204ENST00000519254 BTBD11A6QL63 1104 aa18.55■□□□□ 0.56
CLN8-204ENST00000519254 RLBP1P12271 317 aa18.55■□□□□ 0.56
CLN8-204ENST00000519254 SMC4Q9NTJ3 1288 aa18.55■□□□□ 0.56
CLN8-204ENST00000519254 VAMP4O75379 141 aa18.55■□□□□ 0.56
CLN8-204ENST00000519254 KRT24Q2M2I5 525 aa18.55■□□□□ 0.56
CLN8-204ENST00000519254 QTRT2Q9H974 415 aaKnown RBP18.55■□□□□ 0.56
CLN8-204ENST00000519254 SLC52A2Q9HAB3 445 aa18.55■□□□□ 0.56
CLN8-204ENST00000519254 CABP4P57796 275 aa18.54■□□□□ 0.56
CLN8-204ENST00000519254 TSPYL6Q8N831 410 aa18.54■□□□□ 0.56
CLN8-204ENST00000519254 C8orf58Q8NAV2 365 aa18.54■□□□□ 0.56
CLN8-204ENST00000519254 NFATC2IPQ8NCF5 419 aa18.54■□□□□ 0.56
CLN8-204ENST00000519254 COG6Q9Y2V7 657 aa18.54■□□□□ 0.56
CLN8-204ENST00000519254 SIPA1L3O60292 1781 aaPredicted RBP18.54■□□□□ 0.56
CLN8-204ENST00000519254 NKX1-1Q15270 411 aaPredicted RBP18.53■□□□□ 0.56
CLN8-204ENST00000519254 ALDH1L2Q3SY69 923 aa18.53■□□□□ 0.56
CLN8-204ENST00000519254 ZKSCAN2Q63HK3 967 aa18.53■□□□□ 0.56
CLN8-204ENST00000519254 ZNF428Q96B54 188 aa18.53■□□□□ 0.56
CLN8-204ENST00000519254 MRC1P22897 1456 aa18.53■□□□□ 0.56
CLN8-204ENST00000519254 TWISTNBQ3B726 338 aaPredicted RBP18.53■□□□□ 0.56
CLN8-204ENST00000519254 TOGARAM1Q9Y4F4 1720 aa18.52■□□□□ 0.56
CLN8-204ENST00000519254 KDM3BQ7LBC6 1761 aa18.52■□□□□ 0.55
CLN8-204ENST00000519254 BABAM1Q9NWV8 329 aa18.52■□□□□ 0.55
CLN8-204ENST00000519254 KCNQ3O43525 872 aa18.51■□□□□ 0.55
CLN8-204ENST00000519254 KDM2BQ8NHM5 1336 aa18.51■□□□□ 0.55
CLN8-204ENST00000519254 BRPF1P55201 1214 aaPredicted RBP18.5■□□□□ 0.55
CLN8-204ENST00000519254 MARCH10Q8NA82 808 aaPredicted RBP18.5■□□□□ 0.55
CLN8-204ENST00000519254 THSD7AQ9UPZ6 1657 aa18.5■□□□□ 0.55
CLN8-204ENST00000519254 ERVV-2B6SEH9 535 aa18.5■□□□□ 0.55
CLN8-204ENST00000519254 SLC39A6Q13433 755 aa18.5■□□□□ 0.55
CLN8-204ENST00000519254 CLUAP1Q96AJ1 413 aa18.5■□□□□ 0.55
CLN8-204ENST00000519254 NOB1Q9ULX3 412 aaKnown RBP18.5■□□□□ 0.55
CLN8-204ENST00000519254 TRIM27P14373 513 aa18.49■□□□□ 0.55
CLN8-204ENST00000519254 ZNF772Q68DY9 489 aaPredicted RBP18.49■□□□□ 0.55
CLN8-204ENST00000519254 ATF7IPQ6VMQ6 1270 aa18.48■□□□□ 0.55
CLN8-204ENST00000519254 DZIP1LQ8IYY4 767 aaKnown RBP18.48■□□□□ 0.55
CLN8-204ENST00000519254 DOT1LQ8TEK3 1739 aa18.48■□□□□ 0.55
CLN8-204ENST00000519254 KIF16BQ96L93 1317 aa18.48■□□□□ 0.55
CLN8-204ENST00000519254 TCERG1O14776 1098 aaKnown RBP18.47■□□□□ 0.55
CLN8-204ENST00000519254 MS4A1P11836 297 aa18.47■□□□□ 0.55
CLN8-204ENST00000519254 SYTL4Q96C24 671 aaPredicted RBP18.47■□□□□ 0.55
CLN8-204ENST00000519254 TMOD3Q9NYL9 352 aa18.47■□□□□ 0.55
CLN8-204ENST00000519254 EIF4A1P60842 406 aaKnown RBP18.47■□□□□ 0.55
CLN8-204ENST00000519254 MRPL50Q8N5N7 158 aaKnown RBP18.47■□□□□ 0.55
CLN8-204ENST00000519254 AAMPQ13685 434 aa18.46■□□□□ 0.55
CLN8-204ENST00000519254 MVPQ14764 893 aaKnown RBP18.46■□□□□ 0.55
CLN8-204ENST00000519254 ZNF790Q6PG37 636 aa18.46■□□□□ 0.55
CLN8-204ENST00000519254 CENPQQ7L2Z9 268 aaPredicted RBP18.46■□□□□ 0.55
CLN8-204ENST00000519254 SEPT12Q8IYM1 358 aa18.46■□□□□ 0.55
CLN8-204ENST00000519254 TTC5Q8N0Z6 440 aa18.46■□□□□ 0.55
CLN8-204ENST00000519254 IPO8O15397 1037 aaKnown RBP18.45■□□□□ 0.54
CLN8-204ENST00000519254 FTSJ3Q8IY81 847 aaKnown RBP18.45■□□□□ 0.54
CLN8-204ENST00000519254 ACSBG1Q96GR2 724 aa18.45■□□□□ 0.54
CLN8-204ENST00000519254 ITGB4P16144 1822 aa18.45■□□□□ 0.54
CLN8-204ENST00000519254 KAT6BQ8WYB5 2073 aa18.44■□□□□ 0.54
CLN8-204ENST00000519254 NECTIN2Q92692 538 aa18.44■□□□□ 0.54
CLN8-204ENST00000519254 PRIM1P49642 420 aaKnown RBP18.43■□□□□ 0.54
CLN8-204ENST00000519254 FAM182BQ5T319 152 aa18.43■□□□□ 0.54
CLN8-204ENST00000519254 PIGBQ92521 554 aa18.43■□□□□ 0.54
CLN8-204ENST00000519254 ONECUT3O60422 494 aaPredicted RBP18.42■□□□□ 0.54
CLN8-204ENST00000519254 RBM19Q9Y4C8 960 aaKnown RBP18.42■□□□□ 0.54
CLN8-204ENST00000519254 IGHDP01880 384 aa18.42■□□□□ 0.54
CLN8-204ENST00000519254 ARHGAP45Q92619 1136 aa18.42■□□□□ 0.54
CLN8-204ENST00000519254 ZNF496Q96IT1 587 aaPredicted RBP18.42■□□□□ 0.54
CLN8-204ENST00000519254 PAPPAQ13219 1627 aa18.41■□□□□ 0.54
CLN8-204ENST00000519254 RBM6P78332 1123 aaKnown RBP18.41■□□□□ 0.54
CLN8-204ENST00000519254 BCL9O00512 1426 aa18.41■□□□□ 0.54
CLN8-204ENST00000519254 PRAMEF22A3QJZ6 481 aa18.4■□□□□ 0.54
CLN8-204ENST00000519254 EIF2S2P20042 333 aaKnown RBP18.4■□□□□ 0.54
CLN8-204ENST00000519254 TMEM57Q8N5G2 664 aa18.4■□□□□ 0.54
CLN8-204ENST00000519254 PCDHB15Q9Y5E8 787 aa18.4■□□□□ 0.54
CLN8-204ENST00000519254 PTCD1O75127 700 aaKnown RBP18.4■□□□□ 0.54
CLN8-204ENST00000519254 HDGFL1Q5TGJ6 251 aa18.4■□□□□ 0.54
CLN8-204ENST00000519254 FMNL2Q96PY5 1086 aa18.4■□□□□ 0.54
CLN8-204ENST00000519254 ASAP1Q9ULH1 1129 aa18.4■□□□□ 0.54
CLN8-204ENST00000519254 GIGYF1O75420 1035 aaPredicted RBP18.39■□□□□ 0.53
CLN8-204ENST00000519254 SKAP1Q86WV1 359 aa18.39■□□□□ 0.53
CLN8-204ENST00000519254 RGS17Q9UGC6 210 aaPredicted RBP18.39■□□□□ 0.53
CLN8-204ENST00000519254 C5P01031 1676 aa18.39■□□□□ 0.53
CLN8-204ENST00000519254 HEG1Q9ULI3 1381 aa18.38■□□□□ 0.53
CLN8-204ENST00000519254 CCDC30Q5VVM6 783 aa18.38■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms