RNA–Protein interactions for RNA: ENST00000518385.5

SDC2-202, Transcript of syndecan 2, humanhuman

TSL 5 BASIC

Gene SDC2, Length 1,583 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC2-202ENST00000518385 COL14A1Q05707 1796 aaKnown RBP22.94■■□□□ 1.26
SDC2-202ENST00000518385 LRRC37A3O60309 1634 aa22.94■■□□□ 1.26
SDC2-202ENST00000518385 EVA1CP58658 441 aa22.93■■□□□ 1.26
SDC2-202ENST00000518385 ITPRIPQ8IWB1 547 aa22.93■■□□□ 1.26
SDC2-202ENST00000518385 RAPGEF4Q8WZA2 1011 aa22.93■■□□□ 1.26
SDC2-202ENST00000518385 TBC1D32Q96NH3 1257 aa22.93■■□□□ 1.26
SDC2-202ENST00000518385 BRPF3Q9ULD4 1205 aa22.93■■□□□ 1.26
SDC2-202ENST00000518385 TOM1L2Q6ZVM7 507 aa22.93■■□□□ 1.26
SDC2-202ENST00000518385 TMEM57Q8N5G2 664 aa22.93■■□□□ 1.26
SDC2-202ENST00000518385 HDAC1Q13547 482 aaPredicted RBP22.92■■□□□ 1.26
SDC2-202ENST00000518385 CARD10Q9BWT7 1032 aa22.92■■□□□ 1.26
SDC2-202ENST00000518385 BTG4Q9NY30 223 aa22.92■■□□□ 1.26
SDC2-202ENST00000518385 PLEKHG2Q9H7P9 1386 aa22.92■■□□□ 1.26
SDC2-202ENST00000518385 JCADQ9P266 1359 aa22.91■■□□□ 1.26
SDC2-202ENST00000518385 TATP17735 454 aaPredicted RBP22.91■■□□□ 1.26
SDC2-202ENST00000518385 ZBTB40Q9NUA8 1239 aa22.91■■□□□ 1.26
SDC2-202ENST00000518385 ABCC4O15439 1325 aa22.9■■□□□ 1.26
SDC2-202ENST00000518385 STRN4Q9NRL3 753 aa22.9■■□□□ 1.26
SDC2-202ENST00000518385 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP22.9■■□□□ 1.262e-6■■□□□ 11.9
SDC2-202ENST00000518385 ELL2O00472 640 aaPredicted RBP22.89■■□□□ 1.26
SDC2-202ENST00000518385 AKAP4Q5JQC9 854 aa22.89■■□□□ 1.26
SDC2-202ENST00000518385 LARP1Q6PKG0 1096 aaKnown RBP22.89■■□□□ 1.26
SDC2-202ENST00000518385 TSPYL4Q9UJ04 414 aa22.89■■□□□ 1.26
SDC2-202ENST00000518385 ZNF530Q6P9A1 599 aaPredicted RBP22.89■■□□□ 1.25
SDC2-202ENST00000518385 IL17REQ8NFR9 667 aa22.89■■□□□ 1.25
SDC2-202ENST00000518385 ANTXR1Q9H6X2 564 aa22.89■■□□□ 1.25
SDC2-202ENST00000518385 PTPRCP08575 1304 aa22.88■■□□□ 1.25
SDC2-202ENST00000518385 NUTM2BA6NNL0 878 aaPredicted RBP22.88■■□□□ 1.25
SDC2-202ENST00000518385 NUTM2EB1AL46 878 aaPredicted RBP22.88■■□□□ 1.25
SDC2-202ENST00000518385 ADAMTS2O95450 1211 aa22.88■■□□□ 1.25
SDC2-202ENST00000518385 NUTM2AQ8IVF1 878 aaPredicted RBP22.88■■□□□ 1.25
SDC2-202ENST00000518385 ANO8Q9HCE9 1232 aaPredicted RBP22.88■■□□□ 1.25
SDC2-202ENST00000518385 ISY1Q9ULR0 285 aaKnown RBP22.88■■□□□ 1.25
SDC2-202ENST00000518385 MEGF6O75095 1541 aa22.86■■□□□ 1.25
SDC2-202ENST00000518385 TAF7Q15545 349 aaPredicted RBP22.86■■□□□ 1.25
SDC2-202ENST00000518385 CHMP4AQ9BY43 222 aa22.86■■□□□ 1.25
SDC2-202ENST00000518385 SPG7Q9UQ90 795 aa22.86■■□□□ 1.25
SDC2-202ENST00000518385 C1orf141Q5JVX7 400 aa22.85■■□□□ 1.25
SDC2-202ENST00000518385 CEMIPQ8WUJ3 1361 aa22.84■■□□□ 1.25
SDC2-202ENST00000518385 ZBTB7BO15156 539 aaPredicted RBP22.84■■□□□ 1.25
SDC2-202ENST00000518385 RTN4Q9NQC3 1192 aaKnown RBP22.84■■□□□ 1.25
SDC2-202ENST00000518385 OVOS2A0A0G2JMS6 1433 aa22.83■■□□□ 1.25
SDC2-202ENST00000518385 HSPA1LP34931 641 aa22.83■■□□□ 1.25
SDC2-202ENST00000518385 PDZRN3Q9UPQ7 1066 aa22.83■■□□□ 1.25
SDC2-202ENST00000518385 SPATA31A6Q5VVP1 1343 aa22.82■■□□□ 1.24
SDC2-202ENST00000518385 LGR6Q9HBX8 967 aa22.82■■□□□ 1.24
SDC2-202ENST00000518385 EIF5BO60841 1220 aaKnown RBP22.81■■□□□ 1.24
SDC2-202ENST00000518385 IL2RBP14784 551 aa22.81■■□□□ 1.24
SDC2-202ENST00000518385 INTS3Q68E01 1043 aaKnown RBP22.81■■□□□ 1.24
SDC2-202ENST00000518385 PLCH1Q4KWH8 1693 aa22.81■■□□□ 1.24
SDC2-202ENST00000518385 PTMSP20962 102 aa22.8■■□□□ 1.24
SDC2-202ENST00000518385 PKD1L3Q7Z443 1732 aa22.8■■□□□ 1.24
SDC2-202ENST00000518385 RNMTO43148 476 aaKnown RBP22.8■■□□□ 1.24
SDC2-202ENST00000518385 SMC5Q8IY18 1101 aa22.8■■□□□ 1.24
SDC2-202ENST00000518385 PHKG2P15735 406 aa22.79■■□□□ 1.24
SDC2-202ENST00000518385 MPRIPQ6WCQ1 1025 aa22.79■■□□□ 1.24
SDC2-202ENST00000518385 IFNL2Q8IZJ0 200 aa22.79■■□□□ 1.24
SDC2-202ENST00000518385 CHMP5Q9NZZ3 219 aa22.79■■□□□ 1.24
SDC2-202ENST00000518385 PARP4Q9UKK3 1724 aaKnown RBP22.78■■□□□ 1.24
SDC2-202ENST00000518385 CACNA1FO60840 1977 aa22.78■■□□□ 1.24
SDC2-202ENST00000518385 CCDC30Q5VVM6 783 aa22.78■■□□□ 1.24
SDC2-202ENST00000518385 ZCRB1Q8TBF4 217 aaKnown RBP22.78■■□□□ 1.24
SDC2-202ENST00000518385 SLIT2O94813 1529 aa22.77■■□□□ 1.24
SDC2-202ENST00000518385 KRT24Q2M2I5 525 aa22.77■■□□□ 1.24
SDC2-202ENST00000518385 STK31Q9BXU1 1019 aa22.77■■□□□ 1.24
SDC2-202ENST00000518385 TBC1D2Q9BYX2 928 aa22.77■■□□□ 1.24
SDC2-202ENST00000518385 MIS18AQ9NYP9 233 aa22.77■■□□□ 1.24
SDC2-202ENST00000518385 CYP27B1O15528 508 aa22.76■■□□□ 1.23
SDC2-202ENST00000518385 SEC24BO95487 1268 aa22.76■■□□□ 1.23
SDC2-202ENST00000518385 HOXB7P09629 217 aa22.76■■□□□ 1.23
SDC2-202ENST00000518385 NWD2Q9ULI1 1742 aa22.76■■□□□ 1.23
SDC2-202ENST00000518385 SLC4A2P04920 1241 aa22.76■■□□□ 1.23
SDC2-202ENST00000518385 NRAPQ86VF7 1730 aa22.76■■□□□ 1.23
SDC2-202ENST00000518385 ADAMTS7Q9UKP4 1686 aa22.75■■□□□ 1.23
SDC2-202ENST00000518385 PRKCSHP14314 528 aaPredicted RBP22.75■■□□□ 1.23
SDC2-202ENST00000518385 RGS12O14924 1447 aa22.74■■□□□ 1.23
SDC2-202ENST00000518385 HSP90AB1P08238 724 aaKnown RBP22.74■■□□□ 1.23
SDC2-202ENST00000518385 TEFQ10587 303 aa22.74■■□□□ 1.23
SDC2-202ENST00000518385 GCC1Q96CN9 775 aa22.74■■□□□ 1.23
SDC2-202ENST00000518385 DDX11L8A8MPP1 907 aa22.73■■□□□ 1.23
SDC2-202ENST00000518385 NGLY1Q96IV0 654 aa22.73■■□□□ 1.23
SDC2-202ENST00000518385 PCDH11XQ9BZA7 1347 aa22.73■■□□□ 1.23
SDC2-202ENST00000518385 PCDH11YQ9BZA8 1340 aa22.73■■□□□ 1.23
SDC2-202ENST00000518385 FSD2A1L4K1 749 aa22.72■■□□□ 1.23
SDC2-202ENST00000518385 DCAF5Q96JK2 942 aa22.72■■□□□ 1.23
SDC2-202ENST00000518385 CIZ1Q9ULV3 898 aaPredicted RBP22.72■■□□□ 1.23
SDC2-202ENST00000518385 THRAP3Q9Y2W1 955 aaKnown RBP22.72■■□□□ 1.23
SDC2-202ENST00000518385 SPATA31A1Q5TZJ5 1347 aa22.72■■□□□ 1.23
SDC2-202ENST00000518385 DISP2A7MBM2 1401 aa22.72■■□□□ 1.23
SDC2-202ENST00000518385 GOLGA6L3A6NEY3 463 aa22.72■■□□□ 1.23
SDC2-202ENST00000518385 MCM4P33991 863 aa22.72■■□□□ 1.23
SDC2-202ENST00000518385 UNC5CLQ8IV45 518 aa22.72■■□□□ 1.23
SDC2-202ENST00000518385 FNBP4Q8N3X1 1017 aaPredicted RBP22.72■■□□□ 1.23
SDC2-202ENST00000518385 C8orf37Q96NL8 207 aa22.72■■□□□ 1.23
SDC2-202ENST00000518385 KDM6AO15550 1401 aaPredicted RBP22.71■■□□□ 1.23
SDC2-202ENST00000518385 LRP6O75581 1613 aa22.71■■□□□ 1.23
SDC2-202ENST00000518385 CCT4P50991 539 aaKnown RBP22.71■■□□□ 1.23
SDC2-202ENST00000518385 C22orf23Q9BZE7 217 aa22.71■■□□□ 1.23
SDC2-202ENST00000518385 KDM3BQ7LBC6 1761 aa22.7■■□□□ 1.22
SDC2-202ENST00000518385 SPATA31A5Q5VU36 1347 aa22.7■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms