RNA–Protein interactions for RNA: ENST00000518587.1

NPM1-205, Transcript of nucleophosmin 1, humanhuman

TSL 2

Gene NPM1, Length 670 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPM1-205ENST00000518587 JCADQ9P266 1359 aa9.43□□□□□ -0.9
NPM1-205ENST00000518587 ADH1BP00325 375 aa9.43□□□□□ -0.9
NPM1-205ENST00000518587 CSPP1Q1MSJ5 1256 aa9.43□□□□□ -0.9
NPM1-205ENST00000518587 FAM160A2Q8N612 972 aaPredicted RBP9.43□□□□□ -0.9
NPM1-205ENST00000518587 SLC26A8Q96RN1 970 aa9.43□□□□□ -0.9
NPM1-205ENST00000518587 E9PCH4 1651 aa9.42□□□□□ -0.9
NPM1-205ENST00000518587 C6orf229H3BNL8 230 aa9.42□□□□□ -0.9
NPM1-205ENST00000518587 QPCTQ16769 361 aa9.42□□□□□ -0.9
NPM1-205ENST00000518587 GNL3Q9BVP2 549 aaKnown RBP eCLIP9.42□□□□□ -0.9
NPM1-205ENST00000518587 C19orf44Q9H6X5 657 aa9.42□□□□□ -0.9
NPM1-205ENST00000518587 SLAIN2Q9P270 581 aa9.42□□□□□ -0.9
NPM1-205ENST00000518587 SPATA31A6Q5VVP1 1343 aa9.41□□□□□ -0.9
NPM1-205ENST00000518587 LILRB3O75022 631 aa9.41□□□□□ -0.9
NPM1-205ENST00000518587 ATF3P18847 181 aa9.41□□□□□ -0.9
NPM1-205ENST00000518587 HRCP23327 699 aa9.41□□□□□ -0.9
NPM1-205ENST00000518587 TMEM132AQ24JP5 1023 aa9.41□□□□□ -0.9
NPM1-205ENST00000518587 PRPF38BQ5VTL8 546 aaKnown RBP9.41□□□□□ -0.9
NPM1-205ENST00000518587 CABLES1Q8TDN4 633 aa9.41□□□□□ -0.9
NPM1-205ENST00000518587 USB1Q9BQ65 265 aaKnown RBP9.41□□□□□ -0.9
NPM1-205ENST00000518587 MTMR2Q13614 643 aa9.4□□□□□ -0.9
NPM1-205ENST00000518587 C14orf37Q86TY3 774 aa9.4□□□□□ -0.9
NPM1-205ENST00000518587 RETREG3Q86VR2 466 aa9.4□□□□□ -0.9
NPM1-205ENST00000518587 PCMTD1Q96MG8 357 aaPredicted RBP9.4□□□□□ -0.9
NPM1-205ENST00000518587 ADAMTS13Q76LX8 1427 aa9.39□□□□□ -0.91
NPM1-205ENST00000518587 SPHKAPQ2M3C7 1700 aa9.39□□□□□ -0.91
NPM1-205ENST00000518587 SETBP1Q9Y6X0 1596 aa9.39□□□□□ -0.91
NPM1-205ENST00000518587 ZBTB3Q9H5J0 574 aa9.39□□□□□ -0.91
NPM1-205ENST00000518587 MYO5BQ9ULV0 1848 aa9.39□□□□□ -0.91
NPM1-205ENST00000518587 PHLPP1O60346 1717 aa9.39□□□□□ -0.91
NPM1-205ENST00000518587 AHDC1Q5TGY3 1603 aaPredicted RBP9.38□□□□□ -0.91
NPM1-205ENST00000518587 SPDYE5A6NIY4 337 aa9.38□□□□□ -0.91
NPM1-205ENST00000518587 MSS51Q4VC12 460 aa9.38□□□□□ -0.91
NPM1-205ENST00000518587 SLC6A16Q9GZN6 736 aa9.38□□□□□ -0.91
NPM1-205ENST00000518587 RRBP1Q9P2E9 1410 aaKnown RBP9.38□□□□□ -0.91
NPM1-205ENST00000518587 NUTM2BA6NNL0 878 aaPredicted RBP9.37□□□□□ -0.91
NPM1-205ENST00000518587 NUTM2EB1AL46 878 aaPredicted RBP9.37□□□□□ -0.91
NPM1-205ENST00000518587 S1PR4O95977 384 aa9.37□□□□□ -0.91
NPM1-205ENST00000518587 RTL5Q5HYW3 569 aaPredicted RBP9.37□□□□□ -0.91
NPM1-205ENST00000518587 NUTM2DQ5VT03 806 aaPredicted RBP9.37□□□□□ -0.91
NPM1-205ENST00000518587 ZNF772Q68DY9 489 aaPredicted RBP9.37□□□□□ -0.91
NPM1-205ENST00000518587 PPP1R18Q6NYC8 613 aa9.37□□□□□ -0.91
NPM1-205ENST00000518587 NUTM2AQ8IVF1 878 aaPredicted RBP9.37□□□□□ -0.91
NPM1-205ENST00000518587 PRDM9Q9NQV7 894 aa9.37□□□□□ -0.91
NPM1-205ENST00000518587 RPGRIP1LQ68CZ1 1315 aa9.36□□□□□ -0.91
NPM1-205ENST00000518587 CFAP99D6REC4 459 aa9.36□□□□□ -0.91
NPM1-205ENST00000518587 PRR7Q8TB68 274 aa9.36□□□□□ -0.91
NPM1-205ENST00000518587 AMOTL2Q9Y2J4 779 aa9.36□□□□□ -0.91
NPM1-205ENST00000518587 A0A0G2JS52 829 aa9.35□□□□□ -0.91
NPM1-205ENST00000518587 ZNF326Q5BKZ1 582 aaKnown RBP9.35□□□□□ -0.91
NPM1-205ENST00000518587 PPP2R2DQ66LE6 453 aa9.35□□□□□ -0.91
NPM1-205ENST00000518587 EIF4ENIF1Q9NRA8 985 aaKnown RBP9.35□□□□□ -0.91
NPM1-205ENST00000518587 SIPA1L2Q9P2F8 1722 aaPredicted RBP9.35□□□□□ -0.91
NPM1-205ENST00000518587 KIF1BO60333 1816 aa9.35□□□□□ -0.91
NPM1-205ENST00000518587 SHPRHQ149N8 1683 aa9.35□□□□□ -0.91
NPM1-205ENST00000518587 COL16A1Q07092 1604 aaPredicted RBP9.34□□□□□ -0.91
NPM1-205ENST00000518587 XRN1Q8IZH2 1706 aaKnown RBP9.34□□□□□ -0.91
NPM1-205ENST00000518587 HFM1A2PYH4 1435 aa9.34□□□□□ -0.91
NPM1-205ENST00000518587 PRAG1Q86YV5 1406 aa9.34□□□□□ -0.91
NPM1-205ENST00000518587 MMP16P51512 607 aa9.34□□□□□ -0.91
NPM1-205ENST00000518587 PODXL2Q9NZ53 605 aa9.34□□□□□ -0.91
NPM1-205ENST00000518587 PTCH1Q13635 1447 aa9.33□□□□□ -0.92
NPM1-205ENST00000518587 RNF223E7ERA6 249 aa9.33□□□□□ -0.92
NPM1-205ENST00000518587 PPEF1O14829 653 aaPredicted RBP9.33□□□□□ -0.92
NPM1-205ENST00000518587 DXOO77932 396 aaKnown RBP9.33□□□□□ -0.92
NPM1-205ENST00000518587 NAIPQ13075 1403 aa9.32□□□□□ -0.92
NPM1-205ENST00000518587 SETD5Q9C0A6 1442 aa9.32□□□□□ -0.92
NPM1-205ENST00000518587 ADGRL3Q9HAR2 1447 aa9.32□□□□□ -0.92
NPM1-205ENST00000518587 JUNDP17535 347 aa9.32□□□□□ -0.92
NPM1-205ENST00000518587 GGCXP38435 758 aa9.32□□□□□ -0.92
NPM1-205ENST00000518587 ITGAEP38570 1179 aa9.32□□□□□ -0.92
NPM1-205ENST00000518587 MEX3CQ5U5Q3 659 aaKnown RBP9.32□□□□□ -0.92
NPM1-205ENST00000518587 LRRC59Q96AG4 307 aaKnown RBP9.32□□□□□ -0.92
NPM1-205ENST00000518587 CDK12Q9NYV4 1490 aaPredicted RBP9.32□□□□□ -0.92
NPM1-205ENST00000518587 DESI1Q6ICB0 168 aa9.31□□□□□ -0.92
NPM1-205ENST00000518587 RGS17Q9UGC6 210 aaPredicted RBP9.31□□□□□ -0.92
NPM1-205ENST00000518587 NRXN3Q9Y4C0 1643 aa9.31□□□□□ -0.92
NPM1-205ENST00000518587 NEXMIFQ5QGS0 1516 aa9.31□□□□□ -0.92
NPM1-205ENST00000518587 RFC5P40937 340 aa9.3□□□□□ -0.92
NPM1-205ENST00000518587 BRINP3Q76B58 766 aa9.3□□□□□ -0.92
NPM1-205ENST00000518587 CLTCL1P53675 1640 aa9.3□□□□□ -0.92
NPM1-205ENST00000518587 ASXL1Q8IXJ9 1541 aa9.3□□□□□ -0.92
NPM1-205ENST00000518587 MST1RQ04912 1400 aa9.3□□□□□ -0.92
NPM1-205ENST00000518587 NHSL1Q5SYE7 1610 aa9.29□□□□□ -0.92
NPM1-205ENST00000518587 PTPRUQ92729 1446 aa9.29□□□□□ -0.92
NPM1-205ENST00000518587 ANKRD30BQ9BXX2 1392 aa9.28□□□□□ -0.92
NPM1-205ENST00000518587 LYPD8Q6UX82 237 aa9.28□□□□□ -0.92
NPM1-205ENST00000518587 ANKLE1Q8NAG6 615 aa9.28□□□□□ -0.92
NPM1-205ENST00000518587 TSC1Q92574 1164 aa9.28□□□□□ -0.92
NPM1-205ENST00000518587 FCF1Q9Y324 198 aaKnown RBP9.28□□□□□ -0.92
NPM1-205ENST00000518587 SETD1AO15047 1707 aaKnown RBP9.28□□□□□ -0.92
NPM1-205ENST00000518587 LAMC1P11047 1609 aa9.27□□□□□ -0.92
NPM1-205ENST00000518587 LRPPRCP42704 1394 aaKnown RBP9.27□□□□□ -0.93
NPM1-205ENST00000518587 CTDSPL2Q05D32 466 aa9.27□□□□□ -0.93
NPM1-205ENST00000518587 PLA2G2CQ5R387 149 aa9.27□□□□□ -0.93
NPM1-205ENST00000518587 POTEAQ6S8J7 498 aa9.27□□□□□ -0.93
NPM1-205ENST00000518587 TRIM52Q96A61 297 aa9.27□□□□□ -0.93
NPM1-205ENST00000518587 CCDC144AA2RUR9 1427 aa9.27□□□□□ -0.93
NPM1-205ENST00000518587 METP08581 1390 aa9.26□□□□□ -0.93
NPM1-205ENST00000518587 PER1O15534 1290 aaPredicted RBP9.26□□□□□ -0.93
NPM1-205ENST00000518587 AP1G2O75843 785 aa9.26□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 60 ms