RNA–Protein interactions for RNA: ENST00000517732.5

LINCR-0001-201, humanhuman

TSL 4 BASIC

Gene LINCR-0001, Length 562 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINCR-0001-201ENST00000517732 LINC00116Q8NCU8 138 aa12.63□□□□□ -0.39
LINCR-0001-201ENST00000517732 ZNF831Q5JPB2 1677 aa12.62□□□□□ -0.39
LINCR-0001-201ENST00000517732 PXDNLA1KZ92 1463 aa12.62□□□□□ -0.39
LINCR-0001-201ENST00000517732 MMP10P09238 476 aa12.62□□□□□ -0.39
LINCR-0001-201ENST00000517732 TGFB2P61812 414 aa12.62□□□□□ -0.39
LINCR-0001-201ENST00000517732 NKX1-1Q15270 411 aaPredicted RBP12.62□□□□□ -0.39
LINCR-0001-201ENST00000517732 AMIGO3Q86WK7 504 aa12.62□□□□□ -0.39
LINCR-0001-201ENST00000517732 BCS1LQ9Y276 419 aa12.62□□□□□ -0.39
LINCR-0001-201ENST00000517732 C4AP0C0L4 1744 aa12.62□□□□□ -0.39
LINCR-0001-201ENST00000517732 PPM1GO15355 546 aaPredicted RBP12.61□□□□□ -0.39
LINCR-0001-201ENST00000517732 SMIM5Q71RC9 77 aa12.61□□□□□ -0.39
LINCR-0001-201ENST00000517732 C16orf71Q8IYS4 520 aaPredicted RBP12.61□□□□□ -0.39
LINCR-0001-201ENST00000517732 CCDC87Q9NVE4 849 aa12.61□□□□□ -0.39
LINCR-0001-201ENST00000517732 COL5A3P25940 1745 aaPredicted RBP12.61□□□□□ -0.39
LINCR-0001-201ENST00000517732 NCAPD2Q15021 1401 aa12.61□□□□□ -0.39
LINCR-0001-201ENST00000517732 ARHGAP27Q6ZUM4 889 aa12.6□□□□□ -0.39
LINCR-0001-201ENST00000517732 IFNL2Q8IZJ0 200 aa12.6□□□□□ -0.39
LINCR-0001-201ENST00000517732 NLGN1Q8N2Q7 840 aa12.6□□□□□ -0.39
LINCR-0001-201ENST00000517732 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.6□□□□□ -0.39
LINCR-0001-201ENST00000517732 RTCBQ9Y3I0 505 aaKnown RBP12.6□□□□□ -0.39
LINCR-0001-201ENST00000517732 EMILIN1Q9Y6C2 1016 aa12.6□□□□□ -0.39
LINCR-0001-201ENST00000517732 PLEKHG2Q9H7P9 1386 aa12.59□□□□□ -0.39
LINCR-0001-201ENST00000517732 TRAPPC3LQ5T215 181 aa12.59□□□□□ -0.39
LINCR-0001-201ENST00000517732 C10orf71Q711Q0 1435 aa12.59□□□□□ -0.39
LINCR-0001-201ENST00000517732 TNRC6CQ9HCJ0 1690 aaKnown RBP12.58□□□□□ -0.4
LINCR-0001-201ENST00000517732 FCHSD2O94868 740 aa12.58□□□□□ -0.4
LINCR-0001-201ENST00000517732 ITPK1Q13572 414 aa12.58□□□□□ -0.4
LINCR-0001-201ENST00000517732 ASAP1Q9ULH1 1129 aa12.58□□□□□ -0.4
LINCR-0001-201ENST00000517732 PARP3Q9Y6F1 533 aa12.58□□□□□ -0.4
LINCR-0001-201ENST00000517732 A0A0G2JLW4 131 aa12.57□□□□□ -0.4
LINCR-0001-201ENST00000517732 PHKG2P15735 406 aa12.57□□□□□ -0.4
LINCR-0001-201ENST00000517732 KCNA4P22459 653 aa12.57□□□□□ -0.4
LINCR-0001-201ENST00000517732 RFC4P35249 363 aa12.57□□□□□ -0.4
LINCR-0001-201ENST00000517732 WASHC2AQ641Q2 1341 aa12.57□□□□□ -0.4
LINCR-0001-201ENST00000517732 SBF1O95248 1867 aa12.57□□□□□ -0.4
LINCR-0001-201ENST00000517732 RBM46Q8TBY0 533 aaKnown RBP12.56□□□□□ -0.4
LINCR-0001-201ENST00000517732 EYA1Q99502 592 aa12.56□□□□□ -0.4
LINCR-0001-201ENST00000517732 RBM42Q9BTD8 480 aaKnown RBP12.56□□□□□ -0.4
LINCR-0001-201ENST00000517732 NMRK2Q9NPI5 230 aa12.56□□□□□ -0.4
LINCR-0001-201ENST00000517732 ATG3Q9NT62 314 aa12.56□□□□□ -0.4
LINCR-0001-201ENST00000517732 KDM2BQ8NHM5 1336 aa12.56□□□□□ -0.4
LINCR-0001-201ENST00000517732 MYH14Q7Z406 1995 aaKnown RBP12.56□□□□□ -0.4
LINCR-0001-201ENST00000517732 KDRP35968 1356 aa12.56□□□□□ -0.4
LINCR-0001-201ENST00000517732 HSP90AB1P08238 724 aaKnown RBP12.55□□□□□ -0.4
LINCR-0001-201ENST00000517732 DPEP1P16444 411 aa12.55□□□□□ -0.4
LINCR-0001-201ENST00000517732 CNTNAP4Q9C0A0 1308 aa12.55□□□□□ -0.4
LINCR-0001-201ENST00000517732 FSTL1Q12841 308 aa12.54□□□□□ -0.4
LINCR-0001-201ENST00000517732 RC3H1Q5TC82 1133 aaKnown RBP12.54□□□□□ -0.4
LINCR-0001-201ENST00000517732 DNAJC5GQ8N7S2 189 aa12.54□□□□□ -0.4
LINCR-0001-201ENST00000517732 PIM2Q9P1W9 311 aa12.54□□□□□ -0.4
LINCR-0001-201ENST00000517732 ERVV-2B6SEH9 535 aa12.53□□□□□ -0.4
LINCR-0001-201ENST00000517732 RPS6KA4O75676 772 aa12.53□□□□□ -0.4
LINCR-0001-201ENST00000517732 C9orf131Q5VYM1 1079 aa12.53□□□□□ -0.4
LINCR-0001-201ENST00000517732 ARHGEF1Q92888 912 aaKnown RBP12.53□□□□□ -0.4
LINCR-0001-201ENST00000517732 CCDC88AQ3V6T2 1871 aa12.53□□□□□ -0.4
LINCR-0001-201ENST00000517732 GYS1P13807 737 aa12.52□□□□□ -0.41
LINCR-0001-201ENST00000517732 HOXD11P31277 338 aaPredicted RBP12.52□□□□□ -0.41
LINCR-0001-201ENST00000517732 KLRG1Q96E93 195 aa12.52□□□□□ -0.41
LINCR-0001-201ENST00000517732 KCPQ6ZWJ8 1503 aa12.52□□□□□ -0.41
LINCR-0001-201ENST00000517732 PLEKHO1Q53GL0 409 aaPredicted RBP12.51□□□□□ -0.41
LINCR-0001-201ENST00000517732 DALRD3Q5D0E6 543 aaKnown RBP12.51□□□□□ -0.41
LINCR-0001-201ENST00000517732 DCAF5Q96JK2 942 aa12.51□□□□□ -0.41
LINCR-0001-201ENST00000517732 CARD14Q9BXL6 1004 aa12.51□□□□□ -0.41
LINCR-0001-201ENST00000517732 RNF216Q9NWF9 866 aaPredicted RBP12.51□□□□□ -0.41
LINCR-0001-201ENST00000517732 RNF181Q9P0P0 153 aa12.51□□□□□ -0.41
LINCR-0001-201ENST00000517732 VIRMAQ69YN4 1812 aaKnown RBP12.51□□□□□ -0.41
LINCR-0001-201ENST00000517732 CABP4P57796 275 aa12.5□□□□□ -0.41
LINCR-0001-201ENST00000517732 POLKQ9UBT6 870 aa12.5□□□□□ -0.41
LINCR-0001-201ENST00000517732 TJP1Q07157 1748 aa12.5□□□□□ -0.41
LINCR-0001-201ENST00000517732 AFDNP55196 1824 aaKnown RBP12.49□□□□□ -0.41
LINCR-0001-201ENST00000517732 SCN11AQ9UI33 1791 aa12.49□□□□□ -0.41
LINCR-0001-201ENST00000517732 NPM3O75607 178 aaKnown RBP12.49□□□□□ -0.41
LINCR-0001-201ENST00000517732 EIF4A2Q14240 407 aaKnown RBP12.49□□□□□ -0.41
LINCR-0001-201ENST00000517732 C1orf141Q5JVX7 400 aa12.49□□□□□ -0.41
LINCR-0001-201ENST00000517732 JMYQ8N9B5 988 aa12.49□□□□□ -0.41
LINCR-0001-201ENST00000517732 SMC1BQ8NDV3 1235 aa12.49□□□□□ -0.41
LINCR-0001-201ENST00000517732 DLEC1Q9Y238 1755 aa12.48□□□□□ -0.41
LINCR-0001-201ENST00000517732 TIAM2Q8IVF5 1701 aa12.48□□□□□ -0.41
LINCR-0001-201ENST00000517732 AMOTQ4VCS5 1084 aa12.48□□□□□ -0.41
LINCR-0001-201ENST00000517732 ZNF530Q6P9A1 599 aaPredicted RBP12.48□□□□□ -0.41
LINCR-0001-201ENST00000517732 SLC4A9Q96Q91 983 aa12.48□□□□□ -0.41
LINCR-0001-201ENST00000517732 RRAGCQ9HB90 399 aa12.48□□□□□ -0.41
LINCR-0001-201ENST00000517732 USP42Q9H9J4 1324 aaKnown RBP12.47□□□□□ -0.41
LINCR-0001-201ENST00000517732 ZC3H4Q9UPT8 1303 aaKnown RBP12.47□□□□□ -0.41
LINCR-0001-201ENST00000517732 TNNT2P45379 298 aaPredicted RBP12.47□□□□□ -0.41
LINCR-0001-201ENST00000517732 CRKLP46109 303 aaKnown RBP12.47□□□□□ -0.41
LINCR-0001-201ENST00000517732 HTRA3P83110 453 aa12.47□□□□□ -0.41
LINCR-0001-201ENST00000517732 TNS4Q8IZW8 715 aa12.47□□□□□ -0.41
LINCR-0001-201ENST00000517732 KDM6AO15550 1401 aaPredicted RBP12.46□□□□□ -0.41
LINCR-0001-201ENST00000517732 PTCD1O75127 700 aaKnown RBP12.46□□□□□ -0.41
LINCR-0001-201ENST00000517732 CAPN15O75808 1086 aa12.46□□□□□ -0.41
LINCR-0001-201ENST00000517732 KCNA3P22001 575 aa12.46□□□□□ -0.41
LINCR-0001-201ENST00000517732 MTHFSP49914 203 aa12.46□□□□□ -0.41
LINCR-0001-201ENST00000517732 COL13A1Q5TAT6 717 aaPredicted RBP12.46□□□□□ -0.41
LINCR-0001-201ENST00000517732 POLR3GLQ9BT43 218 aa12.46□□□□□ -0.41
LINCR-0001-201ENST00000517732 ZPR1O75312 459 aa12.45□□□□□ -0.42
LINCR-0001-201ENST00000517732 FKBP8Q14318 412 aa12.45□□□□□ -0.42
LINCR-0001-201ENST00000517732 SRP68Q9UHB9 627 aaKnown RBP12.45□□□□□ -0.42
LINCR-0001-201ENST00000517732 CHRNA5P30532 468 aa12.44□□□□□ -0.42
LINCR-0001-201ENST00000517732 DDR1Q08345 913 aa12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms