RNA–Protein interactions for RNA: ENST00000517660.1

PDGFRB-203, Transcript of platelet derived growth factor receptor beta, humanhuman

TSL 3

Gene PDGFRB, Length 611 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRB-203ENST00000517660 MORC1Q86VD1 984 aa14.47□□□□□ -0.09
PDGFRB-203ENST00000517660 FLAD1Q8NFF5 587 aa14.47□□□□□ -0.09
PDGFRB-203ENST00000517660 UBR3Q6ZT12 1888 aa14.46□□□□□ -0.09
PDGFRB-203ENST00000517660 PCDH11XQ9BZA7 1347 aa14.46□□□□□ -0.09
PDGFRB-203ENST00000517660 PCDH11YQ9BZA8 1340 aa14.46□□□□□ -0.09
PDGFRB-203ENST00000517660 KIF13BQ9NQT8 1826 aa14.46□□□□□ -0.09
PDGFRB-203ENST00000517660 KIF7Q2M1P5 1343 aa14.45□□□□□ -0.1
PDGFRB-203ENST00000517660 N4BP2Q86UW6 1770 aaPredicted RBP14.45□□□□□ -0.1
PDGFRB-203ENST00000517660 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP14.45□□□□□ -0.1
PDGFRB-203ENST00000517660 PHF14O94880 888 aa14.45□□□□□ -0.1
PDGFRB-203ENST00000517660 EIF4A2Q14240 407 aaKnown RBP14.45□□□□□ -0.1
PDGFRB-203ENST00000517660 C9orf131Q5VYM1 1079 aa14.45□□□□□ -0.1
PDGFRB-203ENST00000517660 PCDH10Q9P2E7 1040 aa14.45□□□□□ -0.1
PDGFRB-203ENST00000517660 SPG7Q9UQ90 795 aa14.45□□□□□ -0.1
PDGFRB-203ENST00000517660 BCS1LQ9Y276 419 aa14.45□□□□□ -0.1
PDGFRB-203ENST00000517660 KIF20BQ96Q89 1820 aa14.45□□□□□ -0.1
PDGFRB-203ENST00000517660 PALLDQ8WX93 1383 aa14.45□□□□□ -0.1
PDGFRB-203ENST00000517660 A0A0G2JLW4 131 aa14.44□□□□□ -0.1
PDGFRB-203ENST00000517660 CYP27B1O15528 508 aa14.44□□□□□ -0.1
PDGFRB-203ENST00000517660 ARHGAP27Q6ZUM4 889 aa14.44□□□□□ -0.1
PDGFRB-203ENST00000517660 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP14.44□□□□□ -0.1
PDGFRB-203ENST00000517660 PKD1L3Q7Z443 1732 aa14.44□□□□□ -0.1
PDGFRB-203ENST00000517660 C16orf71Q8IYS4 520 aaPredicted RBP14.43□□□□□ -0.1
PDGFRB-203ENST00000517660 RRAGCQ9HB90 399 aa14.43□□□□□ -0.1
PDGFRB-203ENST00000517660 NCAPD2Q15021 1401 aa14.42□□□□□ -0.1
PDGFRB-203ENST00000517660 NKX1-1Q15270 411 aaPredicted RBP14.42□□□□□ -0.1
PDGFRB-203ENST00000517660 PLEKHG2Q9H7P9 1386 aa14.42□□□□□ -0.1
PDGFRB-203ENST00000517660 KCNA3P22001 575 aa14.41□□□□□ -0.1
PDGFRB-203ENST00000517660 AMER1Q5JTC6 1135 aaPredicted RBP14.41□□□□□ -0.1
PDGFRB-203ENST00000517660 AK7Q96M32 723 aa14.41□□□□□ -0.1
PDGFRB-203ENST00000517660 BRCA1P38398 1863 aaKnown RBP14.41□□□□□ -0.1
PDGFRB-203ENST00000517660 RGPD2P0DJD1 1756 aa14.4□□□□□ -0.1
PDGFRB-203ENST00000517660 TNRC6CQ9HCJ0 1690 aaKnown RBP14.4□□□□□ -0.1
PDGFRB-203ENST00000517660 MMP10P09238 476 aa14.4□□□□□ -0.1
PDGFRB-203ENST00000517660 HMGB2P26583 209 aaKnown RBP14.4□□□□□ -0.1
PDGFRB-203ENST00000517660 TGFB2P61812 414 aa14.4□□□□□ -0.1
PDGFRB-203ENST00000517660 MPRIPQ6WCQ1 1025 aa14.4□□□□□ -0.1
PDGFRB-203ENST00000517660 SMC1BQ8NDV3 1235 aa14.4□□□□□ -0.1
PDGFRB-203ENST00000517660 PER1O15534 1290 aaPredicted RBP14.39□□□□□ -0.11
PDGFRB-203ENST00000517660 DPEP1P16444 411 aa14.39□□□□□ -0.11
PDGFRB-203ENST00000517660 SSFA2P28290 1259 aa14.39□□□□□ -0.11
PDGFRB-203ENST00000517660 IFNL2Q8IZJ0 200 aa14.39□□□□□ -0.11
PDGFRB-203ENST00000517660 LINC00116Q8NCU8 138 aa14.39□□□□□ -0.11
PDGFRB-203ENST00000517660 MAP2P11137 1827 aaKnown RBP14.38□□□□□ -0.11
PDGFRB-203ENST00000517660 FAM161AQ3B820 660 aa14.38□□□□□ -0.11
PDGFRB-203ENST00000517660 SMARCC1Q92922 1105 aaPredicted RBP14.38□□□□□ -0.11
PDGFRB-203ENST00000517660 FOXN1O15353 648 aa14.37□□□□□ -0.11
PDGFRB-203ENST00000517660 FCHSD2O94868 740 aa14.37□□□□□ -0.11
PDGFRB-203ENST00000517660 PHKG2P15735 406 aa14.37□□□□□ -0.11
PDGFRB-203ENST00000517660 PLEKHO1Q53GL0 409 aaPredicted RBP14.37□□□□□ -0.11
PDGFRB-203ENST00000517660 PIGBQ92521 554 aa14.37□□□□□ -0.11
PDGFRB-203ENST00000517660 KDM2BQ8NHM5 1336 aa14.37□□□□□ -0.11
PDGFRB-203ENST00000517660 IL13P35225 146 aa14.35□□□□□ -0.11
PDGFRB-203ENST00000517660 AMOTQ4VCS5 1084 aa14.35□□□□□ -0.11
PDGFRB-203ENST00000517660 DCAF5Q96JK2 942 aa14.35□□□□□ -0.11
PDGFRB-203ENST00000517660 RNF181Q9P0P0 153 aa14.35□□□□□ -0.11
PDGFRB-203ENST00000517660 ARFGEF1Q9Y6D6 1849 aa14.34□□□□□ -0.11
PDGFRB-203ENST00000517660 HSP90AB1P08238 724 aaKnown RBP14.34□□□□□ -0.11
PDGFRB-203ENST00000517660 MTHFSP49914 203 aa14.34□□□□□ -0.11
PDGFRB-203ENST00000517660 ITPK1Q13572 414 aa14.34□□□□□ -0.11
PDGFRB-203ENST00000517660 CC2D1BQ5T0F9 858 aaKnown RBP14.34□□□□□ -0.11
PDGFRB-203ENST00000517660 TMOD3Q9NYL9 352 aa14.34□□□□□ -0.11
PDGFRB-203ENST00000517660 ANKRD26Q9UPS8 1709 aa14.34□□□□□ -0.11
PDGFRB-203ENST00000517660 SULT6B1Q6IMI4 303 aa14.33□□□□□ -0.12
PDGFRB-203ENST00000517660 C4AP0C0L4 1744 aa14.32□□□□□ -0.12
PDGFRB-203ENST00000517660 ERVV-2B6SEH9 535 aa14.32□□□□□ -0.12
PDGFRB-203ENST00000517660 GNPATO15228 680 aa14.32□□□□□ -0.12
PDGFRB-203ENST00000517660 ZNF530Q6P9A1 599 aaPredicted RBP14.32□□□□□ -0.12
PDGFRB-203ENST00000517660 AEBP1Q8IUX7 1158 aa14.32□□□□□ -0.12
PDGFRB-203ENST00000517660 PRDM10Q9NQV6 1147 aa14.32□□□□□ -0.12
PDGFRB-203ENST00000517660 KDM6AO15550 1401 aaPredicted RBP14.32□□□□□ -0.12
PDGFRB-203ENST00000517660 ASAP1Q9ULH1 1129 aa14.31□□□□□ -0.12
PDGFRB-203ENST00000517660 ITGB4P16144 1822 aa14.31□□□□□ -0.12
PDGFRB-203ENST00000517660 NPC1L1Q9UHC9 1359 aa14.31□□□□□ -0.12
PDGFRB-203ENST00000517660 LOC102724428A0A0B4J2F2 783 aa14.3□□□□□ -0.12
PDGFRB-203ENST00000517660 POTECB2RU33 542 aa14.3□□□□□ -0.12
PDGFRB-203ENST00000517660 SIK1P57059 783 aa14.3□□□□□ -0.12
PDGFRB-203ENST00000517660 C1orf141Q5JVX7 400 aa14.3□□□□□ -0.12
PDGFRB-203ENST00000517660 ATG3Q9NT62 314 aa14.3□□□□□ -0.12
PDGFRB-203ENST00000517660 SBF1O95248 1867 aa14.29□□□□□ -0.12
PDGFRB-203ENST00000517660 MKRN1Q9UHC7 482 aaKnown RBP14.29□□□□□ -0.12
PDGFRB-203ENST00000517660 DIAPH1O60610 1272 aaKnown RBP14.28□□□□□ -0.12
PDGFRB-203ENST00000517660 KDRP35968 1356 aa14.28□□□□□ -0.12
PDGFRB-203ENST00000517660 CABP4P57796 275 aa14.28□□□□□ -0.12
PDGFRB-203ENST00000517660 RASSF7Q02833 373 aa14.28□□□□□ -0.12
PDGFRB-203ENST00000517660 CNGB1Q14028 1251 aaPredicted RBP14.28□□□□□ -0.12
PDGFRB-203ENST00000517660 GYS1P13807 737 aa14.27□□□□□ -0.13
PDGFRB-203ENST00000517660 ATP6V1AP38606 617 aa14.27□□□□□ -0.13
PDGFRB-203ENST00000517660 ABHD8Q96I13 439 aa14.27□□□□□ -0.13
PDGFRB-203ENST00000517660 CCDC87Q9NVE4 849 aa14.27□□□□□ -0.13
PDGFRB-203ENST00000517660 PIM2Q9P1W9 311 aa14.27□□□□□ -0.13
PDGFRB-203ENST00000517660 GLTPD2A6NH11 291 aa14.26□□□□□ -0.13
PDGFRB-203ENST00000517660 VEGFAP15692 232 aaPredicted RBP14.26□□□□□ -0.13
PDGFRB-203ENST00000517660 SLC4A9Q96Q91 983 aa14.26□□□□□ -0.13
PDGFRB-203ENST00000517660 HMOX1P09601 288 aa14.25□□□□□ -0.13
PDGFRB-203ENST00000517660 CHRNA5P30532 468 aa14.25□□□□□ -0.13
PDGFRB-203ENST00000517660 DALRD3Q5D0E6 543 aaKnown RBP14.25□□□□□ -0.13
PDGFRB-203ENST00000517660 AKAP4Q5JQC9 854 aa14.25□□□□□ -0.13
PDGFRB-203ENST00000517660 NLGN1Q8N2Q7 840 aa14.25□□□□□ -0.13
PDGFRB-203ENST00000517660 CREBZFQ9NS37 354 aa14.25□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms