RNA–Protein interactions for RNA: ENST00000517352.1

TNFRSF11B-202, Transcript of TNF receptor superfamily member 11b, humanhuman

TSL 1 (best)

Gene TNFRSF11B, Length 1,144 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF11B-202ENST00000517352 WASHC2AQ641Q2 1341 aa10.07□□□□□ -0.8
TNFRSF11B-202ENST00000517352 FAM208AQ9UK61 1670 aaKnown RBP10.06□□□□□ -0.8
TNFRSF11B-202ENST00000517352 NSD2O96028 1365 aa10.06□□□□□ -0.8
TNFRSF11B-202ENST00000517352 EIF4G2P78344 907 aaKnown RBP eCLIP10.06□□□□□ -0.8
TNFRSF11B-202ENST00000517352 MORC1Q86VD1 984 aa10.06□□□□□ -0.8
TNFRSF11B-202ENST00000517352 EYA1Q99502 592 aa10.06□□□□□ -0.8
TNFRSF11B-202ENST00000517352 IGSF1Q8N6C5 1336 aa10.06□□□□□ -0.8
TNFRSF11B-202ENST00000517352 PHKG2P15735 406 aa10.05□□□□□ -0.8
TNFRSF11B-202ENST00000517352 MTHFSP49914 203 aa10.05□□□□□ -0.8
TNFRSF11B-202ENST00000517352 NLGN1Q8N2Q7 840 aa10.05□□□□□ -0.8
TNFRSF11B-202ENST00000517352 CCER1Q8TC90 406 aaPredicted RBP10.05□□□□□ -0.8
TNFRSF11B-202ENST00000517352 ASAP1Q9ULH1 1129 aa10.05□□□□□ -0.8
TNFRSF11B-202ENST00000517352 KNSTRNQ9Y448 316 aa10.05□□□□□ -0.8
TNFRSF11B-202ENST00000517352 PARP3Q9Y6F1 533 aa10.05□□□□□ -0.8
TNFRSF11B-202ENST00000517352 GOLGB1Q14789 3259 aaKnown RBP10.04□□□□□ -0.8
TNFRSF11B-202ENST00000517352 USP54Q70EL1 1684 aa10.04□□□□□ -0.8
TNFRSF11B-202ENST00000517352 MMP10P09238 476 aa10.04□□□□□ -0.8
TNFRSF11B-202ENST00000517352 NKX1-1Q15270 411 aaPredicted RBP10.04□□□□□ -0.8
TNFRSF11B-202ENST00000517352 AMOTQ4VCS5 1084 aa10.04□□□□□ -0.8
TNFRSF11B-202ENST00000517352 ZNF530Q6P9A1 599 aaPredicted RBP10.04□□□□□ -0.8
TNFRSF11B-202ENST00000517352 SMIM5Q71RC9 77 aa10.04□□□□□ -0.8
TNFRSF11B-202ENST00000517352 DCAF5Q96JK2 942 aa10.04□□□□□ -0.8
TNFRSF11B-202ENST00000517352 CCDC87Q9NVE4 849 aa10.04□□□□□ -0.8
TNFRSF11B-202ENST00000517352 POLKQ9UBT6 870 aa10.04□□□□□ -0.8
TNFRSF11B-202ENST00000517352 BCS1LQ9Y276 419 aa10.04□□□□□ -0.8
TNFRSF11B-202ENST00000517352 ERVV-2B6SEH9 535 aa10.03□□□□□ -0.8
TNFRSF11B-202ENST00000517352 EIF4A2Q14240 407 aaKnown RBP10.03□□□□□ -0.8
TNFRSF11B-202ENST00000517352 ARHGAP27Q6ZUM4 889 aa10.03□□□□□ -0.8
TNFRSF11B-202ENST00000517352 C16orf71Q8IYS4 520 aaPredicted RBP10.03□□□□□ -0.8
TNFRSF11B-202ENST00000517352 LINC00116Q8NCU8 138 aa10.03□□□□□ -0.8
TNFRSF11B-202ENST00000517352 PANK3Q9H999 370 aa10.03□□□□□ -0.8
TNFRSF11B-202ENST00000517352 PAPPAQ13219 1627 aa10.03□□□□□ -0.8
TNFRSF11B-202ENST00000517352 DOT1LQ8TEK3 1739 aa10.02□□□□□ -0.8
TNFRSF11B-202ENST00000517352 ATP10DQ9P241 1426 aa10.02□□□□□ -0.81
TNFRSF11B-202ENST00000517352 PTCD1O75127 700 aaKnown RBP10.02□□□□□ -0.81
TNFRSF11B-202ENST00000517352 ATG3Q9NT62 314 aa10.02□□□□□ -0.81
TNFRSF11B-202ENST00000517352 FCHSD2O94868 740 aa10.01□□□□□ -0.81
TNFRSF11B-202ENST00000517352 TGFB2P61812 414 aa10.01□□□□□ -0.81
TNFRSF11B-202ENST00000517352 NPM2Q86SE8 214 aaKnown RBP10.01□□□□□ -0.81
TNFRSF11B-202ENST00000517352 A0A0G2JLW4 131 aa10□□□□□ -0.81
TNFRSF11B-202ENST00000517352 ZPR1O75312 459 aa10□□□□□ -0.81
TNFRSF11B-202ENST00000517352 ITPK1Q13572 414 aa10□□□□□ -0.81
TNFRSF11B-202ENST00000517352 CNGB1Q14028 1251 aaPredicted RBP10□□□□□ -0.81
TNFRSF11B-202ENST00000517352 SULT6B1Q6IMI4 303 aa10□□□□□ -0.81
TNFRSF11B-202ENST00000517352 CLSPNQ9HAW4 1339 aa10□□□□□ -0.81
TNFRSF11B-202ENST00000517352 HSPA5P11021 654 aaKnown RBP9.99□□□□□ -0.81
TNFRSF11B-202ENST00000517352 NFATC2IPQ8NCF5 419 aa9.99□□□□□ -0.81
TNFRSF11B-202ENST00000517352 ARHGEF1Q92888 912 aaKnown RBP9.99□□□□□ -0.81
TNFRSF11B-202ENST00000517352 NPHP1O15259 732 aa9.98□□□□□ -0.81
TNFRSF11B-202ENST00000517352 RPS6KA4O75676 772 aa9.98□□□□□ -0.81
TNFRSF11B-202ENST00000517352 HSPA6P17066 643 aa9.98□□□□□ -0.81
TNFRSF11B-202ENST00000517352 RC3H1Q5TC82 1133 aaKnown RBP9.98□□□□□ -0.81
TNFRSF11B-202ENST00000517352 DALRD3Q5D0E6 543 aaKnown RBP9.97□□□□□ -0.81
TNFRSF11B-202ENST00000517352 AMIGO3Q86WK7 504 aa9.97□□□□□ -0.81
TNFRSF11B-202ENST00000517352 PIM2Q9P1W9 311 aa9.97□□□□□ -0.81
TNFRSF11B-202ENST00000517352 CHD4Q14839 1912 aa9.97□□□□□ -0.81
TNFRSF11B-202ENST00000517352 DPEP1P16444 411 aa9.96□□□□□ -0.82
TNFRSF11B-202ENST00000517352 TTC5Q8N0Z6 440 aa9.96□□□□□ -0.82
TNFRSF11B-202ENST00000517352 LY75O60449 1722 aa9.96□□□□□ -0.82
TNFRSF11B-202ENST00000517352 RGPD2P0DJD1 1756 aa9.96□□□□□ -0.82
TNFRSF11B-202ENST00000517352 CRKLP46109 303 aaKnown RBP9.95□□□□□ -0.82
TNFRSF11B-202ENST00000517352 AEBP1Q8IUX7 1158 aa9.95□□□□□ -0.82
TNFRSF11B-202ENST00000517352 CNTNAP4Q9C0A0 1308 aa9.95□□□□□ -0.82
TNFRSF11B-202ENST00000517352 C5P01031 1676 aa9.95□□□□□ -0.82
TNFRSF11B-202ENST00000517352 C4BP0C0L5 1744 aa9.95□□□□□ -0.82
TNFRSF11B-202ENST00000517352 KIF20BQ96Q89 1820 aa9.95□□□□□ -0.82
TNFRSF11B-202ENST00000517352 QSER1Q2KHR3 1735 aa9.94□□□□□ -0.82
TNFRSF11B-202ENST00000517352 KDM2BQ8NHM5 1336 aa9.94□□□□□ -0.82
TNFRSF11B-202ENST00000517352 TOMM70O94826 608 aa9.94□□□□□ -0.82
TNFRSF11B-202ENST00000517352 HMOX1P09601 288 aa9.94□□□□□ -0.82
TNFRSF11B-202ENST00000517352 GYS1P13807 737 aa9.94□□□□□ -0.82
TNFRSF11B-202ENST00000517352 APLP1P51693 650 aa9.94□□□□□ -0.82
TNFRSF11B-202ENST00000517352 AKAP4Q5JQC9 854 aa9.94□□□□□ -0.82
TNFRSF11B-202ENST00000517352 ZNF330Q9Y3S2 320 aaPredicted RBP9.94□□□□□ -0.82
TNFRSF11B-202ENST00000517352 PLEKHG2Q9H7P9 1386 aa9.93□□□□□ -0.82
TNFRSF11B-202ENST00000517352 U2SURPO15042 1029 aaKnown RBP9.93□□□□□ -0.82
TNFRSF11B-202ENST00000517352 C9orf131Q5VYM1 1079 aa9.93□□□□□ -0.82
TNFRSF11B-202ENST00000517352 SRP68Q9UHB9 627 aaKnown RBP9.93□□□□□ -0.82
TNFRSF11B-202ENST00000517352 DIAPH1O60610 1272 aaKnown RBP9.92□□□□□ -0.82
TNFRSF11B-202ENST00000517352 STARD3NLO95772 234 aa9.92□□□□□ -0.82
TNFRSF11B-202ENST00000517352 TEFQ10587 303 aa9.92□□□□□ -0.82
TNFRSF11B-202ENST00000517352 POLA2Q14181 598 aa9.92□□□□□ -0.82
TNFRSF11B-202ENST00000517352 CC2D1BQ5T0F9 858 aaKnown RBP9.92□□□□□ -0.82
TNFRSF11B-202ENST00000517352 IFFO2Q5TF58 517 aa9.92□□□□□ -0.82
TNFRSF11B-202ENST00000517352 RNF181Q9P0P0 153 aa9.92□□□□□ -0.82
TNFRSF11B-202ENST00000517352 CANXP27824 592 aaKnown RBP9.91□□□□□ -0.82
TNFRSF11B-202ENST00000517352 FKBP8Q14318 412 aa9.91□□□□□ -0.82
TNFRSF11B-202ENST00000517352 USPL1Q5W0Q7 1092 aa9.91□□□□□ -0.82
TNFRSF11B-202ENST00000517352 BICDL1Q6ZP65 573 aa9.91□□□□□ -0.82
TNFRSF11B-202ENST00000517352 SLC4A9Q96Q91 983 aa9.91□□□□□ -0.82
TNFRSF11B-202ENST00000517352 SLC52A2Q9HAB3 445 aa9.91□□□□□ -0.82
TNFRSF11B-202ENST00000517352 TAOK2Q9UL54 1235 aa9.91□□□□□ -0.82
TNFRSF11B-202ENST00000517352 SHANK3Q9BYB0 1731 aa9.9□□□□□ -0.82
TNFRSF11B-202ENST00000517352 CEP350Q5VT06 3117 aa9.9□□□□□ -0.82
TNFRSF11B-202ENST00000517352 USP42Q9H9J4 1324 aaKnown RBP9.9□□□□□ -0.82
TNFRSF11B-202ENST00000517352 A0A087WZG4 1122 aa9.9□□□□□ -0.82
TNFRSF11B-202ENST00000517352 H0YIN7 160 aa9.9□□□□□ -0.82
TNFRSF11B-202ENST00000517352 CHRNA5P30532 468 aa9.9□□□□□ -0.82
TNFRSF11B-202ENST00000517352 IL13P35225 146 aa9.9□□□□□ -0.82
TNFRSF11B-202ENST00000517352 DNAJC10Q8IXB1 793 aa9.9□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms