RNA–Protein interactions for RNA: ENST00000517709.1

MCM4-202, Transcript of minichromosome maintenance complex component 4, humanhuman

TSL 2

Gene MCM4, Length 842 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCM4-202ENST00000517709 DIAPH1O60610 1272 aaKnown RBP16.07■□□□□ 0.16
MCM4-202ENST00000517709 PLEKHO1Q53GL0 409 aaPredicted RBP16.07■□□□□ 0.16
MCM4-202ENST00000517709 COL23A1Q86Y22 540 aaPredicted RBP16.07■□□□□ 0.16
MCM4-202ENST00000517709 TFCP2L1Q9NZI6 479 aa16.07■□□□□ 0.16
MCM4-202ENST00000517709 PPP1R1BQ9UD71 204 aaPredicted RBP16.07■□□□□ 0.16
MCM4-202ENST00000517709 LOC102724428A0A0B4J2F2 783 aa16.06■□□□□ 0.16
MCM4-202ENST00000517709 SIK1P57059 783 aa16.06■□□□□ 0.16
MCM4-202ENST00000517709 KIAA1551Q9HCM1 1747 aa16.05■□□□□ 0.16
MCM4-202ENST00000517709 PPP2R1AP30153 589 aa16.05■□□□□ 0.16
MCM4-202ENST00000517709 AMOTQ4VCS5 1084 aa16.05■□□□□ 0.16
MCM4-202ENST00000517709 DCAF5Q96JK2 942 aa16.05■□□□□ 0.16
MCM4-202ENST00000517709 MTHFSDQ2M296 383 aaKnown RBP16.04■□□□□ 0.16
MCM4-202ENST00000517709 MSL1Q68DK7 614 aa16.04■□□□□ 0.16
MCM4-202ENST00000517709 SMARCC1Q92922 1105 aaPredicted RBP16.04■□□□□ 0.16
MCM4-202ENST00000517709 FHDC1Q9C0D6 1143 aaPredicted RBP16.04■□□□□ 0.16
MCM4-202ENST00000517709 ERVV-2B6SEH9 535 aa16.03■□□□□ 0.16
MCM4-202ENST00000517709 LGR6Q9HBX8 967 aa16.03■□□□□ 0.16
MCM4-202ENST00000517709 C1orf141Q5JVX7 400 aa16.02■□□□□ 0.16
MCM4-202ENST00000517709 KIF13BQ9NQT8 1826 aa16.02■□□□□ 0.16
MCM4-202ENST00000517709 U2SURPO15042 1029 aaKnown RBP16.01■□□□□ 0.15
MCM4-202ENST00000517709 PHF14O94880 888 aa16.01■□□□□ 0.15
MCM4-202ENST00000517709 HSP90AB1P08238 724 aaKnown RBP16.01■□□□□ 0.15
MCM4-202ENST00000517709 MAP3K5Q99683 1374 aa16■□□□□ 0.15
MCM4-202ENST00000517709 CHD4Q14839 1912 aa16■□□□□ 0.15
MCM4-202ENST00000517709 ATP6V1AP38606 617 aa16■□□□□ 0.15
MCM4-202ENST00000517709 CABP4P57796 275 aa16■□□□□ 0.15
MCM4-202ENST00000517709 AKAP4Q5JQC9 854 aa16■□□□□ 0.15
MCM4-202ENST00000517709 AK7Q96M32 723 aa16■□□□□ 0.15
MCM4-202ENST00000517709 ARXQ96QS3 562 aa16■□□□□ 0.15
MCM4-202ENST00000517709 RSPH6AQ9H0K4 717 aa16■□□□□ 0.15
MCM4-202ENST00000517709 RNMTO43148 476 aaKnown RBP15.99■□□□□ 0.15
MCM4-202ENST00000517709 NFATC2IPQ8NCF5 419 aa15.99■□□□□ 0.15
MCM4-202ENST00000517709 N4BP2Q86UW6 1770 aaPredicted RBP15.98■□□□□ 0.15
MCM4-202ENST00000517709 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP15.98■□□□□ 0.15
MCM4-202ENST00000517709 GNPATO15228 680 aa15.98■□□□□ 0.15
MCM4-202ENST00000517709 MSH5O43196 834 aa15.98■□□□□ 0.15
MCM4-202ENST00000517709 SLC16A10Q8TF71 515 aa15.98■□□□□ 0.15
MCM4-202ENST00000517709 PHACTR3Q96KR7 559 aa15.98■□□□□ 0.15
MCM4-202ENST00000517709 SYT17Q9BSW7 474 aa15.98■□□□□ 0.15
MCM4-202ENST00000517709 RBM42Q9BTD8 480 aaKnown RBP15.98■□□□□ 0.15
MCM4-202ENST00000517709 KDM3BQ7LBC6 1761 aa15.98■□□□□ 0.15
MCM4-202ENST00000517709 BRCA1P38398 1863 aaKnown RBP15.97■□□□□ 0.15
MCM4-202ENST00000517709 NLGN2Q8NFZ4 835 aa15.97■□□□□ 0.15
MCM4-202ENST00000517709 SLC52A2Q9HAB3 445 aa15.97■□□□□ 0.15
MCM4-202ENST00000517709 SCN7AQ01118 1682 aa15.97■□□□□ 0.15
MCM4-202ENST00000517709 PTCD1O75127 700 aaKnown RBP15.96■□□□□ 0.15
MCM4-202ENST00000517709 PRKAR2BP31323 418 aa15.96■□□□□ 0.15
MCM4-202ENST00000517709 SLC39A6Q13433 755 aa15.96■□□□□ 0.15
MCM4-202ENST00000517709 LAMB4A4D0S4 1761 aa15.95■□□□□ 0.14
MCM4-202ENST00000517709 KLHL34Q8N239 644 aa15.95■□□□□ 0.14
MCM4-202ENST00000517709 AFDNP55196 1824 aaKnown RBP15.95■□□□□ 0.14
MCM4-202ENST00000517709 BCORQ6W2J9 1755 aa15.95■□□□□ 0.14
MCM4-202ENST00000517709 CNTNAP4Q9C0A0 1308 aa15.94■□□□□ 0.14
MCM4-202ENST00000517709 SSFA2P28290 1259 aa15.94■□□□□ 0.14
MCM4-202ENST00000517709 CEMIPQ8WUJ3 1361 aa15.94■□□□□ 0.14
MCM4-202ENST00000517709 CFAP53Q96M91 514 aa15.93■□□□□ 0.14
MCM4-202ENST00000517709 POLD1P28340 1107 aa15.92■□□□□ 0.14
MCM4-202ENST00000517709 DNAJC10Q8IXB1 793 aa15.92■□□□□ 0.14
MCM4-202ENST00000517709 IL17REQ8NFR9 667 aa15.92■□□□□ 0.14
MCM4-202ENST00000517709 U2AF1L5P0DN76 240 aaPredicted RBP15.91■□□□□ 0.14
MCM4-202ENST00000517709 CRKLP46109 303 aaKnown RBP15.91■□□□□ 0.14
MCM4-202ENST00000517709 U2AF1Q01081 240 aaKnown RBP eCLIP15.91■□□□□ 0.14
MCM4-202ENST00000517709 DDX10Q13206 875 aaKnown RBP15.91■□□□□ 0.14
MCM4-202ENST00000517709 NRXN2Q9P2S2 1712 aa15.91■□□□□ 0.14
MCM4-202ENST00000517709 GAS2L2Q8NHY3 880 aa15.9■□□□□ 0.14
MCM4-202ENST00000517709 GNAT3A8MTJ3 354 aa15.89■□□□□ 0.13
MCM4-202ENST00000517709 INTS5Q6P9B9 1019 aaKnown RBP15.89■□□□□ 0.13
MCM4-202ENST00000517709 FLAD1Q8NFF5 587 aa15.89■□□□□ 0.13
MCM4-202ENST00000517709 KCNQ3O43525 872 aa15.88■□□□□ 0.13
MCM4-202ENST00000517709 RC3H1Q5TC82 1133 aaKnown RBP15.88■□□□□ 0.13
MCM4-202ENST00000517709 ARHGEF1Q92888 912 aaKnown RBP15.88■□□□□ 0.13
MCM4-202ENST00000517709 SRP68Q9UHB9 627 aaKnown RBP15.88■□□□□ 0.13
MCM4-202ENST00000517709 DLEC1Q9Y238 1755 aa15.87■□□□□ 0.13
MCM4-202ENST00000517709 C10orf71Q711Q0 1435 aa15.87■□□□□ 0.13
MCM4-202ENST00000517709 DCTN1Q14203 1278 aa15.87■□□□□ 0.13
MCM4-202ENST00000517709 RTCBQ9Y3I0 505 aaKnown RBP15.87■□□□□ 0.13
MCM4-202ENST00000517709 SOS1Q07889 1333 aaPredicted RBP15.87■□□□□ 0.13
MCM4-202ENST00000517709 ANKRD31Q8N7Z5 1873 aa15.86■□□□□ 0.13
MCM4-202ENST00000517709 PXDNLA1KZ92 1463 aa15.86■□□□□ 0.13
MCM4-202ENST00000517709 RPS6KA4O75676 772 aa15.86■□□□□ 0.13
MCM4-202ENST00000517709 CYP19A1P11511 503 aaPredicted RBP15.86■□□□□ 0.13
MCM4-202ENST00000517709 GYS1P13807 737 aa15.86■□□□□ 0.13
MCM4-202ENST00000517709 YBX3P16989 372 aaKnown RBP eCLIP15.86■□□□□ 0.132e-8■□□□□ 8.8
MCM4-202ENST00000517709 MCM10Q7L590 875 aa15.86■□□□□ 0.13
MCM4-202ENST00000517709 PLEKHF1Q96S99 279 aa15.86■□□□□ 0.13
MCM4-202ENST00000517709 NUDCQ9Y266 331 aa15.86■□□□□ 0.13
MCM4-202ENST00000517709 ZBTB1Q9Y2K1 713 aa15.86■□□□□ 0.13
MCM4-202ENST00000517709 COL11A2P13942 1736 aaPredicted RBP15.85■□□□□ 0.13
MCM4-202ENST00000517709 MMP10P09238 476 aa15.85■□□□□ 0.13
MCM4-202ENST00000517709 ZNF496Q96IT1 587 aaPredicted RBP15.85■□□□□ 0.13
MCM4-202ENST00000517709 USP42Q9H9J4 1324 aaKnown RBP15.85■□□□□ 0.13
MCM4-202ENST00000517709 COL15A1P39059 1388 aa15.85■□□□□ 0.13
MCM4-202ENST00000517709 HEG1Q9ULI3 1381 aa15.85■□□□□ 0.13
MCM4-202ENST00000517709 FCHSD2O94868 740 aa15.84■□□□□ 0.13
MCM4-202ENST00000517709 CCDC87Q9NVE4 849 aa15.84■□□□□ 0.13
MCM4-202ENST00000517709 WWC3Q9ULE0 1092 aa15.84■□□□□ 0.13
MCM4-202ENST00000517709 ARFGEF1Q9Y6D6 1849 aa15.84■□□□□ 0.13
MCM4-202ENST00000517709 PRAMEF22A3QJZ6 481 aa15.83■□□□□ 0.12
MCM4-202ENST00000517709 ADRA2BP18089 450 aa15.83■□□□□ 0.12
MCM4-202ENST00000517709 TRAPPC3LQ5T215 181 aa15.83■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 66.8 ms