RNA–Protein interactions for RNA: ENST00000518498.1

TFF3-204, Transcript of trefoil factor 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TFF3, Length 1,109 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TFF3-204ENST00000518498 GNPATO15228 680 aa24.73■■□□□ 1.55
TFF3-204ENST00000518498 UBR3Q6ZT12 1888 aa24.72■■□□□ 1.55
TFF3-204ENST00000518498 IGSF1Q8N6C5 1336 aa24.71■■□□□ 1.55
TFF3-204ENST00000518498 KIF7Q2M1P5 1343 aa24.7■■□□□ 1.54
TFF3-204ENST00000518498 ERVV-2B6SEH9 535 aa24.7■■□□□ 1.54
TFF3-204ENST00000518498 ATP10DQ9P241 1426 aa24.69■■□□□ 1.54
TFF3-204ENST00000518498 GOLGB1Q14789 3259 aaKnown RBP24.69■■□□□ 1.54
TFF3-204ENST00000518498 HSP90AB1P08238 724 aaKnown RBP24.69■■□□□ 1.54
TFF3-204ENST00000518498 PLEKHO1Q53GL0 409 aaPredicted RBP24.69■■□□□ 1.54
TFF3-204ENST00000518498 PANK3Q9H999 370 aa24.69■■□□□ 1.54
TFF3-204ENST00000518498 PLEKHG2Q9H7P9 1386 aa24.68■■□□□ 1.54
TFF3-204ENST00000518498 TRAPPC3LQ5T215 181 aa24.68■■□□□ 1.54
TFF3-204ENST00000518498 GPBP1L1Q9HC44 474 aaPredicted RBP24.68■■□□□ 1.54
TFF3-204ENST00000518498 WWC3Q9ULE0 1092 aa24.68■■□□□ 1.54
TFF3-204ENST00000518498 DCAF5Q96JK2 942 aa24.67■■□□□ 1.54
TFF3-204ENST00000518498 RBM42Q9BTD8 480 aaKnown RBP24.67■■□□□ 1.54
TFF3-204ENST00000518498 RTCBQ9Y3I0 505 aaKnown RBP24.67■■□□□ 1.54
TFF3-204ENST00000518498 MMP10P09238 476 aa24.65■■□□□ 1.54
TFF3-204ENST00000518498 AMOTQ4VCS5 1084 aa24.65■■□□□ 1.54
TFF3-204ENST00000518498 RC3H1Q5TC82 1133 aaKnown RBP24.64■■□□□ 1.54
TFF3-204ENST00000518498 NLGN1Q8N2Q7 840 aa24.64■■□□□ 1.54
TFF3-204ENST00000518498 CABP4P57796 275 aa24.63■■□□□ 1.53
TFF3-204ENST00000518498 ZNF526Q8TF50 670 aaPredicted RBP24.63■■□□□ 1.53
TFF3-204ENST00000518498 SLC4A9Q96Q91 983 aa24.63■■□□□ 1.53
TFF3-204ENST00000518498 ZNF530Q6P9A1 599 aaPredicted RBP24.62■■□□□ 1.53
TFF3-204ENST00000518498 MORC1Q86VD1 984 aa24.61■■□□□ 1.53
TFF3-204ENST00000518498 ARHGEF1Q92888 912 aaKnown RBP24.61■■□□□ 1.53
TFF3-204ENST00000518498 ADCY9O60503 1353 aa24.6■■□□□ 1.53
TFF3-204ENST00000518498 KDRP35968 1356 aa24.6■■□□□ 1.53
TFF3-204ENST00000518498 ADRA2BP18089 450 aa24.6■■□□□ 1.53
TFF3-204ENST00000518498 MTHFSP49914 203 aa24.6■■□□□ 1.53
TFF3-204ENST00000518498 TGFB2P61812 414 aa24.6■■□□□ 1.53
TFF3-204ENST00000518498 RPS6KA4O75676 772 aa24.59■■□□□ 1.53
TFF3-204ENST00000518498 RFC4P35249 363 aa24.59■■□□□ 1.53
TFF3-204ENST00000518498 C1orf141Q5JVX7 400 aa24.58■■□□□ 1.53
TFF3-204ENST00000518498 CNTNAP4Q9C0A0 1308 aa24.58■■□□□ 1.52
TFF3-204ENST00000518498 DDX10Q13206 875 aaKnown RBP24.57■■□□□ 1.52
TFF3-204ENST00000518498 A0A0G2JLW4 131 aa24.56■■□□□ 1.52
TFF3-204ENST00000518498 AEBP1Q8IUX7 1158 aa24.56■■□□□ 1.52
TFF3-204ENST00000518498 NFATC2IPQ8NCF5 419 aa24.56■■□□□ 1.52
TFF3-204ENST00000518498 ZNF831Q5JPB2 1677 aa24.56■■□□□ 1.52
TFF3-204ENST00000518498 PTCD1O75127 700 aaKnown RBP24.55■■□□□ 1.52
TFF3-204ENST00000518498 GYS1P13807 737 aa24.55■■□□□ 1.52
TFF3-204ENST00000518498 SULT6B1Q6IMI4 303 aa24.55■■□□□ 1.52
TFF3-204ENST00000518498 CCDC87Q9NVE4 849 aa24.55■■□□□ 1.52
TFF3-204ENST00000518498 PARP3Q9Y6F1 533 aa24.55■■□□□ 1.52
TFF3-204ENST00000518498 KDM6AO15550 1401 aaPredicted RBP24.54■■□□□ 1.52
TFF3-204ENST00000518498 BCS1LQ9Y276 419 aa24.54■■□□□ 1.52
TFF3-204ENST00000518498 KNSTRNQ9Y448 316 aa24.54■■□□□ 1.52
TFF3-204ENST00000518498 PXDNLA1KZ92 1463 aa24.52■■□□□ 1.52
TFF3-204ENST00000518498 CICQ96RK0 1608 aaPredicted RBP24.51■■□□□ 1.51
TFF3-204ENST00000518498 HSPA6P17066 643 aa24.51■■□□□ 1.51
TFF3-204ENST00000518498 DIEXFQ68CQ4 756 aaKnown RBP24.51■■□□□ 1.51
TFF3-204ENST00000518498 DPEP1P16444 411 aa24.5■■□□□ 1.51
TFF3-204ENST00000518498 IL13P35225 146 aa24.5■■□□□ 1.51
TFF3-204ENST00000518498 CRKLP46109 303 aaKnown RBP24.5■■□□□ 1.51
TFF3-204ENST00000518498 ARHGAP27Q6ZUM4 889 aa24.5■■□□□ 1.51
TFF3-204ENST00000518498 COL5A3P25940 1745 aaPredicted RBP24.49■■□□□ 1.51
TFF3-204ENST00000518498 KIF13BQ9NQT8 1826 aa24.49■■□□□ 1.51
TFF3-204ENST00000518498 C10orf71Q711Q0 1435 aa24.49■■□□□ 1.51
TFF3-204ENST00000518498 KIF3CO14782 793 aa24.48■■□□□ 1.51
TFF3-204ENST00000518498 FCHSD2O94868 740 aa24.48■■□□□ 1.51
TFF3-204ENST00000518498 N4BP2Q86UW6 1770 aaPredicted RBP24.47■■□□□ 1.51
TFF3-204ENST00000518498 AKAP4Q5JQC9 854 aa24.46■■□□□ 1.51
TFF3-204ENST00000518498 C4AP0C0L4 1744 aa24.46■■□□□ 1.51
TFF3-204ENST00000518498 KIAA1551Q9HCM1 1747 aa24.45■■□□□ 1.5
TFF3-204ENST00000518498 SRP68Q9UHB9 627 aaKnown RBP24.45■■□□□ 1.5
TFF3-204ENST00000518498 KCNA3P22001 575 aa24.44■■□□□ 1.5
TFF3-204ENST00000518498 FKBP8Q14318 412 aa24.44■■□□□ 1.5
TFF3-204ENST00000518498 PIM2Q9P1W9 311 aa24.44■■□□□ 1.5
TFF3-204ENST00000518498 MYH14Q7Z406 1995 aaKnown RBP24.43■■□□□ 1.5
TFF3-204ENST00000518498 INTS5Q6P9B9 1019 aaKnown RBP24.43■■□□□ 1.5
TFF3-204ENST00000518498 LGR6Q9HBX8 967 aa24.43■■□□□ 1.5
TFF3-204ENST00000518498 USP42Q9H9J4 1324 aaKnown RBP24.42■■□□□ 1.5
TFF3-204ENST00000518498 AMER1Q5JTC6 1135 aaPredicted RBP24.42■■□□□ 1.5
TFF3-204ENST00000518498 SLC52A2Q9HAB3 445 aa24.42■■□□□ 1.5
TFF3-204ENST00000518498 DNAJC10Q8IXB1 793 aa24.4■■□□□ 1.5
TFF3-204ENST00000518498 ZPR1O75312 459 aa24.39■■□□□ 1.49
TFF3-204ENST00000518498 TOMM70O94826 608 aa24.39■■□□□ 1.49
TFF3-204ENST00000518498 TM4SF1P30408 202 aa24.39■■□□□ 1.49
TFF3-204ENST00000518498 DDR1Q08345 913 aa24.39■■□□□ 1.49
TFF3-204ENST00000518498 DALRD3Q5D0E6 543 aaKnown RBP24.39■■□□□ 1.49
TFF3-204ENST00000518498 IFFO2Q5TF58 517 aa24.39■■□□□ 1.49
TFF3-204ENST00000518498 RNMTO43148 476 aaKnown RBP24.38■■□□□ 1.49
TFF3-204ENST00000518498 HMOX1P09601 288 aa24.38■■□□□ 1.49
TFF3-204ENST00000518498 SCN11AQ9UI33 1791 aa24.38■■□□□ 1.49
TFF3-204ENST00000518498 C9orf131Q5VYM1 1079 aa24.37■■□□□ 1.49
TFF3-204ENST00000518498 USPL1Q5W0Q7 1092 aa24.37■■□□□ 1.49
TFF3-204ENST00000518498 TJP1Q07157 1748 aa24.37■■□□□ 1.49
TFF3-204ENST00000518498 CYP19A1P11511 503 aaPredicted RBP24.36■■□□□ 1.49
TFF3-204ENST00000518498 SLC39A6Q13433 755 aa24.36■■□□□ 1.49
TFF3-204ENST00000518498 CEP350Q5VT06 3117 aa24.35■■□□□ 1.49
TFF3-204ENST00000518498 POLRMTO00411 1230 aaKnown RBP24.35■■□□□ 1.49
TFF3-204ENST00000518498 NMRK2Q9NPI5 230 aa24.35■■□□□ 1.49
TFF3-204ENST00000518498 DIAPH1O60610 1272 aaKnown RBP24.34■■□□□ 1.49
TFF3-204ENST00000518498 CHRNA5P30532 468 aa24.34■■□□□ 1.49
TFF3-204ENST00000518498 APLP1P51693 650 aa24.34■■□□□ 1.49
TFF3-204ENST00000518498 MTHFSDQ2M296 383 aaKnown RBP24.34■■□□□ 1.49
TFF3-204ENST00000518498 SOS1Q07889 1333 aaPredicted RBP24.34■■□□□ 1.49
TFF3-204ENST00000518498 BRCA1P38398 1863 aaKnown RBP24.33■■□□□ 1.49
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms