RNA–Protein interactions for RNA: ENST00000516881.1

SCARNA15-202, small Cajal body-specific RNA 15, humanhuman

BASIC

Gene SCARNA15, Length 127 nt, Biotype scaRNA, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA15-202ENST00000516881 DOC2BQ14184 412 aa3.62□□□□□ -1.83
SCARNA15-202ENST00000516881 TMEM214Q6NUQ4 689 aaKnown RBP3.62□□□□□ -1.83
SCARNA15-202ENST00000516881 ALYREFQ86V81 257 aaKnown RBP3.62□□□□□ -1.83
SCARNA15-202ENST00000516881 GOLGA6L1Q8N7Z2 621 aa3.62□□□□□ -1.83
SCARNA15-202ENST00000516881 FAM117AQ9C073 453 aa3.62□□□□□ -1.83
SCARNA15-202ENST00000516881 GPBP1L1Q9HC44 474 aaPredicted RBP3.62□□□□□ -1.83
SCARNA15-202ENST00000516881 GGA1Q9UJY5 639 aa3.62□□□□□ -1.83
SCARNA15-202ENST00000516881 SCO2A0A1W2PP80 73 aa3.61□□□□□ -1.83
SCARNA15-202ENST00000516881 SPATA31C2B4DYI2 1134 aa3.61□□□□□ -1.83
SCARNA15-202ENST00000516881 PIK3R2O00459 728 aa3.61□□□□□ -1.83
SCARNA15-202ENST00000516881 GNB5O14775 395 aa3.61□□□□□ -1.83
SCARNA15-202ENST00000516881 FBXO45P0C2W1 286 aa3.61□□□□□ -1.83
SCARNA15-202ENST00000516881 RFC5P40937 340 aa3.61□□□□□ -1.83
SCARNA15-202ENST00000516881 CENPCQ03188 943 aa3.61□□□□□ -1.83
SCARNA15-202ENST00000516881 WDR44Q5JSH3 913 aa3.61□□□□□ -1.83
SCARNA15-202ENST00000516881 EFHC2Q5JST6 749 aa3.61□□□□□ -1.83
SCARNA15-202ENST00000516881 GNASQ5JWF2 1037 aa3.61□□□□□ -1.83
SCARNA15-202ENST00000516881 CD163Q86VB7 1156 aa3.61□□□□□ -1.83
SCARNA15-202ENST00000516881 CNKSR1Q969H4 720 aa3.61□□□□□ -1.83
SCARNA15-202ENST00000516881 ABHD17AQ96GS6 310 aa3.61□□□□□ -1.83
SCARNA15-202ENST00000516881 DDRGK1Q96HY6 314 aa3.61□□□□□ -1.83
SCARNA15-202ENST00000516881 ZSCAN10Q96SZ4 725 aaPredicted RBP3.61□□□□□ -1.83
SCARNA15-202ENST00000516881 A0A1B0GTH6 734 aa3.6□□□□□ -1.83
SCARNA15-202ENST00000516881 THBS1P07996 1170 aa3.6□□□□□ -1.83
SCARNA15-202ENST00000516881 FGFR3P22607 806 aa3.6□□□□□ -1.83
SCARNA15-202ENST00000516881 CHRNA4P43681 627 aa3.6□□□□□ -1.83
SCARNA15-202ENST00000516881 CTBSQ01459 385 aa3.6□□□□□ -1.83
SCARNA15-202ENST00000516881 ZMYM1Q5SVZ6 1142 aa3.6□□□□□ -1.83
SCARNA15-202ENST00000516881 LINC00114Q6XXX2 140 aa3.6□□□□□ -1.83
SCARNA15-202ENST00000516881 TRIM34Q9BYJ4 488 aa3.6□□□□□ -1.83
SCARNA15-202ENST00000516881 KDM4CQ9H3R0 1056 aa3.6□□□□□ -1.83
SCARNA15-202ENST00000516881 OSBPL3Q9H4L5 887 aa3.6□□□□□ -1.83
SCARNA15-202ENST00000516881 NOP53Q9NZM5 478 aaKnown RBP3.6□□□□□ -1.83
SCARNA15-202ENST00000516881 NEURL1BA8MQ27 555 aa3.59□□□□□ -1.83
SCARNA15-202ENST00000516881 C2CD2LO14523 706 aa3.59□□□□□ -1.83
SCARNA15-202ENST00000516881 MYCP01106 439 aaPredicted RBP3.59□□□□□ -1.83
SCARNA15-202ENST00000516881 IL2RAP01589 272 aa3.59□□□□□ -1.83
SCARNA15-202ENST00000516881 MSX1P28360 303 aa3.59□□□□□ -1.83
SCARNA15-202ENST00000516881 CCDC125Q86Z20 511 aa3.59□□□□□ -1.83
SCARNA15-202ENST00000516881 BTBD6Q96KE9 485 aa3.59□□□□□ -1.83
SCARNA15-202ENST00000516881 ESYT1Q9BSJ8 1104 aa3.59□□□□□ -1.83
SCARNA15-202ENST00000516881 ATXN7L1Q9ULK2 861 aaPredicted RBP3.59□□□□□ -1.83
SCARNA15-202ENST00000516881 ZNF330Q9Y3S2 320 aaPredicted RBP3.59□□□□□ -1.83
SCARNA15-202ENST00000516881 BNIP3LO60238 219 aa3.58□□□□□ -1.84
SCARNA15-202ENST00000516881 GNRH1P01148 92 aa3.58□□□□□ -1.84
SCARNA15-202ENST00000516881 C4orf17Q53FE4 359 aa3.58□□□□□ -1.84
SCARNA15-202ENST00000516881 SLCO4C1Q6ZQN7 724 aa3.58□□□□□ -1.84
SCARNA15-202ENST00000516881 RNF135Q8IUD6 432 aa3.58□□□□□ -1.84
SCARNA15-202ENST00000516881 AIDAQ96BJ3 306 aa3.58□□□□□ -1.84
SCARNA15-202ENST00000516881 DCDC2BA2VCK2 349 aa3.57□□□□□ -1.84
SCARNA15-202ENST00000516881 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.57□□□□□ -1.84
SCARNA15-202ENST00000516881 TRAK2O60296 914 aa3.57□□□□□ -1.84
SCARNA15-202ENST00000516881 EPXP11678 715 aa3.57□□□□□ -1.84
SCARNA15-202ENST00000516881 GATA4P43694 442 aa3.57□□□□□ -1.84
SCARNA15-202ENST00000516881 PLA2G4AP47712 749 aa3.57□□□□□ -1.84
SCARNA15-202ENST00000516881 LBRQ14739 615 aaKnown RBP3.57□□□□□ -1.84
SCARNA15-202ENST00000516881 ESCO1Q5FWF5 840 aa3.57□□□□□ -1.84
SCARNA15-202ENST00000516881 CHSY3Q70JA7 882 aa3.57□□□□□ -1.84
SCARNA15-202ENST00000516881 PCMTD1Q96MG8 357 aaPredicted RBP3.57□□□□□ -1.84
SCARNA15-202ENST00000516881 CDCA7Q9BWT1 371 aaPredicted RBP3.57□□□□□ -1.84
SCARNA15-202ENST00000516881 STAU1O95793 577 aaKnown RBP3.56□□□□□ -1.84
SCARNA15-202ENST00000516881 HOXB4P17483 251 aaPredicted RBP3.56□□□□□ -1.84
SCARNA15-202ENST00000516881 ITGB7P26010 798 aa3.56□□□□□ -1.84
SCARNA15-202ENST00000516881 DGKGP49619 791 aa3.56□□□□□ -1.84
SCARNA15-202ENST00000516881 MCCD1P59942 119 aaPredicted RBP3.56□□□□□ -1.84
SCARNA15-202ENST00000516881 NR1H3Q13133 447 aa3.56□□□□□ -1.84
SCARNA15-202ENST00000516881 UBAP2LQ14157 1087 aaKnown RBP3.56□□□□□ -1.84
SCARNA15-202ENST00000516881 TLR1Q15399 786 aa3.56□□□□□ -1.84
SCARNA15-202ENST00000516881 TMEM259Q4ZIN3 620 aa3.56□□□□□ -1.84
SCARNA15-202ENST00000516881 ARSJQ5FYB0 599 aaPredicted RBP3.56□□□□□ -1.84
SCARNA15-202ENST00000516881 FIGNL1Q6PIW4 674 aa3.56□□□□□ -1.84
SCARNA15-202ENST00000516881 TBC1D9Q6ZT07 1266 aa3.56□□□□□ -1.84
SCARNA15-202ENST00000516881 RHBDD1Q8TEB9 315 aa3.56□□□□□ -1.84
SCARNA15-202ENST00000516881 ZNF592Q92610 1267 aa3.56□□□□□ -1.84
SCARNA15-202ENST00000516881 PLVAPQ9BX97 442 aa3.56□□□□□ -1.84
SCARNA15-202ENST00000516881 KRTAP9-2Q9BYQ4 174 aa3.56□□□□□ -1.84
SCARNA15-202ENST00000516881 KRTAP9-6A0A140TA67 174 aa3.55□□□□□ -1.84
SCARNA15-202ENST00000516881 KHNYNO15037 678 aaKnown RBP3.55□□□□□ -1.84
SCARNA15-202ENST00000516881 ATXN7O15265 892 aaPredicted RBP3.55□□□□□ -1.84
SCARNA15-202ENST00000516881 ARAFP10398 606 aa3.55□□□□□ -1.84
SCARNA15-202ENST00000516881 CD33P20138 364 aa3.55□□□□□ -1.84
SCARNA15-202ENST00000516881 PCBP4P57723 403 aaKnown RBP3.55□□□□□ -1.84
SCARNA15-202ENST00000516881 NBPF11Q86T75 865 aa3.55□□□□□ -1.84
SCARNA15-202ENST00000516881 XAGE2Q96GT9 111 aa3.55□□□□□ -1.84
SCARNA15-202ENST00000516881 ZCCHC2Q9C0B9 1178 aaKnown RBP3.55□□□□□ -1.84
SCARNA15-202ENST00000516881 PRR12Q9ULL5 1215 aa3.55□□□□□ -1.84
SCARNA15-202ENST00000516881 PCDHGC4Q9Y5F7 938 aa3.55□□□□□ -1.84
SCARNA15-202ENST00000516881 GJA3Q9Y6H8 435 aa3.55□□□□□ -1.84
SCARNA15-202ENST00000516881 ADH6P28332 368 aa3.54□□□□□ -1.84
SCARNA15-202ENST00000516881 OXLD1Q5BKU9 147 aa3.54□□□□□ -1.84
SCARNA15-202ENST00000516881 GJD4Q96KN9 370 aaPredicted RBP3.54□□□□□ -1.84
SCARNA15-202ENST00000516881 CCDC85AQ96PX6 553 aaPredicted RBP3.54□□□□□ -1.84
SCARNA15-202ENST00000516881 FHDC1Q9C0D6 1143 aaPredicted RBP3.54□□□□□ -1.84
SCARNA15-202ENST00000516881 FAM229AH3BQW9 127 aa3.53□□□□□ -1.84
SCARNA15-202ENST00000516881 APBA3O96018 575 aa3.53□□□□□ -1.84
SCARNA15-202ENST00000516881 SPATA31C1P0DKV0 1188 aa3.53□□□□□ -1.84
SCARNA15-202ENST00000516881 MAPTP10636 758 aaKnown RBP3.53□□□□□ -1.84
SCARNA15-202ENST00000516881 ALAS2P22557 587 aa3.53□□□□□ -1.84
SCARNA15-202ENST00000516881 USP4Q13107 963 aa3.53□□□□□ -1.84
SCARNA15-202ENST00000516881 PRRT3Q5FWE3 981 aa3.53□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 6.7 ms