RNA–Protein interactions for RNA: ENST00000517386.1

HMBOX1-204, Transcript of homeobox containing 1, humanhuman

TSL 4

Gene HMBOX1, Length 761 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMBOX1-204ENST00000517386 SENP3-EIF4A1A0A087X0R7 540 aa10.97□□□□□ -0.65
HMBOX1-204ENST00000517386 PPM1GO15355 546 aaPredicted RBP10.97□□□□□ -0.65
HMBOX1-204ENST00000517386 MPRIPQ6WCQ1 1025 aa10.97□□□□□ -0.65
HMBOX1-204ENST00000517386 COL23A1Q86Y22 540 aaPredicted RBP10.97□□□□□ -0.65
HMBOX1-204ENST00000517386 FAM208AQ9UK61 1670 aaKnown RBP10.97□□□□□ -0.65
HMBOX1-204ENST00000517386 TUBGCP6Q96RT7 1819 aa10.96□□□□□ -0.65
HMBOX1-204ENST00000517386 USP47Q96K76 1375 aa10.96□□□□□ -0.65
HMBOX1-204ENST00000517386 TATP17735 454 aaPredicted RBP10.96□□□□□ -0.65
HMBOX1-204ENST00000517386 TMF1P82094 1093 aa10.96□□□□□ -0.65
HMBOX1-204ENST00000517386 POLR3GLQ9BT43 218 aa10.96□□□□□ -0.65
HMBOX1-204ENST00000517386 EMILIN1Q9Y6C2 1016 aa10.96□□□□□ -0.65
HMBOX1-204ENST00000517386 SLC16A10Q8TF71 515 aa10.95□□□□□ -0.66
HMBOX1-204ENST00000517386 SHANK3Q9BYB0 1731 aa10.95□□□□□ -0.66
HMBOX1-204ENST00000517386 POTEFA5A3E0 1075 aa10.94□□□□□ -0.66
HMBOX1-204ENST00000517386 PHF14O94880 888 aa10.94□□□□□ -0.66
HMBOX1-204ENST00000517386 YBX3P16989 372 aaKnown RBP eCLIP10.94□□□□□ -0.66
HMBOX1-204ENST00000517386 CARD14Q9BXL6 1004 aa10.94□□□□□ -0.66
HMBOX1-204ENST00000517386 SMG6Q86US8 1419 aaKnown RBP10.93□□□□□ -0.66
HMBOX1-204ENST00000517386 RTL1A6NKG5 1358 aa10.93□□□□□ -0.66
HMBOX1-204ENST00000517386 MAP3K5Q99683 1374 aa10.93□□□□□ -0.66
HMBOX1-204ENST00000517386 CYP27B1O15528 508 aa10.93□□□□□ -0.66
HMBOX1-204ENST00000517386 TNNT2P45379 298 aaPredicted RBP10.93□□□□□ -0.66
HMBOX1-204ENST00000517386 AMIGO3Q86WK7 504 aa10.93□□□□□ -0.66
HMBOX1-204ENST00000517386 CHD4Q14839 1912 aa10.92□□□□□ -0.66
HMBOX1-204ENST00000517386 ATN1P54259 1190 aaPredicted RBP10.92□□□□□ -0.66
HMBOX1-204ENST00000517386 C1QTNF8P60827 252 aa10.92□□□□□ -0.66
HMBOX1-204ENST00000517386 NSD3Q9BZ95 1437 aa10.92□□□□□ -0.66
HMBOX1-204ENST00000517386 INSRP06213 1382 aa10.91□□□□□ -0.66
HMBOX1-204ENST00000517386 PALLDQ8WX93 1383 aa10.91□□□□□ -0.66
HMBOX1-204ENST00000517386 PCDH11XQ9BZA7 1347 aa10.91□□□□□ -0.66
HMBOX1-204ENST00000517386 PCDH11YQ9BZA8 1340 aa10.91□□□□□ -0.66
HMBOX1-204ENST00000517386 LY75O60449 1722 aa10.91□□□□□ -0.66
HMBOX1-204ENST00000517386 FLT4P35916 1363 aa10.9□□□□□ -0.66
HMBOX1-204ENST00000517386 GIGYF1O75420 1035 aaPredicted RBP10.9□□□□□ -0.66
HMBOX1-204ENST00000517386 ZNF526Q8TF50 670 aaPredicted RBP10.9□□□□□ -0.66
HMBOX1-204ENST00000517386 PIGBQ92521 554 aa10.9□□□□□ -0.66
HMBOX1-204ENST00000517386 AK7Q96M32 723 aa10.9□□□□□ -0.66
HMBOX1-204ENST00000517386 CGNL1Q0VF96 1302 aa10.89□□□□□ -0.67
HMBOX1-204ENST00000517386 SLC24A1O60721 1099 aa10.89□□□□□ -0.67
HMBOX1-204ENST00000517386 QSER1Q2KHR3 1735 aa10.89□□□□□ -0.67
HMBOX1-204ENST00000517386 EYA1Q99502 592 aa10.88□□□□□ -0.67
HMBOX1-204ENST00000517386 PCGF6Q9BYE7 350 aa10.88□□□□□ -0.67
HMBOX1-204ENST00000517386 ASAP1Q9ULH1 1129 aa10.88□□□□□ -0.67
HMBOX1-204ENST00000517386 KIF20BQ96Q89 1820 aa10.88□□□□□ -0.67
HMBOX1-204ENST00000517386 TOGARAM1Q9Y4F4 1720 aa10.87□□□□□ -0.67
HMBOX1-204ENST00000517386 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP10.87□□□□□ -0.67
HMBOX1-204ENST00000517386 ST18O60284 1047 aa10.87□□□□□ -0.67
HMBOX1-204ENST00000517386 TRIM26Q12899 539 aaPredicted RBP10.87□□□□□ -0.67
HMBOX1-204ENST00000517386 CDCA8Q53HL2 280 aa10.87□□□□□ -0.67
HMBOX1-204ENST00000517386 LINC00116Q8NCU8 138 aa10.87□□□□□ -0.67
HMBOX1-204ENST00000517386 C5P01031 1676 aa10.87□□□□□ -0.67
HMBOX1-204ENST00000517386 GRIN3BO60391 1043 aa10.86□□□□□ -0.67
HMBOX1-204ENST00000517386 ITPK1Q13572 414 aa10.86□□□□□ -0.67
HMBOX1-204ENST00000517386 SMARCC1Q92922 1105 aaPredicted RBP10.86□□□□□ -0.67
HMBOX1-204ENST00000517386 TMOD3Q9NYL9 352 aa10.86□□□□□ -0.67
HMBOX1-204ENST00000517386 SPG7Q9UQ90 795 aa10.86□□□□□ -0.67
HMBOX1-204ENST00000517386 COL24A1Q17RW2 1714 aa10.86□□□□□ -0.67
HMBOX1-204ENST00000517386 LOC102724428A0A0B4J2F2 783 aa10.85□□□□□ -0.67
HMBOX1-204ENST00000517386 GNPATO15228 680 aa10.85□□□□□ -0.67
HMBOX1-204ENST00000517386 SIK1P57059 783 aa10.85□□□□□ -0.67
HMBOX1-204ENST00000517386 POLKQ9UBT6 870 aa10.85□□□□□ -0.67
HMBOX1-204ENST00000517386 IGSF1Q8N6C5 1336 aa10.84□□□□□ -0.67
HMBOX1-204ENST00000517386 ATP10DQ9P241 1426 aa10.84□□□□□ -0.67
HMBOX1-204ENST00000517386 C4BP0C0L5 1744 aa10.84□□□□□ -0.67
HMBOX1-204ENST00000517386 ITGB4P16144 1822 aa10.84□□□□□ -0.67
HMBOX1-204ENST00000517386 ATP6V1AP38606 617 aa10.84□□□□□ -0.67
HMBOX1-204ENST00000517386 EIF4A2Q14240 407 aaKnown RBP10.84□□□□□ -0.67
HMBOX1-204ENST00000517386 FLAD1Q8NFF5 587 aa10.84□□□□□ -0.67
HMBOX1-204ENST00000517386 CD2APQ9Y5K6 639 aa10.84□□□□□ -0.67
HMBOX1-204ENST00000517386 WASHC2AQ641Q2 1341 aa10.84□□□□□ -0.67
HMBOX1-204ENST00000517386 PHKG2P15735 406 aa10.83□□□□□ -0.68
HMBOX1-204ENST00000517386 NKX1-1Q15270 411 aaPredicted RBP10.83□□□□□ -0.68
HMBOX1-204ENST00000517386 ATG3Q9NT62 314 aa10.83□□□□□ -0.68
HMBOX1-204ENST00000517386 TAF1LQ8IZX4 1826 aa10.83□□□□□ -0.68
HMBOX1-204ENST00000517386 KIF24Q5T7B8 1368 aa10.82□□□□□ -0.68
HMBOX1-204ENST00000517386 MMP10P09238 476 aa10.82□□□□□ -0.68
HMBOX1-204ENST00000517386 IFNL2Q8IZJ0 200 aa10.82□□□□□ -0.68
HMBOX1-204ENST00000517386 GPBP1L1Q9HC44 474 aaPredicted RBP10.82□□□□□ -0.68
HMBOX1-204ENST00000517386 PKD1L3Q7Z443 1732 aa10.81□□□□□ -0.68
HMBOX1-204ENST00000517386 SSFA2P28290 1259 aa10.81□□□□□ -0.68
HMBOX1-204ENST00000517386 SLC4A9Q96Q91 983 aa10.81□□□□□ -0.68
HMBOX1-204ENST00000517386 MAP2P11137 1827 aaKnown RBP10.81□□□□□ -0.68
HMBOX1-204ENST00000517386 AEBP1Q8IUX7 1158 aa10.8□□□□□ -0.68
HMBOX1-204ENST00000517386 PANK3Q9H999 370 aa10.8□□□□□ -0.68
HMBOX1-204ENST00000517386 UBR3Q6ZT12 1888 aa10.8□□□□□ -0.68
HMBOX1-204ENST00000517386 NCAPD2Q15021 1401 aa10.79□□□□□ -0.68
HMBOX1-204ENST00000517386 A0A0G2JLW4 131 aa10.79□□□□□ -0.68
HMBOX1-204ENST00000517386 PTCD1O75127 700 aaKnown RBP10.79□□□□□ -0.68
HMBOX1-204ENST00000517386 HSPA5P11021 654 aaKnown RBP10.79□□□□□ -0.68
HMBOX1-204ENST00000517386 ZNF530Q6P9A1 599 aaPredicted RBP10.79□□□□□ -0.68
HMBOX1-204ENST00000517386 TRAPPC3LQ5T215 181 aa10.78□□□□□ -0.68
HMBOX1-204ENST00000517386 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP10.78□□□□□ -0.688e-9■□□□□ 10
HMBOX1-204ENST00000517386 BCS1LQ9Y276 419 aa10.78□□□□□ -0.68
HMBOX1-204ENST00000517386 CABP4P57796 275 aa10.77□□□□□ -0.69
HMBOX1-204ENST00000517386 ARHGEF1Q92888 912 aaKnown RBP10.77□□□□□ -0.69
HMBOX1-204ENST00000517386 COLQQ9Y215 455 aaPredicted RBP10.77□□□□□ -0.69
HMBOX1-204ENST00000517386 RTCBQ9Y3I0 505 aaKnown RBP10.77□□□□□ -0.69
HMBOX1-204ENST00000517386 ANKRD26Q9UPS8 1709 aa10.76□□□□□ -0.69
HMBOX1-204ENST00000517386 CNGB1Q14028 1251 aaPredicted RBP10.76□□□□□ -0.69
HMBOX1-204ENST00000517386 PLEKHO1Q53GL0 409 aaPredicted RBP10.76□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms